BLASTX nr result
ID: Catharanthus22_contig00039282
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus22_contig00039282
(508 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006344596.1| PREDICTED: pentatricopeptide repeat-containi... 233 2e-59
ref|XP_004235463.1| PREDICTED: pentatricopeptide repeat-containi... 227 1e-57
ref|XP_006478286.1| PREDICTED: pentatricopeptide repeat-containi... 220 2e-55
ref|XP_006441856.1| hypothetical protein CICLE_v10019688mg [Citr... 219 2e-55
ref|XP_002264078.2| PREDICTED: pentatricopeptide repeat-containi... 219 3e-55
gb|EOY02331.1| Pentatricopeptide repeat (PPR) superfamily protei... 218 9e-55
ref|XP_006376104.1| hypothetical protein POPTR_0013s09580g [Popu... 212 4e-53
ref|XP_002529628.1| pentatricopeptide repeat-containing protein,... 201 1e-49
ref|XP_004141609.1| PREDICTED: pentatricopeptide repeat-containi... 198 7e-49
gb|EMJ02163.1| hypothetical protein PRUPE_ppa004156mg [Prunus pe... 194 1e-47
ref|XP_003549152.1| PREDICTED: pentatricopeptide repeat-containi... 182 4e-44
gb|EPS69424.1| hypothetical protein M569_05340 [Genlisea aurea] 180 2e-43
gb|ESW24420.1| hypothetical protein PHAVU_004G129300g [Phaseolus... 167 2e-39
ref|XP_003619586.1| hypothetical protein MTR_6g059820 [Medicago ... 161 7e-38
ref|NP_174603.1| pentatricopeptide repeat-containing protein [Ar... 158 8e-37
ref|XP_006415097.1| hypothetical protein EUTSA_v10009638mg [Eutr... 154 9e-36
ref|XP_002891041.1| pentatricopeptide repeat-containing protein ... 154 9e-36
ref|XP_006306508.1| hypothetical protein CARUB_v10012498mg [Caps... 153 3e-35
ref|XP_002338705.1| predicted protein [Populus trichocarpa] 114 1e-23
ref|NP_001047457.1| Os02g0620800 [Oryza sativa Japonica Group] g... 110 1e-22
>ref|XP_006344596.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g33350-like [Solanum tuberosum]
Length = 528
Score = 233 bits (595), Expect = 2e-59
Identities = 110/166 (66%), Positives = 133/166 (80%)
Frame = +1
Query: 10 NLNNHVLAVLDKCNHFNQLRQLQAFLITLGHGQTQFYVFKIVRFCAIKLSNLTYARLIFD 189
NL++ +L +LDKC QL+QLQ LIT+GHGQTQ Y FK+VRFC I LSNL+Y RLIF+
Sbjct: 6 NLHHDILVILDKCRSLTQLKQLQGHLITIGHGQTQLYAFKLVRFCTIFLSNLSYGRLIFN 65
Query: 190 QLKFPNIYLYTAMITAYTSLQDHCSSLLLYREMVRQGNPEPNHFIYPLVLKSSPEVVKPY 369
+ PN+YLYTAMITAYTSL +H SSLLLYREMVR G +PN F++P++LKS PEV KPY
