BLASTX nr result
ID: Catharanthus22_contig00039241
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus22_contig00039241
(319 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006341754.1| PREDICTED: DNA polymerase alpha subunit B-li... 130 2e-28
ref|XP_004239184.1| PREDICTED: DNA polymerase alpha subunit B-li... 128 7e-28
ref|XP_006378282.1| DNA polymerase alpha subunit B family protei... 110 2e-22
gb|EPS73745.1| hypothetical protein M569_01012 [Genlisea aurea] 109 4e-22
ref|XP_002265789.1| PREDICTED: DNA polymerase alpha subunit B [V... 107 2e-21
gb|EXB94967.1| DNA polymerase alpha subunit B [Morus notabilis] 107 2e-21
ref|XP_006484041.1| PREDICTED: DNA polymerase alpha subunit B-li... 106 4e-21
ref|XP_006438110.1| hypothetical protein CICLE_v10030973mg [Citr... 106 4e-21
ref|XP_002514998.1| alpha DNA polymerase, putative [Ricinus comm... 105 6e-21
ref|XP_006591473.1| PREDICTED: DNA polymerase alpha subunit B-li... 101 9e-20
ref|XP_004137446.1| PREDICTED: DNA polymerase alpha subunit B-li... 101 9e-20
ref|XP_003537544.1| PREDICTED: DNA polymerase alpha subunit B-li... 101 9e-20
ref|XP_003552790.1| PREDICTED: DNA polymerase alpha subunit B-li... 100 3e-19
ref|XP_004502325.1| PREDICTED: DNA polymerase alpha subunit B-li... 99 7e-19
ref|XP_004502324.1| PREDICTED: DNA polymerase alpha subunit B-li... 99 7e-19
gb|EOY00828.1| DNA polymerase alpha 2 [Theobroma cacao] 98 1e-18
ref|XP_004310044.1| PREDICTED: DNA polymerase alpha subunit B-li... 97 2e-18
gb|ESW35722.1| hypothetical protein PHAVU_001G259300g [Phaseolus... 96 4e-18
ref|XP_006300633.1| hypothetical protein CARUB_v10019947mg, part... 96 6e-18
ref|XP_003601821.1| DNA polymerase alpha subunit B [Medicago tru... 95 8e-18
>ref|XP_006341754.1| PREDICTED: DNA polymerase alpha subunit B-like [Solanum tuberosum]
Length = 617
Score = 130 bits (326), Expect = 2e-28
Identities = 63/82 (76%), Positives = 71/82 (86%)
Frame = +1
Query: 73 MEEEIKAEFKRYGFILEDEEEILQKCLTFCIEYKLSPSDLVSSWDVFSLNRGLELTVQGE 252
MEEEIKAEF + GF L+DE EIL KCLTFCI+Y LSPSDLVSSWDV+SLNRGL+LTVQ
Sbjct: 1 MEEEIKAEFLKNGFSLDDEAEILNKCLTFCIQYSLSPSDLVSSWDVYSLNRGLQLTVQSS 60
Query: 253 LMGAFLQQLQNEQTEAIIKQEP 318
MGAFLQQLQNE+ E I+K+EP
Sbjct: 61 HMGAFLQQLQNERREDIVKKEP 82
>ref|XP_004239184.1| PREDICTED: DNA polymerase alpha subunit B-like [Solanum
lycopersicum]
Length = 617
Score = 128 bits (322), Expect = 7e-28
Identities = 62/82 (75%), Positives = 70/82 (85%)
Frame = +1
Query: 73 MEEEIKAEFKRYGFILEDEEEILQKCLTFCIEYKLSPSDLVSSWDVFSLNRGLELTVQGE 252
MEEEIKAEF + GF +DE EIL KCLTFCI+Y LSPSDLVSSWDV+SLNRGL+LTVQ
Sbjct: 1 MEEEIKAEFLKNGFSFDDETEILNKCLTFCIQYSLSPSDLVSSWDVYSLNRGLQLTVQSS 60
Query: 253 LMGAFLQQLQNEQTEAIIKQEP 318
MGAFLQQLQNE+ E I+K+EP
Sbjct: 61 HMGAFLQQLQNERREDIVKKEP 82
