BLASTX nr result

ID: Catharanthus22_contig00039452 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus22_contig00039452
         (754 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006342149.1| PREDICTED: protein canopy-1-like isoform X3 ...    57   9e-06
ref|XP_006342147.1| PREDICTED: protein canopy-1-like isoform X1 ...    57   9e-06
ref|XP_003603847.1| Canopy-like protein [Medicago truncatula] gi...    57   9e-06

>ref|XP_006342149.1| PREDICTED: protein canopy-1-like isoform X3 [Solanum tuberosum]
          Length = 223

 Score = 56.6 bits (135), Expect = 9e-06
 Identities = 32/63 (50%), Positives = 40/63 (63%)
 Frame = +1

Query: 373 HTQKPSSFCGSNAAVLQLEYYWLICNTQQM*KQLSELIKKGTVKVGDVNKVLCEDLSKYC 552
           H++  SSFCG            L+  T+    +L+ELIKKG+VKVGDV KVLCEDLS YC
Sbjct: 158 HSKAMSSFCGR-----------LLEQTED---ELAELIKKGSVKVGDVTKVLCEDLSNYC 203

Query: 553 QQT 561
           + T
Sbjct: 204 KGT 206


>ref|XP_006342147.1| PREDICTED: protein canopy-1-like isoform X1 [Solanum tuberosum]
           gi|565350382|ref|XP_006342148.1| PREDICTED: protein
           canopy-1-like isoform X2 [Solanum tuberosum]
          Length = 224

 Score = 56.6 bits (135), Expect = 9e-06
 Identities = 32/63 (50%), Positives = 40/63 (63%)
 Frame = +1

Query: 373 HTQKPSSFCGSNAAVLQLEYYWLICNTQQM*KQLSELIKKGTVKVGDVNKVLCEDLSKYC 552
           H++  SSFCG            L+  T+    +L+ELIKKG+VKVGDV KVLCEDLS YC
Sbjct: 158 HSKAMSSFCGR-----------LLEQTED---ELAELIKKGSVKVGDVTKVLCEDLSNYC 203

Query: 553 QQT 561
           + T
Sbjct: 204 KGT 206


>ref|XP_003603847.1| Canopy-like protein [Medicago truncatula]
           gi|355492895|gb|AES74098.1| Canopy-like protein
           [Medicago truncatula] gi|388499672|gb|AFK37902.1|
           unknown [Medicago truncatula]
          Length = 180

 Score = 56.6 bits (135), Expect = 9e-06
 Identities = 31/63 (49%), Positives = 42/63 (66%)
 Frame = +1

Query: 373 HTQKPSSFCGSNAAVLQLEYYWLICNTQQM*KQLSELIKKGTVKVGDVNKVLCEDLSKYC 552
           H++  SS+CG            L+  T+    +L+ELIKKG+VKVGDV+KVLC+DLSK+C
Sbjct: 118 HSKDISSYCGR-----------LLEETED---ELAELIKKGSVKVGDVSKVLCQDLSKHC 163

Query: 553 QQT 561
            QT
Sbjct: 164 DQT 166


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