Sbjct: 66 YITVPNVYLYTAMITAYTSLPNHKSSLLLYREMVRSGLSKPNQFVFPIILKSFPEVTKPY 125
Query: 370 GTEMVHAQIEKLGFGKYPVVETALLDVYSRFCADIGVARRAFDEMS 507
G +M IEK+GFGKYPVV+TALLD YSRF +DI VAR+ FDE+S
Sbjct: 126 GVDMAQTHIEKMGFGKYPVVQTALLDAYSRFSSDIRVARQLFDEIS 171
>ref|XP_004235463.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g33350-like [Solanum lycopersicum]
Length = 528
Score = 227 bits (578), Expect = 1e-57
Identities = 107/166 (64%), Positives = 130/166 (78%)
Frame = +1
Query: 10 NLNNHVLAVLDKCNHFNQLRQLQAFLITLGHGQTQFYVFKIVRFCAIKLSNLTYARLIFD 189
NL+ +L +L+KC QL+QLQ LIT+GHGQTQ Y FK+VR C I LSNL Y RLIF+
Sbjct: 6 NLHQDILFILEKCRSLTQLKQLQGHLITIGHGQTQLYAFKLVRLCTIYLSNLNYGRLIFN 65
Query: 190 QLKFPNIYLYTAMITAYTSLQDHCSSLLLYREMVRQGNPEPNHFIYPLVLKSSPEVVKPY 369
+ PN+YLYTAMITAYTSL ++ SS+LLYREMVR G +PN F++P++LKS PEV KPY
Sbjct: 66 YITVPNVYLYTAMITAYTSLPNYKSSILLYREMVRSGLSKPNQFVFPIILKSFPEVTKPY 125
Query: 370 GTEMVHAQIEKLGFGKYPVVETALLDVYSRFCADIGVARRAFDEMS 507
G M H IEK+GFGKYPVV+TALLD YSRF +DI VAR+ FDE+S
Sbjct: 126 GVGMAHTHIEKMGFGKYPVVQTALLDTYSRFSSDIRVARQLFDEIS 171
>ref|XP_006478286.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g33350-like [Citrus sinensis]
Length = 529
Score = 220 bits (560), Expect = 2e-55
Identities = 109/166 (65%), Positives = 128/166 (77%), Gaps = 1/166 (0%)
Frame = +1
Query: 13 LNNHVLAVLDKCNHFNQLRQLQAFLITLGHGQTQFYVFKIVRFCAIKLSNLTYARLIFDQ 192
LN VLA+L++CNH N L+QLQ+FL TLG QT FY FK+VRFC +KLSNLTYAR IFD
Sbjct: 12 LNQQVLAILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFIFDH 71
Query: 193 LKFPNIYLYTAMITAYTSLQDHCSSLL-LYREMVRQGNPEPNHFIYPLVLKSSPEVVKPY 369
L PN YLYTAMITAY S H SS LYR+MVR+G P+PN FIYP VLKS P+V++
Sbjct: 72 LTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESR 131
Query: 370 GTEMVHAQIEKLGFGKYPVVETALLDVYSRFCADIGVARRAFDEMS 507
GT+MVH QI K GF +YPVVETAL++ YSR DIG+AR+ FDEMS
Sbjct: 132 GTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMS 177
>ref|XP_006441856.1| hypothetical protein CICLE_v10019688mg [Citrus clementina]
gi|557544118|gb|ESR55096.1| hypothetical protein
CICLE_v10019688mg [Citrus clementina]
Length = 529
Score = 219 bits (559), Expect = 2e-55
Identities = 109/166 (65%), Positives = 129/166 (77%), Gaps = 1/166 (0%)
Frame = +1
Query: 13 LNNHVLAVLDKCNHFNQLRQLQAFLITLGHGQTQFYVFKIVRFCAIKLSNLTYARLIFDQ 192
LN VLA+L++CNH N L+QLQ+FL TLG QT FY FK+VRFC +KLSNLTYAR+IFD
