BLASTX nr result
ID: Catharanthus22_contig00039637
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus22_contig00039637
(326 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004241167.1| PREDICTED: pentatricopeptide repeat-containi... 173 2e-41
ref|XP_006350917.1| PREDICTED: pentatricopeptide repeat-containi... 172 5e-41
gb|EMJ07625.1| hypothetical protein PRUPE_ppa001946mg [Prunus pe... 159 5e-37
ref|XP_002314110.1| pentatricopeptide repeat-containing family p... 158 6e-37
ref|XP_006480615.1| PREDICTED: pentatricopeptide repeat-containi... 158 8e-37
ref|XP_006428806.1| hypothetical protein CICLE_v10011151mg [Citr... 158 8e-37
gb|EOY33741.1| Tetratricopeptide repeat (TPR)-like superfamily p... 158 8e-37
gb|EXC01449.1| hypothetical protein L484_022020 [Morus notabilis] 157 1e-36
emb|CAN72716.1| hypothetical protein VITISV_032470 [Vitis vinifera] 157 1e-36
ref|XP_002279360.1| PREDICTED: pentatricopeptide repeat-containi... 157 1e-36
ref|XP_002525630.1| pentatricopeptide repeat-containing protein,... 152 6e-35
ref|XP_004145320.1| PREDICTED: pentatricopeptide repeat-containi... 150 2e-34
ref|XP_004295750.1| PREDICTED: pentatricopeptide repeat-containi... 149 4e-34
gb|EPS69071.1| hypothetical protein M569_05691, partial [Genlise... 144 2e-32
ref|XP_006575137.1| PREDICTED: pentatricopeptide repeat-containi... 142 4e-32
ref|XP_003520267.1| PREDICTED: pentatricopeptide repeat-containi... 142 4e-32
ref|XP_006410036.1| hypothetical protein EUTSA_v10016305mg [Eutr... 137 1e-30
ref|XP_002879234.1| predicted protein [Arabidopsis lyrata subsp.... 135 7e-30
ref|NP_180537.1| RNA editing factor OTP81 [Arabidopsis thaliana]... 133 2e-29
ref|XP_006293749.1| hypothetical protein CARUB_v10022711mg [Caps... 125 6e-27
>ref|XP_004241167.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Solanum lycopersicum]
Length = 744
Score = 173 bits (438), Expect = 2e-41
Identities = 77/108 (71%), Positives = 97/108 (89%)
Frame = +2
Query: 2 DVVSWNSMIVGFAQGGYADQALELFHGMEEENLRPNDVTMIGVLSACGMKMDLQFGRWVH 181
DVVSWN+MI+GFA+GGYAD+AL++FH M EEN+RPNDVTM+ VLSAC K+DL+FGRWVH
Sbjct: 202 DVVSWNTMILGFAEGGYADEALKIFHRMGEENVRPNDVTMMAVLSACAKKLDLEFGRWVH 261
Query: 182 SYIKRKGIKGNLILNNAILDMYVKCGSVADAKRFFDKMEDKDVVSWTT 325
++IKR GI+ +LIL+NAILDMY+KCGS+ DA+R F KM +KD+VSWTT
Sbjct: 262 AFIKRNGIRESLILDNAILDMYMKCGSIEDAERLFRKMGEKDIVSWTT 309
Score = 92.0 bits (227), Expect = 7e-17
Identities = 42/108 (38%), Positives = 66/108 (61%), Gaps = 1/108 (0%)
Frame = +2
Query: 2 DVVSWNSMIVGFAQGGYADQALELFHGMEE-ENLRPNDVTMIGVLSACGMKMDLQFGRWV 178
D+V+WN++I + Q G +AL +F+ ++ + P++VT++ LSAC + G W+
Sbjct: 334 DIVAWNALISAYEQSGKPKEALSVFNELQLIKKAEPDEVTLVCALSACAQLGAIDLGGWI 393
Query: 179 HSYIKRKGIKGNLILNNAILDMYVKCGSVADAKRFFDKMEDKDVVSWT 322
H YIK++GIK N L A++DMY KCG V A FD + +DV W+
Sbjct: 394 HVYIKKQGIKFNCHLTTALIDMYSKCGDVEKALEMFDSVNIRDVFVWS 441
>ref|XP_006350917.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Solanum tuberosum]
Length = 744
Score = 172 bits (435), Expect = 5e-41
Identities = 77/108 (71%), Positives = 96/108 (88%)
Frame = +2
Query: 2 DVVSWNSMIVGFAQGGYADQALELFHGMEEENLRPNDVTMIGVLSACGMKMDLQFGRWVH 181
DVVSWN+MI+GFA+GGYAD+AL++FH M EEN+RPN VTM+ VLSACG K+DL+FGRWVH
