BLASTX nr result

ID: Catharanthus22_contig00039701 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus22_contig00039701
         (324 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006586558.1| PREDICTED: uncharacterized protein LOC102661...    59   9e-07
gb|EPS61553.1| hypothetical protein M569_13243, partial [Genlise...    58   2e-06
emb|CAN65229.1| hypothetical protein VITISV_011708 [Vitis vinifera]    57   2e-06
dbj|BAA97099.1| retroelement pol polyprotein-like [Arabidopsis t...    57   3e-06
gb|AAD19784.1| putative retroelement pol polyprotein [Arabidopsi...    57   3e-06
gb|AAT40486.1| putative polyprotein [Solanum demissum]                 55   8e-06

>ref|XP_006586558.1| PREDICTED: uncharacterized protein LOC102661920 [Glycine max]
          Length = 516

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 29/58 (50%), Positives = 40/58 (68%), Gaps = 2/58 (3%)
 Frame = -3

Query: 208 HVRKDA--YHLASSDSPHLILTQVHLKEDNYDEWVKAMCLALRAKKKLSFAEGLIPKP 41
           H++K    Y L SSD+P  I+TQV LK +NYDEW +A+  +LRA++K  F +G I KP
Sbjct: 23  HLKKQISPYDLYSSDNPGNIITQVQLKGENYDEWARAVRGSLRARRKFRFVDGSIKKP 80


>gb|EPS61553.1| hypothetical protein M569_13243, partial [Genlisea aurea]
          Length = 131

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 26/54 (48%), Positives = 34/54 (62%)
 Frame = -3

Query: 196 DAYHLASSDSPHLILTQVHLKEDNYDEWVKAMCLALRAKKKLSFAEGLIPKPKP 35
           D ++L   D P L+LT + L+ +NYDEW KAM   LRAKKK  F +G I +  P
Sbjct: 16  DCFNLLPGDHPGLLLTTIQLRGENYDEWAKAMRAGLRAKKKYGFVDGTITERPP 69


>emb|CAN65229.1| hypothetical protein VITISV_011708 [Vitis vinifera]
          Length = 1149

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 27/50 (54%), Positives = 35/50 (70%)
 Frame = -3

Query: 190 YHLASSDSPHLILTQVHLKEDNYDEWVKAMCLALRAKKKLSFAEGLIPKP 41
           Y L S+D+   I+TQV L+ +NYDEW +AM  ALRAKKK  F +G I +P
Sbjct: 15  YSLNSNDNSGNIITQVQLRGENYDEWARAMWTALRAKKKYGFXDGXIKQP 64


>dbj|BAA97099.1| retroelement pol polyprotein-like [Arabidopsis thaliana]
          Length = 1098

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 24/50 (48%), Positives = 36/50 (72%)
 Frame = -3

Query: 190 YHLASSDSPHLILTQVHLKEDNYDEWVKAMCLALRAKKKLSFAEGLIPKP 41
           Y + +SD+P  +++ V LKEDNY EW + +  +L+AK+KL F +G IPKP
Sbjct: 14  YGITASDNPGALISSVILKEDNYSEWAEELMNSLQAKQKLGFLDGTIPKP 63


>gb|AAD19784.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1501

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 25/52 (48%), Positives = 34/52 (65%)
 Frame = -3

Query: 190 YHLASSDSPHLILTQVHLKEDNYDEWVKAMCLALRAKKKLSFAEGLIPKPKP 35
           Y LASSD+P  +++ V L  DNY++W   M  AL+AK+K  F  G IP+P P
Sbjct: 32  YTLASSDNPGAVISSVELNGDNYNQWATEMLNALQAKRKTGFINGTIPRPPP 83


>gb|AAT40486.1| putative polyprotein [Solanum demissum]
          Length = 1065

 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 28/51 (54%), Positives = 34/51 (66%)
 Frame = -3

Query: 190 YHLASSDSPHLILTQVHLKEDNYDEWVKAMCLALRAKKKLSFAEGLIPKPK 38
           Y L S+D   + +T V LK  NY+EW KAM  A RAKKKL F +GLI +PK
Sbjct: 8   YFLLSADHTGICITPVVLKGYNYEEWAKAMRNAFRAKKKLGFIDGLITQPK 58


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