Sbjct: 12 LNQQVLAILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARVIFDH 71
Query: 193 LKFPNIYLYTAMITAYTSLQDHCSSLL-LYREMVRQGNPEPNHFIYPLVLKSSPEVVKPY 369
L PN YLYTAMITAY S H SS LYR+MVR+G P+PNHFIYP VLKS P+V++
Sbjct: 72 LTTPNTYLYTAMITAYASEPVHASSAFSLYRDMVRRGQPQPNHFIYPHVLKSCPDVLESR 131
Query: 370 GTEMVHAQIEKLGFGKYPVVETALLDVYSRFCADIGVARRAFDEMS 507
GT+MVH QI GF +YPVVETAL++ YSR DIG+AR+ FDEMS
Sbjct: 132 GTKMVHTQIVISGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMS 177
>ref|XP_002264078.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g33350-like [Vitis vinifera]
Length = 573
Score = 219 bits (558), Expect = 3e-55
Identities = 106/166 (63%), Positives = 127/166 (76%)
Frame = +1
Query: 10 NLNNHVLAVLDKCNHFNQLRQLQAFLITLGHGQTQFYVFKIVRFCAIKLSNLTYARLIFD 189
NLNN VLA+L++C H N L+QLQAFLITLGH QT FY FK++RFC + LSNL+YAR IFD
Sbjct: 53 NLNNSVLALLERCIHLNHLKQLQAFLITLGHAQTHFYAFKLLRFCTLALSNLSYARFIFD 112
Query: 190 QLKFPNIYLYTAMITAYTSLQDHCSSLLLYREMVRQGNPEPNHFIYPLVLKSSPEVVKPY 369
++ PN+YLYTAMITAY S DH S+LLLYR MVR+ P PNHFIYP VLKS +VV P
Sbjct: 113 HVESPNVYLYTAMITAYASHSDHTSALLLYRNMVRRRRPWPNHFIYPHVLKSCTQVVGPG 172
Query: 370 GTEMVHAQIEKLGFGKYPVVETALLDVYSRFCADIGVARRAFDEMS 507
MVH Q+ + GF +YPVV+TALLD Y RF +D+ AR FDEM+
Sbjct: 173 SARMVHCQVLRSGFEQYPVVQTALLDAYLRFWSDVESARLLFDEMT 218
>gb|EOY02331.1| Pentatricopeptide repeat (PPR) superfamily protein [Theobroma
cacao]
Length = 527
Score = 218 bits (554), Expect = 9e-55
Identities = 102/166 (61%), Positives = 131/166 (78%), Gaps = 1/166 (0%)
Frame = +1
Query: 13 LNNHVLAVLDKCNHFNQLRQLQAFLITLGHGQTQFYVFKIVRFCAIKLSNLTYARLIFDQ 192
LN HVL +L+KCNH N L+QLQ+FLIT GH +TQFY+FK+VRFC +K+ N YARL+FD
Sbjct: 9 LNQHVLGILEKCNHLNHLKQLQSFLITQGHSRTQFYIFKLVRFCTLKIFNFCYARLLFDH 68
Query: 193 LKFPNIYLYTAMITAYTSLQD-HCSSLLLYREMVRQGNPEPNHFIYPLVLKSSPEVVKPY 369
L PNIYLYTAMITAY S + H S+ LYR M+ +G P PNHFIYP VLKS+PEV++ +
Sbjct: 69 LYAPNIYLYTAMITAYASHPNHHTSAFALYRHMLCKGKPTPNHFIYPHVLKSAPEVLESH 128
Query: 370 GTEMVHAQIEKLGFGKYPVVETALLDVYSRFCADIGVARRAFDEMS 507
GT+++H+QI K GFG+YPVV+TAL+D Y+R + G+AR FDEM+
Sbjct: 129 GTQLIHSQIFKSGFGQYPVVQTALVDSYARTGSSTGIARDLFDEMA 174
>ref|XP_006376104.1| hypothetical protein POPTR_0013s09580g [Populus trichocarpa]
gi|550325368|gb|ERP53901.1| hypothetical protein
POPTR_0013s09580g [Populus trichocarpa]
Length = 525
Score = 212 bits (540), Expect = 4e-53
Identities = 102/166 (61%), Positives = 128/166 (77%)