Sbjct: 202 DVVSWNTMILGFAEGGYADEALKMFHRMGEENVRPNGVTMMAVLSACGKKLDLEFGRWVH 261
Query: 182 SYIKRKGIKGNLILNNAILDMYVKCGSVADAKRFFDKMEDKDVVSWTT 325
+IKR GI+ +LIL+NAILDMY+KCGS+ DA+R F KM +KD+VSWTT
Sbjct: 262 VFIKRNGIRESLILDNAILDMYMKCGSIEDAERLFHKMGEKDIVSWTT 309
Score = 90.1 bits (222), Expect = 3e-16
Identities = 41/108 (37%), Positives = 65/108 (60%), Gaps = 1/108 (0%)
Frame = +2
Query: 2 DVVSWNSMIVGFAQGGYADQALELFHGMEE-ENLRPNDVTMIGVLSACGMKMDLQFGRWV 178
D+ +WN++I + Q G +AL +F+ ++ + P++VT++ LSAC + G W+
Sbjct: 334 DIAAWNALISAYEQSGKPKEALSVFNELQLIKKAEPDEVTLVCALSACAQLGAIDLGGWI 393
Query: 179 HSYIKRKGIKGNLILNNAILDMYVKCGSVADAKRFFDKMEDKDVVSWT 322
H YIK++GIK N L A++DMY KCG V A FD + +DV W+
Sbjct: 394 HVYIKKQGIKLNCHLTTALIDMYSKCGDVEKALEMFDSVNIRDVFVWS 441
>gb|EMJ07625.1| hypothetical protein PRUPE_ppa001946mg [Prunus persica]
Length = 738
Score = 159 bits (401), Expect = 5e-37
Identities = 76/108 (70%), Positives = 88/108 (81%)
Frame = +2
Query: 2 DVVSWNSMIVGFAQGGYADQALELFHGMEEENLRPNDVTMIGVLSACGMKMDLQFGRWVH 181
DVVSWNSMI FAQG +ALELF ME EN++PNDVTM+ VLSAC K+DL+FGRWV
Sbjct: 196 DVVSWNSMITVFAQGNCPQEALELFKEMEAENVKPNDVTMVSVLSACAKKVDLEFGRWVC 255
Query: 182 SYIKRKGIKGNLILNNAILDMYVKCGSVADAKRFFDKMEDKDVVSWTT 325
S+I+R IK NL LNNA+LDMYVKCGSV DAKR FD+M +KD+VSWTT
Sbjct: 256 SHIQRNEIKENLTLNNAMLDMYVKCGSVDDAKRLFDRMPEKDIVSWTT 303
Score = 84.0 bits (206), Expect = 2e-14
Identities = 36/108 (33%), Positives = 67/108 (62%), Gaps = 1/108 (0%)
Frame = +2
Query: 2 DVVSWNSMIVGFAQGGYADQALELFHGMEE-ENLRPNDVTMIGVLSACGMKMDLQFGRWV 178
D+ +WN +I + Q G +AL +F+ +++ ++ +P++VT++ L+AC + G W+
Sbjct: 328 DIAAWNVLISSYEQSGKPKEALAVFNELQKSKSPKPDEVTLVSTLAACAQLGAIDLGGWI 387
Query: 179 HSYIKRKGIKGNLILNNAILDMYVKCGSVADAKRFFDKMEDKDVVSWT 322
H YIK++ +K N L +++DMY KCG + A F+ +E +DV W+
Sbjct: 388 HVYIKKQVMKLNCHLTTSLIDMYAKCGDLDKALEVFNSVERRDVFVWS 435
>ref|XP_002314110.1| pentatricopeptide repeat-containing family protein [Populus
trichocarpa] gi|222850518|gb|EEE88065.1|
pentatricopeptide repeat-containing family protein
[Populus trichocarpa]
Length = 738
Score = 158 bits (400), Expect = 6e-37
Identities = 73/108 (67%), Positives = 89/108 (82%)
Frame = +2
Query: 2 DVVSWNSMIVGFAQGGYADQALELFHGMEEENLRPNDVTMIGVLSACGMKMDLQFGRWVH 181
D+VSWNSMI GF QGG ++AL+LF M+ EN RPN VTM+GVLSAC ++DL+FGRW
Sbjct: 196 DIVSWNSMISGFVQGGSPEEALQLFKRMKMENARPNRVTMVGVLSACAKRIDLEFGRWAC 255
Query: 182 SYIKRKGIKGNLILNNAILDMYVKCGSVADAKRFFDKMEDKDVVSWTT 325
YI+R GI NLIL+NA+LDMYVKCGS+ DA+R FDKME+KD+VSWTT
Sbjct: 256 DYIERNGIDINLILSNAMLDMYVKCGSLEDARRLFDKMEEKDIVSWTT 303
Score = 89.7 bits (221), Expect = 4e-16
Identities = 39/108 (36%), Positives = 65/108 (60%), Gaps = 1/108 (0%)
Frame = +2
Query: 2 DVVSWNSMIVGFAQGGYADQALELFHGME-EENLRPNDVTMIGVLSACGMKMDLQFGRWV 178
D+ +WN++I + Q G +AL +F ++ +N +PN+VT+ L+AC + G W+
Sbjct: 328 DITAWNALISSYQQNGKPKEALAIFRELQLNKNTKPNEVTLASTLAACAQLGAMDLGGWI 387
Query: 179 HSYIKRKGIKGNLILNNAILDMYVKCGSVADAKRFFDKMEDKDVVSWT 322
H YIK++GIK N + +++DMY KCG + A F +E +DV W+
Sbjct: 388 HVYIKKQGIKLNFHITTSLIDMYSKCGHLEKALEVFYSVERRDVFVWS 435
Score = 55.8 bits (133), Expect = 6e-06
Identities = 31/109 (28%), Positives = 54/109 (49%), Gaps = 1/109 (0%)
Frame = +2
