BLASTX nr result
ID: Catharanthus22_contig00039872
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Catharanthus22_contig00039872 (260 letters) Database: ./nr 37,332,560 sequences; 13,225,080,153 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value dbj|BAI48085.1| centromere protein C [Nicotiana tomentosiformis] 63 4e-08 dbj|BAI48084.1| centromere protein C homologue [Nicotiana tabacum] 63 4e-08 ref|XP_006343106.1| PREDICTED: uncharacterized protein LOC102577... 62 6e-08 ref|XP_004235698.1| PREDICTED: uncharacterized protein LOC543949... 59 9e-07 gb|AAU04618.1| CENP-C [Solanum tuberosum] 59 9e-07 emb|CBI36186.3| unnamed protein product [Vitis vinifera] 55 1e-05 >dbj|BAI48085.1| centromere protein C [Nicotiana tomentosiformis] Length = 714 Score = 63.2 bits (152), Expect = 4e-08 Identities = 32/61 (52%), Positives = 41/61 (67%) Frame = +1 Query: 76 MVSEPLMSDSIDPLRALSGISLFPRTIRASTDVLPSGTNDLDSVHDFMKSLTMNSPERVM 255 M +E L SD +DPLR L G+SLFP+TIR TDV DL+SVH+FMKSL P ++ Sbjct: 1 MANEALTSDPVDPLRGLVGLSLFPKTIRVCTDV-SVDPKDLESVHNFMKSLETKMPAKLF 59 Query: 256 D 258 + Sbjct: 60 E 60 >dbj|BAI48084.1| centromere protein C homologue [Nicotiana tabacum] Length = 714 Score = 63.2 bits (152), Expect = 4e-08 Identities = 32/61 (52%), Positives = 41/61 (67%) Frame = +1 Query: 76 MVSEPLMSDSIDPLRALSGISLFPRTIRASTDVLPSGTNDLDSVHDFMKSLTMNSPERVM 255 M +E L SD +DPLR L G+SLFP+TIR TDV DL+SVH+FMKSL P ++ Sbjct: 1 MANEALTSDPVDPLRGLVGLSLFPKTIRVCTDV-SVDPKDLESVHNFMKSLETKMPAKLF 59 Query: 256 D 258 + Sbjct: 60 E 60 >ref|XP_006343106.1| PREDICTED: uncharacterized protein LOC102577589 [Solanum tuberosum] Length = 709 Score = 62.4 bits (150), Expect = 6e-08 Identities = 30/57 (52%), Positives = 41/57 (71%), Gaps = 1/57 (1%) Frame = +1 Query: 76 MVSEPLMSDSIDPLRALSGISLFPRTIRASTDVLPS-GTNDLDSVHDFMKSLTMNSP 243 MV+E L+SD +DPL +L+G+SL P T+R STD S DL+S+H+FMKS+ SP Sbjct: 1 MVNEALISDPVDPLHSLAGLSLLPTTVRVSTDASVSVNPKDLESIHNFMKSMETKSP 57 >ref|XP_004235698.1| PREDICTED: uncharacterized protein LOC543949 [Solanum lycopersicum] Length = 709 Score = 58.5 bits (140), Expect = 9e-07 Identities = 28/57 (49%), Positives = 40/57 (70%), Gaps = 1/57 (1%) Frame = +1 Query: 76 MVSEPLMSDSIDPLRALSGISLFPRTIRASTDVLPS-GTNDLDSVHDFMKSLTMNSP 243 MV+E L+SD +DPL +L+G+SL P T+R ST S + DL+S+H+FMKS+ P Sbjct: 1 MVNEALISDPVDPLHSLAGLSLLPTTVRVSTGASVSVDSKDLESIHNFMKSMETKGP 57 >gb|AAU04618.1| CENP-C [Solanum tuberosum] Length = 384 Score = 58.5 bits (140), Expect = 9e-07 Identities = 28/57 (49%), Positives = 39/57 (68%), Gaps = 1/57 (1%) Frame = +1 Query: 76 MVSEPLMSDSIDPLRALSGISLFPRTIRASTDVLPS-GTNDLDSVHDFMKSLTMNSP 243 MV+E L+SD +DPL +L+G+SL P T+R STD S DL+ +H+FMKS+ P Sbjct: 1 MVNEALISDPVDPLHSLAGLSLLPTTVRVSTDASVSVNPKDLELIHNFMKSMETKGP 57 >emb|CBI36186.3| unnamed protein product [Vitis vinifera] Length = 899 Score = 55.1 bits (131), Expect = 1e-05 Identities = 26/62 (41%), Positives = 42/62 (67%), Gaps = 1/62 (1%) Frame = +1 Query: 76 MVSEPLMSDSIDPLRALSGISLFPRTIRASTDVL-PSGTNDLDSVHDFMKSLTMNSPERV 252 M ++ SD DPL G+SLFPRT R S+ V PSG +++DS+H ++KS+ + SP ++ Sbjct: 1 MANDRRSSDLADPLLGYFGLSLFPRTFRDSSTVSKPSGHDNIDSLHSYLKSMALRSPTKL 60 Query: 253 MD 258 ++ Sbjct: 61 LE 62