Frame = +1
Query: 10 NLNNHVLAVLDKCNHFNQLRQLQAFLITLGHGQTQFYVFKIVRFCAIKLSNLTYARLIFD 189
NLN VL+++ KCNH N L+QLQ+FL LGH QT FY FK++R C ++L+NL YAR IF+
Sbjct: 11 NLNQRVLSIVSKCNHLNHLKQLQSFLTILGHSQTNFYTFKLIRCCLLQLNNLYYARFIFN 70
Query: 190 QLKFPNIYLYTAMITAYTSLQDHCSSLLLYREMVRQGNPEPNHFIYPLVLKSSPEVVKPY 369
+FPNIYLYTAM+TAY S+QDH SS L+R M+R+G+P+PNHF++P VLK
Sbjct: 71 NFEFPNIYLYTAMVTAYASIQDHQSSFDLFRFMLRRGHPKPNHFLFPHVLKYCQV----- 125
Query: 370 GTEMVHAQIEKLGFGKYPVVETALLDVYSRFCADIGVARRAFDEMS 507
T+ VHAQIEKLGFG+YPVV+TAL+D YSR DIG+ARR FDEMS
Sbjct: 126 -TKFVHAQIEKLGFGQYPVVQTALIDSYSRSGYDIGIARRMFDEMS 170
>ref|XP_002529628.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223530913|gb|EEF32773.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 400
Score = 201 bits (510), Expect = 1e-49
Identities = 99/167 (59%), Positives = 125/167 (74%), Gaps = 1/167 (0%)
Frame = +1
Query: 10 NLNNHVLAVLDKCNHFNQLRQLQAFLITLGHGQTQFYVFKIVRFCAIKLSNLTYARLIFD 189
NLN LA+L KCN+ N L+QLQ++L +GH QTQFY FK+VRFC + LSN YAR IF+
Sbjct: 7 NLNQLALAILSKCNNLNHLKQLQSYLTVIGHSQTQFYSFKLVRFCILNLSNFNYARYIFN 66
Query: 190 QLKFPNIYLYTAMITAYTSLQD-HCSSLLLYREMVRQGNPEPNHFIYPLVLKSSPEVVKP 366
L PNIYL+TA++TAY S D H S+ LYR+MVR+ +P+PNHFI+P VLKS
Sbjct: 67 HLHSPNIYLFTALVTAYASNPDHHLSAFELYRDMVRRAHPKPNHFIFPHVLKSC------ 120
Query: 367 YGTEMVHAQIEKLGFGKYPVVETALLDVYSRFCADIGVARRAFDEMS 507
T++VH+QI KLGF +YPVV+TAL+D YSRF +DIG AR+ FDEMS
Sbjct: 121 QNTKVVHSQIAKLGFSQYPVVQTALVDSYSRFMSDIGCARQVFDEMS 167
>ref|XP_004141609.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g33350-like [Cucumis sativus]
gi|449510706|ref|XP_004163739.1| PREDICTED:
pentatricopeptide repeat-containing protein
At1g33350-like [Cucumis sativus]
Length = 563
Score = 198 bits (503), Expect = 7e-49
Identities = 96/165 (58%), Positives = 124/165 (75%)
Frame = +1
Query: 10 NLNNHVLAVLDKCNHFNQLRQLQAFLITLGHGQTQFYVFKIVRFCAIKLSNLTYARLIFD 189
+LN +A L+KC++ N L+QLQ FLI+ GH QTQF+ FK+VRFC + L++L YAR IFD
Sbjct: 41 HLNQLFVAALEKCSNLNHLKQLQGFLISHGHSQTQFFAFKLVRFCNLTLADLCYARYIFD 100
Query: 190 QLKFPNIYLYTAMITAYTSLQDHCSSLLLYREMVRQGNPEPNHFIYPLVLKSSPEVVKPY 369
L PN++LYTAMITAY S D ++ LLYR MVR+G PN+FIYP VL+S P+V+
Sbjct: 101 NLTSPNVFLYTAMITAYASYPDPKAAFLLYRNMVRRGAIRPNNFIYPHVLRSCPDVLGSN 160
Query: 370 GTEMVHAQIEKLGFGKYPVVETALLDVYSRFCADIGVARRAFDEM 504
T+MVH Q+ K GFG YPVV+TA++D YSRF +DIG AR+ FDEM