Query: 2 DVVSWNSMIVGFAQGGYADQALELFHGMEEENLR-PNDVTMIGVLSACGMKMDLQFGRWV 178
++ +WN++I FA Q L +F M E+ R PN T V+ A L G+ +
Sbjct: 94 NLYTWNTLIRAFASSPKPIQGLLVFIQMLHESQRFPNSYTFPFVIKAATEVSSLLAGQAI 153
Query: 179 HSYIKRKGIKGNLILNNAILDMYVKCGSVADAKRFFDKMEDKDVVSWTT 325
H + + +L ++N+++ Y G + A F K+ +KD+VSW +
Sbjct: 154 HGMVMKASFGSDLFISNSLIHFYSSLGDLDSAYLVFSKIVEKDIVSWNS 202
>ref|XP_006480615.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Citrus sinensis]
Length = 746
Score = 158 bits (399), Expect = 8e-37
Identities = 72/108 (66%), Positives = 91/108 (84%)
Frame = +2
Query: 2 DVVSWNSMIVGFAQGGYADQALELFHGMEEENLRPNDVTMIGVLSACGMKMDLQFGRWVH 181
DVVSWNSMI GF QGG+ ++A+EL+ ME EN++P++VTM+ VLSAC K DL+FGRWV
Sbjct: 205 DVVSWNSMISGFVQGGFFEKAIELYREMEMENVKPDEVTMVAVLSACAKKRDLEFGRWVC 264
Query: 182 SYIKRKGIKGNLILNNAILDMYVKCGSVADAKRFFDKMEDKDVVSWTT 325
SYI++ GIK +L L+NA+LDMYVKCGS+ DAK FDKME+KD+VSWTT
Sbjct: 265 SYIEKNGIKMDLTLSNAMLDMYVKCGSLEDAKSLFDKMEEKDIVSWTT 312
Score = 88.2 bits (217), Expect = 1e-15
Identities = 37/107 (34%), Positives = 65/107 (60%)
Frame = +2
Query: 5 VVSWNSMIVGFAQGGYADQALELFHGMEEENLRPNDVTMIGVLSACGMKMDLQFGRWVHS 184
+ +WN++I + Q G ++AL +FH +N+ P++ T + VLSAC + G +H+
Sbjct: 338 IATWNALISAYEQNGKPNEALSIFHEQLSKNVNPDEFTFVSVLSACAQLGAMDIGVQIHA 397
Query: 185 YIKRKGIKGNLILNNAILDMYVKCGSVADAKRFFDKMEDKDVVSWTT 325
+K++GIK N L +++DMY KCG++ A F ++ +DV W+T
Sbjct: 398 KMKKQGIKLNCYLTTSLIDMYTKCGNLDKALEVFHTVKSRDVFVWST 444
Score = 55.1 bits (131), Expect = 1e-05
Identities = 33/99 (33%), Positives = 51/99 (51%), Gaps = 1/99 (1%)
Frame = +2
Query: 2 DVVSWNSMIVGFAQGGYADQALELFHGMEEENLRPNDVTMIGVLSACGMKMDLQFGRWVH 181
DV W++MI GFA G AL+LF M+E ++PN VT VL AC + GR
Sbjct: 438 DVFVWSTMIAGFAMYGRGRDALDLFSRMQEAKVKPNAVTFTNVLCACSHSGLVDEGRMFF 497
Query: 182 SYIKR-KGIKGNLILNNAILDMYVKCGSVADAKRFFDKM 295
+ ++ G+ + ++DM + G + +A F +KM
Sbjct: 498 NQMEPVYGVVPGVKHYTCMVDMLGRAGLLDEAVEFIEKM 536
>ref|XP_006428806.1| hypothetical protein CICLE_v10011151mg [Citrus clementina]
gi|557530863|gb|ESR42046.1| hypothetical protein
CICLE_v10011151mg [Citrus clementina]
Length = 737
Score = 158 bits (399), Expect = 8e-37
Identities = 72/108 (66%), Positives = 91/108 (84%)
Frame = +2
Query: 2 DVVSWNSMIVGFAQGGYADQALELFHGMEEENLRPNDVTMIGVLSACGMKMDLQFGRWVH 181
DVVSWNSMI GF QGG+ ++A+EL+ ME EN++P++VTM+ VLSAC K DL+FGRWV
Sbjct: 196 DVVSWNSMISGFVQGGFFEKAIELYREMEMENVKPDEVTMVAVLSACAKKRDLEFGRWVC 255
Query: 182 SYIKRKGIKGNLILNNAILDMYVKCGSVADAKRFFDKMEDKDVVSWTT 325
SYI++ GIK +L L+NA+LDMYVKCGS+ DAK FDKME+KD+VSWTT
Sbjct: 256 SYIEKNGIKMDLTLSNAMLDMYVKCGSLEDAKSLFDKMEEKDIVSWTT 303
Score = 88.2 bits (217), Expect = 1e-15
Identities = 37/107 (34%), Positives = 65/107 (60%)
Frame = +2
Query: 5 VVSWNSMIVGFAQGGYADQALELFHGMEEENLRPNDVTMIGVLSACGMKMDLQFGRWVHS 184
+ +WN++I + Q G ++AL +FH +N+ P++ T + VLSAC + G +H+
Sbjct: 329 IATWNALISAYEQNGKPNEALSIFHEQLSKNVNPDEFTFVSVLSACAQLGAMDIGVQIHA 388
Query: 185 YIKRKGIKGNLILNNAILDMYVKCGSVADAKRFFDKMEDKDVVSWTT 325
+K++GIK N L +++DMY KCG++ A F ++ +DV W+T
Sbjct: 389 KMKKQGIKLNCYLTTSLIDMYTKCGNLDKALEVFHTVKSRDVFVWST 435
>gb|EOY33741.1| Tetratricopeptide repeat (TPR)-like superfamily protein [Theobroma
cacao]
Length = 733
Score = 158 bits (399), Expect = 8e-37