>ref|XP_006378282.1| DNA polymerase alpha subunit B family protein [Populus trichocarpa]
gi|550329229|gb|ERP56079.1| DNA polymerase alpha subunit
B family protein [Populus trichocarpa]
Length = 618
Score = 110 bits (275), Expect = 2e-22
Identities = 55/83 (66%), Positives = 65/83 (78%), Gaps = 1/83 (1%)
Frame = +1
Query: 73 MEEEIKAEFKRYGFILEDEEEILQKCLTFCIEYKLSPSDLVSSWDVFSLNRGL-ELTVQG 249
MEEEIK EFK+ GF L+DEEE+L+KCLTFCI Y L PSDLVSSW+V+ LNR L E TV+
Sbjct: 1 MEEEIKEEFKKSGFSLDDEEEVLKKCLTFCINYNLKPSDLVSSWEVYYLNRLLDESTVRN 60
Query: 250 ELMGAFLQQLQNEQTEAIIKQEP 318
M FL LQNEQ EA++K+EP
Sbjct: 61 AEMDGFLLHLQNEQKEAVVKEEP 83
>gb|EPS73745.1| hypothetical protein M569_01012 [Genlisea aurea]
Length = 595
Score = 109 bits (272), Expect = 4e-22
Identities = 51/81 (62%), Positives = 65/81 (80%)
Frame = +1
Query: 73 MEEEIKAEFKRYGFILEDEEEILQKCLTFCIEYKLSPSDLVSSWDVFSLNRGLELTVQGE 252
MEEE+KAEF R GF +DEEEIL KCLTFCI+YKLS SDLVSSWDV+S+NRGL+ TV+
Sbjct: 1 MEEELKAEFVRNGFSFDDEEEILSKCLTFCIQYKLSASDLVSSWDVYSINRGLDFTVRSS 60
Query: 253 LMGAFLQQLQNEQTEAIIKQE 315
M FL++L NEQ + + +++
Sbjct: 61 HMAPFLEELLNEQKDKLKEKQ 81
>ref|XP_002265789.1| PREDICTED: DNA polymerase alpha subunit B [Vitis vinifera]
gi|297738371|emb|CBI27572.3| unnamed protein product
[Vitis vinifera]
Length = 623
Score = 107 bits (267), Expect = 2e-21
Identities = 56/85 (65%), Positives = 66/85 (77%), Gaps = 3/85 (3%)
Frame = +1
Query: 73 MEEEIKAEFKRYGFIL--EDEEEILQKCLTFCIEYKLSPSDLVSSWDVFSLNRGLELTVQ 246
MEEEI EFK+ GF E+EEE+L+KCLTFCI YKLSPSDLVSSW+V+ LNR L+ +V
Sbjct: 1 MEEEIMLEFKKIGFSFHKEEEEEVLKKCLTFCINYKLSPSDLVSSWEVYYLNRQLDESVV 60
Query: 247 GE-LMGAFLQQLQNEQTEAIIKQEP 318
G LM FL LQNEQ EA+IK+EP
Sbjct: 61 GNALMDGFLLHLQNEQKEAVIKEEP 85
>gb|EXB94967.1| DNA polymerase alpha subunit B [Morus notabilis]
Length = 670
Score = 107 bits (266), Expect = 2e-21
Identities = 54/83 (65%), Positives = 63/83 (75%), Gaps = 1/83 (1%)
Frame = +1
Query: 73 MEEEIKAEFKRYGFILEDEEEILQKCLTFCIEYKLSPSDLVSSWDVFSLNRGLE-LTVQG 249
ME+EIKAEF + GF L+DEEEIL+KCLTFCI Y L P D+VSSW+V+ LNR L TVQ
Sbjct: 1 MEDEIKAEFSKVGFALDDEEEILKKCLTFCINYNLKPCDIVSSWEVYYLNRQLNGSTVQN 60
Query: 250 ELMGAFLQQLQNEQTEAIIKQEP 318
M FL LQ+EQ EAIIK+EP
Sbjct: 61 AEMDGFLLHLQDEQKEAIIKEEP 83
>ref|XP_006484041.1| PREDICTED: DNA polymerase alpha subunit B-like [Citrus sinensis]
Length = 620
Score = 106 bits (264), Expect = 4e-21
Identities = 54/83 (65%), Positives = 64/83 (77%), Gaps = 1/83 (1%)
Frame = +1
Query: 73 MEEEIKAEFKRYGFILEDEEEILQKCLTFCIEYKLSPSDLVSSWDVFSLNRGL-ELTVQG 249
MEEEIKAEF++ GF DE E+L+KCLTFCI Y L PSDLVSSW+V+ LNR L E TV+
Sbjct: 1 MEEEIKAEFQKNGFNFVDEGEVLKKCLTFCINYNLKPSDLVSSWEVYYLNRQLDESTVKD 60
Query: 250 ELMGAFLQQLQNEQTEAIIKQEP 318
+ M F+ LQNEQ EAIIK+EP
Sbjct: 61 DEMDGFMLHLQNEQKEAIIKEEP 83
>ref|XP_006438110.1| hypothetical protein CICLE_v10030973mg [Citrus clementina]