Sbjct: 161 ATKMVHTQVLKSGFGGYPVVQTAIVDSYSRFSSDIGSARQMFDEM 205
>gb|EMJ02163.1| hypothetical protein PRUPE_ppa004156mg [Prunus persica]
Length = 526
Score = 194 bits (493), Expect = 1e-47
Identities = 96/168 (57%), Positives = 118/168 (70%)
Frame = +1
Query: 4 LFNLNNHVLAVLDKCNHFNQLRQLQAFLITLGHGQTQFYVFKIVRFCAIKLSNLTYARLI 183
+ NLN +L KC N ++QLQ F+ITLG+ Q Q Y FK+VRFC + L NL Y RLI
Sbjct: 1 MVNLNQ----LLAKCKSLNHVKQLQVFIITLGYTQNQLYAFKLVRFCLVTLDNLPYGRLI 56
Query: 184 FDQLKFPNIYLYTAMITAYTSLQDHCSSLLLYREMVRQGNPEPNHFIYPLVLKSSPEVVK 363
FD L PN+YL+ AMIT YTS H S+ LLY M+RQG+ PN FIYP VLKS PEV +
Sbjct: 57 FDCLSSPNVYLFAAMITGYTSQSHHRSAFLLYESMLRQGSARPNQFIYPHVLKSCPEVFE 116
Query: 364 PYGTEMVHAQIEKLGFGKYPVVETALLDVYSRFCADIGVARRAFDEMS 507
+GT +V I K GFG+YPVV+TAL+D YSRF +D+G AR+ FDEMS
Sbjct: 117 SHGTALVQTHIMKSGFGQYPVVQTALVDSYSRFRSDVGSARQVFDEMS 164
>ref|XP_003549152.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g33350-like [Glycine max]
Length = 522
Score = 182 bits (462), Expect = 4e-44
Identities = 93/167 (55%), Positives = 115/167 (68%), Gaps = 1/167 (0%)
Frame = +1
Query: 10 NLNNHVLAVLDKCNHFNQLRQLQAFLITLGHGQTQFYVFKIVRFCAIKLSNLTYARLIFD 189
NLN HVL L K NH N L+QLQA+L TLGH T FY FK++RFC + LSNLTYARLIFD
Sbjct: 4 NLNEHVLDTLSKSNHLNHLKQLQAYLTTLGHAHTHFYAFKLIRFCTLTLSNLTYARLIFD 63
Query: 190 QLKFPNIYLYTAMITAYTS-LQDHCSSLLLYREMVRQGNPEPNHFIYPLVLKSSPEVVKP 366
+ N +L+TAMITAY + H S+L L+R M+R P PNHFI+P LK+ PE
Sbjct: 64 HIPSLNTHLFTAMITAYAAHPATHPSALSLFRHMLRSQPPRPNHFIFPHALKTCPE---S 120
Query: 367 YGTEMVHAQIEKLGFGKYPVVETALLDVYSRFCADIGVARRAFDEMS 507
E +HAQI K GF +YPVV+TAL+D YS+ +G A++ FDEMS
Sbjct: 121 CAAESLHAQIVKSGFHEYPVVQTALVDSYSKVSGGLGNAKKVFDEMS 167
>gb|EPS69424.1| hypothetical protein M569_05340 [Genlisea aurea]
Length = 521
Score = 180 bits (457), Expect = 2e-43
Identities = 79/157 (50%), Positives = 114/157 (72%)
Frame = +1
Query: 37 LDKCNHFNQLRQLQAFLITLGHGQTQFYVFKIVRFCAIKLSNLTYARLIFDQLKFPNIYL 216
+++C + ++QLQA L LGHG T FY FK++R C I+L+NL YAR + D+ PN+Y+
Sbjct: 1 MERCRSLDHVKQLQAHLAILGHGHTHFYAFKLIRLCTIRLANLRYARCLLDKFFSPNVYM 60
Query: 217 YTAMITAYTSLQDHCSSLLLYREMVRQGNPEPNHFIYPLVLKSSPEVVKPYGTEMVHAQI 396
Y A+I++Y S+ DH S++LLYR+M+R PNHFI+ +LKS E+++ YG E VHAQ+
Sbjct: 61 YAAVISSYASVSDHESAVLLYRDMLRGSRSRPNHFIFSSILKSWAELLRGYGAESVHAQV 120
Query: 397 EKLGFGKYPVVETALLDVYSRFCADIGVARRAFDEMS 507
K+G+G Y V TA+LD YSR+ AD+ +AR+ FDEMS