Identities = 73/108 (67%), Positives = 90/108 (83%)
Frame = +2
Query: 2 DVVSWNSMIVGFAQGGYADQALELFHGMEEENLRPNDVTMIGVLSACGMKMDLQFGRWVH 181
DVVSWNS+I G AQ G A++ALELF M+ E+++PNDVTM+GVLSAC K+DL+FGRWV
Sbjct: 191 DVVSWNSLITGLAQKGCAEKALELFRRMDAESVKPNDVTMVGVLSACTKKLDLEFGRWVC 250
Query: 182 SYIKRKGIKGNLILNNAILDMYVKCGSVADAKRFFDKMEDKDVVSWTT 325
SYI+R GI NL L+NA+LDMY KCGS+ DAKR FD ME+KD+V+WTT
Sbjct: 251 SYIERNGISVNLTLSNAMLDMYAKCGSLEDAKRLFDMMEEKDIVTWTT 298
Score = 89.0 bits (219), Expect = 6e-16
Identities = 38/108 (35%), Positives = 67/108 (62%), Gaps = 1/108 (0%)
Frame = +2
Query: 2 DVVSWNSMIVGFAQGGYADQALELFHGMEEENL-RPNDVTMIGVLSACGMKMDLQFGRWV 178
D+ +WN++I G+ Q G +AL ++H ++ + +P+++T++ LSAC + GR +
Sbjct: 323 DIAAWNALISGYEQNGKPKEALAIYHELKLSKIAKPDEITLVSTLSACAQLGAMDIGRGI 382
Query: 179 HSYIKRKGIKGNLILNNAILDMYVKCGSVADAKRFFDKMEDKDVVSWT 322
H+Y+K +GI+ N L +++DMY KCG V A F +E +DV W+
Sbjct: 383 HAYVKEQGIQLNCHLTTSLIDMYSKCGDVNKALEVFYSVERRDVFVWS 430
Score = 57.0 bits (136), Expect = 3e-06
Identities = 29/109 (26%), Positives = 60/109 (55%), Gaps = 1/109 (0%)
Frame = +2
Query: 2 DVVSWNSMIVGFAQGGYADQALELFHGMEEEN-LRPNDVTMIGVLSACGMKMDLQFGRWV 178
++ +WN++I +A G Q + +F M +E+ PN T V+ A + + G+ +
Sbjct: 89 NLYTWNTLIRVYASGPEPLQGILIFLRMVDESPYYPNKFTFPFVIKAAAEIVSVCVGQAL 148
Query: 179 HSYIKRKGIKGNLILNNAILDMYVKCGSVADAKRFFDKMEDKDVVSWTT 325
H + + + ++ ++N+++ +Y+ CG + A R F + +KDVVSW +
Sbjct: 149 HGMVIKASLGADVFISNSLIHLYLSCGDLDSAYRVFMMIGEKDVVSWNS 197
>gb|EXC01449.1| hypothetical protein L484_022020 [Morus notabilis]
Length = 739
Score = 157 bits (398), Expect = 1e-36
Identities = 73/108 (67%), Positives = 86/108 (79%)
Frame = +2
Query: 2 DVVSWNSMIVGFAQGGYADQALELFHGMEEENLRPNDVTMIGVLSACGMKMDLQFGRWVH 181
DVVSWNSMI F +G D+A +LF ME ENL+PND+TM+GVL ACG K D++FGRW+
Sbjct: 197 DVVSWNSMIKAFVEGDCPDEAFQLFREMEMENLKPNDITMVGVLCACGKKADIEFGRWLC 256
Query: 182 SYIKRKGIKGNLILNNAILDMYVKCGSVADAKRFFDKMEDKDVVSWTT 325
SYI+R GI NL LNNA+LDMYVKCGSV DAK FDKM ++DVVSWTT
Sbjct: 257 SYIQRNGIAVNLTLNNAMLDMYVKCGSVEDAKELFDKMPERDVVSWTT 304
Score = 99.4 bits (246), Expect = 5e-19
Identities = 44/108 (40%), Positives = 68/108 (62%), Gaps = 1/108 (0%)
Frame = +2
Query: 2 DVVSWNSMIVGFAQGGYADQALELFHGME-EENLRPNDVTMIGVLSACGMKMDLQFGRWV 178
D+ +WN +I + Q G +AL +FH ++ ++ +P++VT++ LSAC + GRW+
Sbjct: 329 DIAAWNVLISSYEQNGMPKEALSVFHKLQVSKSAKPDEVTLVSSLSACSQLGSIDPGRWI 388
Query: 179 HSYIKRKGIKGNLILNNAILDMYVKCGSVADAKRFFDKMEDKDVVSWT 322
H YIKR+GIK N L +++DMY KCG + A FD +E KDV W+
Sbjct: 389 HIYIKRQGIKLNCHLTTSLIDMYAKCGDLEKALEVFDSVERKDVYVWS 436
>emb|CAN72716.1| hypothetical protein VITISV_032470 [Vitis vinifera]
Length = 694
Score = 157 bits (398), Expect = 1e-36
Identities = 72/108 (66%), Positives = 86/108 (79%)
Frame = +2
Query: 2 DVVSWNSMIVGFAQGGYADQALELFHGMEEENLRPNDVTMIGVLSACGMKMDLQFGRWVH 181
DVVSWNSMI F QGG ++ALELF ME +N++PN +TM+GVLSAC K D +FGRWVH
Sbjct: 201 DVVSWNSMITAFVQGGCPEEALELFQEMETQNVKPNGITMVGVLSACAKKSDFEFGRWVH 260
Query: 182 SYIKRKGIKGNLILNNAILDMYVKCGSVADAKRFFDKMEDKDVVSWTT 325
SYI+R I +L L+NA+LDMY KCGSV DAKR FDKM +KD+VSWTT
Sbjct: 261 SYIERNRIXESLTLSNAMLDMYTKCGSVEDAKRLFDKMPEKDIVSWTT 308
>ref|XP_002279360.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 743
Score = 157 bits (397), Expect = 1e-36
Identities = 72/108 (66%), Positives = 86/108 (79%)
Frame = +2
Query: 2 DVVSWNSMIVGFAQGGYADQALELFHGMEEENLRPNDVTMIGVLSACGMKMDLQFGRWVH 181
DVVSWNSMI F QGG ++ALELF ME +N++PN +TM+GVLSAC K D +FGRWVH
Sbjct: 201 DVVSWNSMITAFVQGGCPEEALELFQEMETQNVKPNGITMVGVLSACAKKSDFEFGRWVH 260
Query: 182 SYIKRKGIKGNLILNNAILDMYVKCGSVADAKRFFDKMEDKDVVSWTT 325
SYI+R I +L L+NA+LDMY KCGSV DAKR FDKM +KD+VSWTT
Sbjct: 261 SYIERNRIGESLTLSNAMLDMYTKCGSVEDAKRLFDKMPEKDIVSWTT 308
Score = 94.7 bits (234), Expect = 1e-17
Identities = 42/108 (38%), Positives = 67/108 (62%), Gaps = 1/108 (0%)
Frame = +2
Query: 2 DVVSWNSMIVGFAQGGYADQALELFHGME-EENLRPNDVTMIGVLSACGMKMDLQFGRWV 178
D+ +WN++I + Q G +ALELFH ++ + +P++VT++ LSAC + G W+
Sbjct: 333 DIAAWNALISAYEQCGKPKEALELFHELQLSKTAKPDEVTLVSTLSACAQLGAMDLGGWI 392
Query: 179 HSYIKRKGIKGNLILNNAILDMYVKCGSVADAKRFFDKMEDKDVVSWT 322
H YIK++G+K N L +++DMY KCG + A F +E KDV W+
Sbjct: 393 HVYIKKQGMKLNCHLTTSLIDMYCKCGDLQKALMVFHSVERKDVFVWS 440
>ref|XP_002525630.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223535066|gb|EEF36748.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 765
Score = 152 bits (383), Expect = 6e-35
Identities = 74/108 (68%), Positives = 87/108 (80%)
Frame = +2
Query: 2 DVVSWNSMIVGFAQGGYADQALELFHGMEEENLRPNDVTMIGVLSACGMKMDLQFGRWVH 181
DVVSWNSMI GF GG D+ALELF M+ EN+RPNDVTM+GVLSAC KMDL+FGR V
Sbjct: 197 DVVSWNSMIKGFVLGGCPDKALELFQLMKAENVRPNDVTMVGVLSACAKKMDLEFGRRVC 256
Query: 182 SYIKRKGIKGNLILNNAILDMYVKCGSVADAKRFFDKMEDKDVVSWTT 325
YI+R GI NL ++NA+LDMYVK GS+ DA+R FDKME+KD+ SWTT
Sbjct: 257 HYIERNGINVNLTVSNAMLDMYVKNGSLEDARRLFDKMEEKDIFSWTT 304
Score = 86.7 bits (213), Expect = 3e-15
Identities = 39/108 (36%), Positives = 64/108 (59%), Gaps = 1/108 (0%)
Frame = +2
Query: 2 DVVSWNSMIVGFAQGGYADQALELFHGME-EENLRPNDVTMIGVLSACGMKMDLQFGRWV 178
D+ +WN +I + Q G +AL +FH ++ + +P++VT++ LSAC + G W+
Sbjct: 329 DISAWNVLISAYEQDGKPKEALAIFHELQLSKTAKPDEVTLVSTLSACAQLGAIDIGGWI 388
Query: 179 HSYIKRKGIKGNLILNNAILDMYVKCGSVADAKRFFDKMEDKDVVSWT 322
H YIK++ IK N L +++DMY KCG V A F ++ +DV W+
Sbjct: 389 HVYIKKQDIKLNCHLTTSLIDMYSKCGEVEKALDIFYSVDRRDVFVWS 436
>ref|XP_004145320.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
gi|449470513|ref|XP_004152961.1| PREDICTED:
pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
gi|449523079|ref|XP_004168552.1| PREDICTED:
pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
Length = 733
Score = 150 bits (378), Expect = 2e-34
Identities = 72/107 (67%), Positives = 85/107 (79%)
Frame = +2
Query: 2 DVVSWNSMIVGFAQGGYADQALELFHGMEEENLRPNDVTMIGVLSACGMKMDLQFGRWVH 181
DVVSWNSMI FAQG + ALELF ME EN+ PN VTM+GVLSAC K+DL+FGRWV
Sbjct: 191 DVVSWNSMISAFAQGNCPEDALELFLKMERENVMPNSVTMVGVLSACAKKLDLEFGRWVC 250
Query: 182 SYIKRKGIKGNLILNNAILDMYVKCGSVADAKRFFDKMEDKDVVSWT 322
SYI+RKGIK +L L NA+LDMY KCGSV DA++ FD+M ++DV SWT
Sbjct: 251 SYIERKGIKVDLTLCNAMLDMYTKCGSVDDAQKLFDEMPERDVFSWT 297
Score = 87.4 bits (215), Expect = 2e-15
Identities = 39/108 (36%), Positives = 67/108 (62%), Gaps = 1/108 (0%)
Frame = +2
Query: 2 DVVSWNSMIVGFAQGGYADQALELFHGMEEENL-RPNDVTMIGVLSACGMKMDLQFGRWV 178
++ +WN +I + Q G +AL +F+ ++ + +P++VT++ LSAC + G W+