Sbjct: 121 AKMGYGGYQAVRTAILDAYSRYKADVRIARKVFDEMS 157
>gb|ESW24420.1| hypothetical protein PHAVU_004G129300g [Phaseolus vulgaris]
Length = 522
Score = 167 bits (422), Expect = 2e-39
Identities = 85/167 (50%), Positives = 112/167 (67%), Gaps = 1/167 (0%)
Frame = +1
Query: 10 NLNNHVLAVLDKCNHFNQLRQLQAFLITLGHGQTQFYVFKIVRFCAIKLSNLTYARLIFD 189
NLN HVL L KCN N L+QLQ +L TLGH T FY FK++RFCA+ LSNL+YA LIF
Sbjct: 4 NLNEHVLETLSKCNDLNHLKQLQGYLTTLGHAHTHFYAFKLLRFCALTLSNLSYAHLIFH 63
Query: 190 QLKFPNIYLYTAMITAYTS-LQDHCSSLLLYREMVRQGNPEPNHFIYPLVLKSSPEVVKP 366
PN +L+TA+ITAY + +H S+L+L+R M+R + PN FI+P LK+ P+
Sbjct: 64 HHPSPNTHLFTAIITAYAAHPANHPSALILFRHMLRSQSTRPNQFIFPHALKACPD---S 120
Query: 367 YGTEMVHAQIEKLGFGKYPVVETALLDVYSRFCADIGVARRAFDEMS 507
+ +HAQI K GF YPVV+TAL+D YS+ + A++ FDEMS
Sbjct: 121 CAVDSLHAQIVKSGFLHYPVVQTALVDSYSKVSGGLRNAKKVFDEMS 167
>ref|XP_003619586.1| hypothetical protein MTR_6g059820 [Medicago truncatula]
gi|355494601|gb|AES75804.1| hypothetical protein
MTR_6g059820 [Medicago truncatula]
Length = 528
Score = 161 bits (408), Expect = 7e-38
Identities = 86/166 (51%), Positives = 114/166 (68%)
Frame = +1
Query: 10 NLNNHVLAVLDKCNHFNQLRQLQAFLITLGHGQTQFYVFKIVRFCAIKLSNLTYARLIFD 189
NLN V +L K NH NQL+QLQ+ L TLGH QT FY FK++RFC++ LSNL YA IF+
Sbjct: 4 NLNELVTTILTKINHLNQLKQLQSHLTTLGHSQTHFYAFKLIRFCSLNLSNLHYAHQIFN 63
Query: 190 QLKFPNIYLYTAMITAYTSLQDHCSSLLLYREMVRQGNPEPNHFIYPLVLKSSPEVVKPY 369
+ PNIYL+TA+ITA++S Q ++ L++ M+ N PN+FIYP VLKS V + +
Sbjct: 64 HIHSPNIYLFTAIITAFSSQQH--TTFKLFKTML-NSNIRPNNFIYPHVLKS---VKERF 117
Query: 370 GTEMVHAQIEKLGFGKYPVVETALLDVYSRFCADIGVARRAFDEMS 507
++VHAQI K GF YPVVET+L+D YS+ + A + FDEMS
Sbjct: 118 LVDLVHAQIVKCGFLNYPVVETSLVDSYSKVLGGLRDAHKVFDEMS 163
>ref|NP_174603.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75168867|sp|Q9C501.1|PPR70_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At1g33350 gi|12322383|gb|AAG51215.1|AC051630_12 unknown
protein; 15445-13829 [Arabidopsis thaliana]
gi|12322567|gb|AAG51281.1|AC027035_4 PPR-repeat protein,
putative [Arabidopsis thaliana]
gi|332193465|gb|AEE31586.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 538
Score = 158 bits (399), Expect = 8e-37
Identities = 81/167 (48%), Positives = 110/167 (65%), Gaps = 2/167 (1%)
Frame = +1
Query: 13 LNNHVLAVLDKCNHFNQLRQLQAFLITLGHGQTQFYVFKIVRFCAIKLSNLTYARLIFDQ 192