Sbjct: 323 EIAAWNVLISAYEQNGKPKEALAIFNELQLSKIAKPDEVTLVSTLSACAQLGAIDLGGWI 382
Query: 179 HSYIKRKGIKGNLILNNAILDMYVKCGSVADAKRFFDKMEDKDVVSWT 322
H YIKR+GI N L ++++DMY KCGS+ A F +E++DV W+
Sbjct: 383 HVYIKREGIVLNCHLISSLVDMYAKCGSLEKALEVFYSVEERDVYVWS 430
>ref|XP_004295750.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Fragaria vesca subsp. vesca]
Length = 1049
Score = 149 bits (376), Expect = 4e-34
Identities = 69/108 (63%), Positives = 85/108 (78%)
Frame = +2
Query: 2 DVVSWNSMIVGFAQGGYADQALELFHGMEEENLRPNDVTMIGVLSACGMKMDLQFGRWVH 181
DVVSWNS+I FAQG + ALELF ME EN++PNDVT++ VLSAC DL+FGRWV
Sbjct: 252 DVVSWNSVITAFAQGNCPEVALELFKEMEAENMKPNDVTLVSVLSACAKMADLEFGRWVC 311
Query: 182 SYIKRKGIKGNLILNNAILDMYVKCGSVADAKRFFDKMEDKDVVSWTT 325
S+++R G++ NL LNNA+LDMY KCGSV DA+R F +M +KDVVSWTT
Sbjct: 312 SHVERHGVEENLTLNNAMLDMYAKCGSVEDAERLFGRMPEKDVVSWTT 359
Score = 89.7 bits (221), Expect = 4e-16
Identities = 37/108 (34%), Positives = 67/108 (62%), Gaps = 1/108 (0%)
Frame = +2
Query: 2 DVVSWNSMIVGFAQGGYADQALELFHGMEE-ENLRPNDVTMIGVLSACGMKMDLQFGRWV 178
D+ +WN +I + Q G +AL +FH +++ + +P++VT++ L+AC + G W+
Sbjct: 384 DIATWNVLISSYEQNGKPKEALAVFHELQKNKGPKPDEVTLVSTLAACSQLGAIDLGGWI 443
Query: 179 HSYIKRKGIKGNLILNNAILDMYVKCGSVADAKRFFDKMEDKDVVSWT 322
H Y+K++G+K N L +++DMY KCG++ A F+ E +DV W+
Sbjct: 444 HVYVKKQGMKLNCHLTTSLIDMYAKCGNLEKALEVFNSAETRDVFVWS 491
>gb|EPS69071.1| hypothetical protein M569_05691, partial [Genlisea aurea]
Length = 726
Score = 144 bits (362), Expect = 2e-32
Identities = 65/112 (58%), Positives = 83/112 (74%), Gaps = 4/112 (3%)
Frame = +2
Query: 2 DVVSWNSMIVGFAQGGYADQALELFHGM----EEENLRPNDVTMIGVLSACGMKMDLQFG 169
DVVSWNSMI G Q + D A+ELFH M EEE + PN VTM+ VL CG K DL+ G
Sbjct: 178 DVVSWNSMINGLVQNKWHDDAMELFHRMVAEEEEEGVEPNGVTMLSVLGICGTKSDLELG 237
Query: 170 RWVHSYIKRKGIKGNLILNNAILDMYVKCGSVADAKRFFDKMEDKDVVSWTT 325
+W HSY+ + G++G+LIL+NAILDMY KCG + +A+ FDKMED+DV++WTT
Sbjct: 238 KWAHSYVNKNGMEGSLILDNAILDMYTKCGGMKEAREVFDKMEDRDVITWTT 289
Score = 80.1 bits (196), Expect = 3e-13
Identities = 36/110 (32%), Positives = 66/110 (60%), Gaps = 3/110 (2%)
Frame = +2
Query: 2 DVVSWNSMIVGFAQGGYADQALELFHGMEEEN--LRPNDVTMIGVLSACGMKMDLQFGRW 175
D+ SWN++I + Q G A +A+ +F+ +++ N P+ VT++ LSAC ++ G
Sbjct: 314 DITSWNALISAYEQRGNAKEAIAIFNELQQSNNDTEPDGVTLVSTLSACSQLGAIELGTR 373
Query: 176 VHSYIKRKGIKGNLILNNAILDMYVKCGSVADAKRFF-DKMEDKDVVSWT 322
+H+Y+K++G+ N L +++DMY KCG + A + F ++DV W+
Sbjct: 374 IHNYVKKRGMSLNCHLVTSLIDMYSKCGDLEKAAQVFRSSSHERDVFVWS 423
>ref|XP_006575137.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like isoform X2 [Glycine max]
Length = 695
Score = 142 bits (359), Expect = 4e-32
Identities = 66/108 (61%), Positives = 84/108 (77%)
Frame = +2
Query: 2 DVVSWNSMIVGFAQGGYADQALELFHGMEEENLRPNDVTMIGVLSACGMKMDLQFGRWVH 181
DVVSWN+MI FA GG D+AL LF ME ++++PN +TM+ VLSAC K+DL+FGRW+
Sbjct: 153 DVVSWNAMINAFALGGLPDKALLLFQEMEMKDVKPNVITMVSVLSACAKKIDLEFGRWIC 212
Query: 182 SYIKRKGIKGNLILNNAILDMYVKCGSVADAKRFFDKMEDKDVVSWTT 325
SYI+ G +LILNNA+LDMYVKCG + DAK F+KM +KD+VSWTT
Sbjct: 213 SYIENNGFTEHLILNNAMLDMYVKCGCINDAKDLFNKMSEKDIVSWTT 260
Score = 83.2 bits (204), Expect = 3e-14
Identities = 41/105 (39%), Positives = 61/105 (58%), Gaps = 1/105 (0%)
Frame = +2
Query: 11 SWNSMIVGFAQGGYADQALELFHGME-EENLRPNDVTMIGVLSACGMKMDLQFGRWVHSY 187
+WN++I + Q G AL LFH M+ ++ +P++VT+I L A + FG W+H Y
Sbjct: 288 AWNALISAYEQNGKPRVALSLFHEMQLSKDAKPDEVTLICALCASAQLGAIDFGHWIHVY 347
Query: 188 IKRKGIKGNLILNNAILDMYVKCGSVADAKRFFDKMEDKDVVSWT 322
IK+ I N L ++LDMY KCG++ A F +E KDV W+
Sbjct: 348 IKKHDINLNCHLATSLLDMYAKCGNLNKAMEVFHAVERKDVYVWS 392
>ref|XP_003520267.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like isoform X1 [Glycine max]
Length = 780
Score = 142 bits (359), Expect = 4e-32
Identities = 66/108 (61%), Positives = 84/108 (77%)
Frame = +2
Query: 2 DVVSWNSMIVGFAQGGYADQALELFHGMEEENLRPNDVTMIGVLSACGMKMDLQFGRWVH 181
DVVSWN+MI FA GG D+AL LF ME ++++PN +TM+ VLSAC K+DL+FGRW+
Sbjct: 238 DVVSWNAMINAFALGGLPDKALLLFQEMEMKDVKPNVITMVSVLSACAKKIDLEFGRWIC 297
Query: 182 SYIKRKGIKGNLILNNAILDMYVKCGSVADAKRFFDKMEDKDVVSWTT 325
SYI+ G +LILNNA+LDMYVKCG + DAK F+KM +KD+VSWTT
Sbjct: 298 SYIENNGFTEHLILNNAMLDMYVKCGCINDAKDLFNKMSEKDIVSWTT 345
Score = 83.2 bits (204), Expect = 3e-14
Identities = 41/105 (39%), Positives = 61/105 (58%), Gaps = 1/105 (0%)
Frame = +2
Query: 11 SWNSMIVGFAQGGYADQALELFHGME-EENLRPNDVTMIGVLSACGMKMDLQFGRWVHSY 187
+WN++I + Q G AL LFH M+ ++ +P++VT+I L A + FG W+H Y
Sbjct: 373 AWNALISAYEQNGKPRVALSLFHEMQLSKDAKPDEVTLICALCASAQLGAIDFGHWIHVY 432
Query: 188 IKRKGIKGNLILNNAILDMYVKCGSVADAKRFFDKMEDKDVVSWT 322
IK+ I N L ++LDMY KCG++ A F +E KDV W+
Sbjct: 433 IKKHDINLNCHLATSLLDMYAKCGNLNKAMEVFHAVERKDVYVWS 477
>ref|XP_006410036.1| hypothetical protein EUTSA_v10016305mg [Eutrema salsugineum]
gi|557111205|gb|ESQ51489.1| hypothetical protein
EUTSA_v10016305mg [Eutrema salsugineum]
Length = 739
Score = 137 bits (346), Expect = 1e-30
Identities = 68/108 (62%), Positives = 80/108 (74%)
Frame = +2
Query: 2 DVVSWNSMIVGFAQGGYADQALELFHGMEEENLRPNDVTMIGVLSACGMKMDLQFGRWVH 181
DVVSWNSMI GF Q G D+ALELF ME E ++ + VTM+GVLSAC +L+FGR V
Sbjct: 197 DVVSWNSMITGFVQKGSPDKALELFKKMESEEVKASHVTMVGVLSACAKLRNLEFGRQVC 256
Query: 182 SYIKRKGIKGNLILNNAILDMYVKCGSVADAKRFFDKMEDKDVVSWTT 325
SYI+ G+K NL L NA+LDMY KCGS+ DAKR FD ME KD V+WTT
Sbjct: 257 SYIEENGVKMNLTLANAMLDMYTKCGSIEDAKRLFDTMEVKDNVTWTT 304
Score = 102 bits (255), Expect = 4e-20
Identities = 42/108 (38%), Positives = 73/108 (67%), Gaps = 1/108 (0%)
Frame = +2
Query: 2 DVVSWNSMIVGFAQGGYADQALELFHGME-EENLRPNDVTMIGVLSACGMKMDLQFGRWV 178
D+V+WN++I + Q G ++AL +FH ++ ++N++ N +T++ LSAC L+ GRW+
Sbjct: 329 DIVAWNALISAYEQNGKPNEALLVFHELQLQKNIKLNQITLVSTLSACAQVGALELGRWI 388
Query: 179 HSYIKRKGIKGNLILNNAILDMYVKCGSVADAKRFFDKMEDKDVVSWT 322
HSYIK+ GI+ N + +A++ MY KCG + A+ F+ +E +DV W+
Sbjct: 389 HSYIKKHGIRSNFYVTSALIHMYSKCGDLVKAREVFNTVEKRDVFVWS 436
>ref|XP_002879234.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297325073|gb|EFH55493.1| predicted protein
[Arabidopsis lyrata subsp. lyrata]
Length = 740
Score = 135 bits (339), Expect = 7e-30
Identities = 67/108 (62%), Positives = 80/108 (74%)
Frame = +2
Query: 2 DVVSWNSMIVGFAQGGYADQALELFHGMEEENLRPNDVTMIGVLSACGMKMDLQFGRWVH 181
DVVSWNSMI GF Q G D+ALELF ME E+++ + VTM+GVLSAC DL+FGR V
Sbjct: 198 DVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRDLEFGRRVC 257
Query: 182 SYIKRKGIKGNLILNNAILDMYVKCGSVADAKRFFDKMEDKDVVSWTT 325