LN + AV+ K H N L+Q+Q+F+I G + F FK++RFC ++L NL+YAR IFD+
Sbjct: 23 LNQFISAVISKSRHLNHLKQVQSFMIVSGLSHSHFLCFKLLRFCTLRLCNLSYARFIFDR 82
Query: 193 LKFPNIYLYTAMITAY-TSLQDHCSSLL-LYREMVRQGNPEPNHFIYPLVLKSSPEVVKP 366
FPN +LY A++TAY +SL H SS +R MV + P PNHFIYPLVLKS+P +
Sbjct: 83 FSFPNTHLYAAVLTAYSSSLPLHASSAFSFFRLMVNRSVPRPNHFIYPLVLKSTPYLSSA 142
Query: 367 YGTEMVHAQIEKLGFGKYPVVETALLDVYSRFCADIGVARRAFDEMS 507
+ T +VH + K GF Y VV+TALL Y+ + I +AR+ FDEMS
Sbjct: 143 FSTPLVHTHLFKSGFHLYVVVQTALLHSYASSVSHITLARQLFDEMS 189
>ref|XP_006415097.1| hypothetical protein EUTSA_v10009638mg [Eutrema salsugineum]
gi|557092868|gb|ESQ33450.1| hypothetical protein
EUTSA_v10009638mg [Eutrema salsugineum]
Length = 521
Score = 154 bits (390), Expect = 9e-36
Identities = 79/163 (48%), Positives = 108/163 (66%), Gaps = 2/163 (1%)
Frame = +1
Query: 25 VLAVLDKCNHFNQLRQLQAFLITLGHGQTQFYVFKIVRFCAIKLSNLTYARLIFDQLKFP 204
V + K H N L+Q+Q+FLI G + F FK++RFC ++L NL+YAR IFD+ +P
Sbjct: 12 VSEAISKSTHLNHLKQVQSFLIVAGLSHSPFLCFKLLRFCTLRLCNLSYARFIFDRFSYP 71
Query: 205 NIYLYTAMITAYTS-LQDHCSSLL-LYREMVRQGNPEPNHFIYPLVLKSSPEVVKPYGTE 378
N +LY A++TAY+S L H SS +R MV + P PNHFIYPLVLKS+P + + T
Sbjct: 72 NTHLYAAVLTAYSSSLPLHASSAFSFFRLMVNRSFPRPNHFIYPLVLKSTPHLSSAFSTL 131
Query: 379 MVHAQIEKLGFGKYPVVETALLDVYSRFCADIGVARRAFDEMS 507
+VH+ + K GFG Y VV+TALL Y+ + I +AR+ FDEMS
Sbjct: 132 LVHSHLFKSGFGLYVVVQTALLHSYASSVSHITLARQLFDEMS 174
>ref|XP_002891041.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297336883|gb|EFH67300.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 586
Score = 154 bits (390), Expect = 9e-36
Identities = 79/167 (47%), Positives = 108/167 (64%), Gaps = 2/167 (1%)
Frame = +1
Query: 13 LNNHVLAVLDKCNHFNQLRQLQAFLITLGHGQTQFYVFKIVRFCAIKLSNLTYARLIFDQ 192
+N + A + K H N L+Q+Q+FLI G + F FK++RFC ++L NL+YAR IFD+
Sbjct: 23 VNQFISAAISKSRHLNHLKQVQSFLIVSGLSHSHFLCFKLLRFCTLRLCNLSYARFIFDR 82
Query: 193 LKFPNIYLYTAMITAY-TSLQDHCSSLL-LYREMVRQGNPEPNHFIYPLVLKSSPEVVKP 366
FPN +LY A++T Y +SL H SS +R MV + P PNHFIYPLVLKS+P +
Sbjct: 83 FSFPNTHLYAAVLTGYSSSLPLHASSAFSFFRLMVNRSFPRPNHFIYPLVLKSTPYLSSA 142
Query: 367 YGTEMVHAQIEKLGFGKYPVVETALLDVYSRFCADIGVARRAFDEMS 507
+ T +VH + K GF Y VV+TALL Y+ + I +AR+ FDEMS
Sbjct: 143 FSTPLVHTHLFKSGFHLYVVVQTALLHSYASSVSHITLARQLFDEMS 189
>ref|XP_006306508.1| hypothetical protein CARUB_v10012498mg [Capsella rubella]
gi|482575219|gb|EOA39406.1| hypothetical protein