SYI+ + NL L NA+LDMY KCGS+ DAKR FD ME+KD V+WTT
Sbjct: 258 SYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTT 305
Score = 103 bits (256), Expect = 3e-20
Identities = 43/108 (39%), Positives = 73/108 (67%), Gaps = 1/108 (0%)
Frame = +2
Query: 2 DVVSWNSMIVGFAQGGYADQALELFHGME-EENLRPNDVTMIGVLSACGMKMDLQFGRWV 178
D+V+WN++I + Q G ++AL +FH ++ ++N++ N +T++ LSAC L+ GRW+
Sbjct: 330 DIVAWNALISAYEQNGKPNEALLVFHELQLQKNIKLNQITLVSTLSACAQVGALELGRWI 389
Query: 179 HSYIKRKGIKGNLILNNAILDMYVKCGSVADAKRFFDKMEDKDVVSWT 322
HSYIK+ GIK N + +A++ MY KCG + A+ F+ +E +DV W+
Sbjct: 390 HSYIKKNGIKMNFYVTSALIHMYSKCGDLEKAREVFNSVEKRDVFVWS 437
>ref|NP_180537.1| RNA editing factor OTP81 [Arabidopsis thaliana]
gi|75100656|sp|O82380.1|PP175_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At2g29760, chloroplastic; Flags: Precursor
gi|3582328|gb|AAC35225.1| hypothetical protein
[Arabidopsis thaliana] gi|330253207|gb|AEC08301.1| RNA
editing factor OTP81 [Arabidopsis thaliana]
Length = 738
Score = 133 bits (335), Expect = 2e-29
Identities = 66/108 (61%), Positives = 80/108 (74%)
Frame = +2
Query: 2 DVVSWNSMIVGFAQGGYADQALELFHGMEEENLRPNDVTMIGVLSACGMKMDLQFGRWVH 181
DVVSWNSMI GF Q G D+ALELF ME E+++ + VTM+GVLSAC +L+FGR V
Sbjct: 196 DVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVC 255
Query: 182 SYIKRKGIKGNLILNNAILDMYVKCGSVADAKRFFDKMEDKDVVSWTT 325
SYI+ + NL L NA+LDMY KCGS+ DAKR FD ME+KD V+WTT
Sbjct: 256 SYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTT 303
Score = 99.8 bits (247), Expect = 3e-19
Identities = 41/108 (37%), Positives = 73/108 (67%), Gaps = 1/108 (0%)
Frame = +2
Query: 2 DVVSWNSMIVGFAQGGYADQALELFHGME-EENLRPNDVTMIGVLSACGMKMDLQFGRWV 178
D+V+WN++I + Q G ++AL +FH ++ ++N++ N +T++ LSAC L+ GRW+
Sbjct: 328 DIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWI 387
Query: 179 HSYIKRKGIKGNLILNNAILDMYVKCGSVADAKRFFDKMEDKDVVSWT 322
HSYIK+ GI+ N + +A++ MY KCG + ++ F+ +E +DV W+
Sbjct: 388 HSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWS 435
>ref|XP_006293749.1| hypothetical protein CARUB_v10022711mg [Capsella rubella]
gi|482562457|gb|EOA26647.1| hypothetical protein
CARUB_v10022711mg [Capsella rubella]
Length = 739
Score = 125 bits (314), Expect = 6e-27
Identities = 62/108 (57%), Positives = 80/108 (74%)
Frame = +2
Query: 2 DVVSWNSMIVGFAQGGYADQALELFHGMEEENLRPNDVTMIGVLSACGMKMDLQFGRWVH 181
DVVSWNSMI GF Q G D+ALELF ME E+++ + VTM+GVLSAC +L+FGR V
Sbjct: 197 DVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACTKLRNLEFGRQVC 256
Query: 182 SYIKRKGIKGNLILNNAILDMYVKCGSVADAKRFFDKMEDKDVVSWTT 325
S+I+ + N+ L NA+LDMY KCGS+ +AKR FD ME+KD V++TT
Sbjct: 257 SFIEENRVNVNMTLANAMLDMYTKCGSIEEAKRLFDTMEEKDNVTFTT 304
Score = 100 bits (250), Expect = 2e-19
Identities = 42/108 (38%), Positives = 73/108 (67%), Gaps = 1/108 (0%)
Frame = +2
Query: 2 DVVSWNSMIVGFAQGGYADQALELFHGME-EENLRPNDVTMIGVLSACGMKMDLQFGRWV 178
D+V+WN++I + Q G ++AL +FH ++ ++N++ N +T++ LSAC L+ GRW+
Sbjct: 329 DIVAWNALISAYEQNGKPNEALLVFHELQLQKNIKLNQITLVSTLSACAQVGALELGRWI 388
Query: 179 HSYIKRKGIKGNLILNNAILDMYVKCGSVADAKRFFDKMEDKDVVSWT 322
HSYIK+ GI+ N + +A++ MY KCG + A+ F+ +E +DV W+
Sbjct: 389 HSYIKKHGIRMNFYITSALIHMYSKCGDLEKAREVFNCVEKRDVFVWS 436