CARUB_v10012498mg [Capsella rubella]
Length = 538
Score = 153 bits (386), Expect = 3e-35
Identities = 79/167 (47%), Positives = 110/167 (65%), Gaps = 2/167 (1%)
Frame = +1
Query: 13 LNNHVLAVLDKCNHFNQLRQLQAFLITLGHGQTQFYVFKIVRFCAIKLSNLTYARLIFDQ 192
+N V +V+ K H N L+Q+Q+FLI + F FK++RFC ++L NL+YAR IFD+
Sbjct: 23 VNQFVSSVISKSTHLNHLKQVQSFLIVSELNHSPFLCFKLLRFCTLRLCNLSYARFIFDR 82
Query: 193 LKFPNIYLYTAMITAY-TSLQDHC-SSLLLYREMVRQGNPEPNHFIYPLVLKSSPEVVKP 366
+PN +LY A++TAY +SL H S+ +R MV + P PNHFIYPLVLKS+P +
Sbjct: 83 FSYPNTHLYAAVLTAYSSSLPLHAYSAFSFFRLMVTRSYPRPNHFIYPLVLKSTPHLSSA 142
Query: 367 YGTEMVHAQIEKLGFGKYPVVETALLDVYSRFCADIGVARRAFDEMS 507
+ T +VHA + K GF Y VV+TALL Y+ + I +AR+ FDEMS
Sbjct: 143 FSTPLVHAHLFKSGFHLYVVVQTALLHSYASSVSHITLARQLFDEMS 189
>ref|XP_002338705.1| predicted protein [Populus trichocarpa]
Length = 263
Score = 114 bits (286), Expect = 1e-23
Identities = 58/94 (61%), Positives = 72/94 (76%)
Frame = +1
Query: 226 MITAYTSLQDHCSSLLLYREMVRQGNPEPNHFIYPLVLKSSPEVVKPYGTEMVHAQIEKL 405
M+TAY S+QDH SS L+R M+R+G+P+PNHF++P VLK T+ VHAQIEKL
Sbjct: 1 MVTAYASIQDHQSSFDLFRFMLRRGHPKPNHFLFPHVLKYCQV------TKFVHAQIEKL 54
Query: 406 GFGKYPVVETALLDVYSRFCADIGVARRAFDEMS 507
GFG+YPVV+TAL+D YSR DIG+ARR FDEMS
Sbjct: 55 GFGQYPVVQTALIDSYSRSGYDIGIARRMFDEMS 88
>ref|NP_001047457.1| Os02g0620800 [Oryza sativa Japonica Group]
gi|47847758|dbj|BAD21535.1| putative pentatricopeptide
(PPR) repeat-containing protein [Oryza sativa Japonica
Group] gi|47847799|dbj|BAD21575.1| putative
pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group] gi|113536988|dbj|BAF09371.1|
Os02g0620800 [Oryza sativa Japonica Group]
Length = 530
Score = 110 bits (276), Expect = 1e-22
Identities = 63/175 (36%), Positives = 99/175 (56%), Gaps = 8/175 (4%)
Frame = +1
Query: 7 FNLNNHVLAVLDKCNHFNQLRQLQAFLITLGHGQTQFYVFKIVRFCAIKLSNLTYARLIF 186
F+ + +A L +C L+QL A + G Q F ++RF +++LS L YAR +F
Sbjct: 7 FSSHGDFVAALHRCATLAHLKQLHAHAVVTGRAAAQTTTFHLLRFASLRLSCLPYARRLF 66
Query: 187 DQLKFPNIYLYTAMITAYTSLQDHC-----SSLLLYREMVRQGNPEPNHFIYPLVLKSSP 351
D PN++LY+AM++AY + H SL L+ M+R+G P PN F+YPLVL+++
Sbjct: 67 DATPSPNVFLYSAMLSAYAAASSHSQEHARDSLALFLRMLRRGRPAPNQFVYPLVLRAAC 126
Query: 352 EVVKPYGTEMV---HAQIEKLGFGKYPVVETALLDVYSRFCADIGVARRAFDEMS 507
+ G ++V H K GF + + T+LLD YSR+ +G AR+ FD ++
Sbjct: 127 AI----GVQLVRSIHCHACKDGFYGHDFIRTSLLDGYSRY-GMMGDARKLFDGLT 176