gi|557540306|gb|ESR51350.1| hypothetical protein
CICLE_v10030973mg [Citrus clementina]
Length = 620
Score = 106 bits (264), Expect = 4e-21
Identities = 54/83 (65%), Positives = 64/83 (77%), Gaps = 1/83 (1%)
Frame = +1
Query: 73 MEEEIKAEFKRYGFILEDEEEILQKCLTFCIEYKLSPSDLVSSWDVFSLNRGL-ELTVQG 249
MEEEIKAEF++ GF DE E+L+KCLTFCI Y L PSDLVSSW+V+ LNR L E TV+
Sbjct: 1 MEEEIKAEFQKNGFNFVDEGEVLKKCLTFCINYNLKPSDLVSSWEVYYLNRQLDESTVKD 60
Query: 250 ELMGAFLQQLQNEQTEAIIKQEP 318
+ M F+ LQNEQ EAIIK+EP
Sbjct: 61 DEMDGFMLHLQNEQKEAIIKEEP 83
>ref|XP_002514998.1| alpha DNA polymerase, putative [Ricinus communis]
gi|223546049|gb|EEF47552.1| alpha DNA polymerase,
putative [Ricinus communis]
Length = 621
Score = 105 bits (262), Expect = 6e-21
Identities = 57/84 (67%), Positives = 64/84 (76%), Gaps = 2/84 (2%)
Frame = +1
Query: 73 MEEEIKAEFKRYGFILEDEEE-ILQKCLTFCIEYKLSPSDLVSSWDVFSLNRGL-ELTVQ 246
MEEEIKAEF + GF L+ EEE IL+KCLTFCI Y L P+DLVSSW+V+ LNR L E TVQ
Sbjct: 1 MEEEIKAEFNKSGFTLDHEEEQILKKCLTFCINYNLKPADLVSSWEVYYLNRQLDESTVQ 60
Query: 247 GELMGAFLQQLQNEQTEAIIKQEP 318
M FL LQNEQ EAIIK+EP
Sbjct: 61 NGEMDGFLLHLQNEQKEAIIKEEP 84
>ref|XP_006591473.1| PREDICTED: DNA polymerase alpha subunit B-like isoform X2 [Glycine
max]
Length = 577
Score = 101 bits (252), Expect = 9e-20
Identities = 52/82 (63%), Positives = 63/82 (76%), Gaps = 1/82 (1%)
Frame = +1
Query: 73 MEEEIKAEFKRYGFILEDEEEILQKCLTFCIEYKLSPSDLVSSWDVFSLNRGL-ELTVQG 249
MEEEIK+EFKR GF LEDE+EIL KC+TFCI Y L+PSDLVSSW+V+ LNR L E VQ
Sbjct: 1 MEEEIKSEFKRSGFGLEDEQEILSKCVTFCINYSLTPSDLVSSWEVYYLNRQLNEPVVQN 60
Query: 250 ELMGAFLQQLQNEQTEAIIKQE 315
+ FL LQNE+ E +IK++
Sbjct: 61 AEIDGFLLHLQNEKKEDVIKEK 82
>ref|XP_004137446.1| PREDICTED: DNA polymerase alpha subunit B-like [Cucumis sativus]
gi|449486914|ref|XP_004157440.1| PREDICTED: DNA
polymerase alpha subunit B-like [Cucumis sativus]
Length = 622
Score = 101 bits (252), Expect = 9e-20
Identities = 50/83 (60%), Positives = 62/83 (74%), Gaps = 1/83 (1%)
Frame = +1
Query: 73 MEEEIKAEFKRYGFILEDEEEILQKCLTFCIEYKLSPSDLVSSWDVFSLNRGLE-LTVQG 249
MEEEI EFKR GF ++EEEIL+KC+TFC+ Y L PSD+VSSW+V+ LNR L+ V+
Sbjct: 1 MEEEIGEEFKRSGFTFDEEEEILKKCVTFCVNYNLKPSDIVSSWEVYYLNRLLDGSVVEL 60
Query: 250 ELMGAFLQQLQNEQTEAIIKQEP 318
E + FLQ LQNEQ E +IK EP
Sbjct: 61 EQLDGFLQHLQNEQKETVIKGEP 83
>ref|XP_003537544.1| PREDICTED: DNA polymerase alpha subunit B-like isoform X1 [Glycine
max]
Length = 605
Score = 101 bits (252), Expect = 9e-20
Identities = 52/82 (63%), Positives = 63/82 (76%), Gaps = 1/82 (1%)
Frame = +1
Query: 73 MEEEIKAEFKRYGFILEDEEEILQKCLTFCIEYKLSPSDLVSSWDVFSLNRGL-ELTVQG 249
MEEEIK+EFKR GF LEDE+EIL KC+TFCI Y L+PSDLVSSW+V+ LNR L E VQ
Sbjct: 1 MEEEIKSEFKRSGFGLEDEQEILSKCVTFCINYSLTPSDLVSSWEVYYLNRQLNEPVVQN 60
Query: 250 ELMGAFLQQLQNEQTEAIIKQE 315
+ FL LQNE+ E +IK++
Sbjct: 61 AEIDGFLLHLQNEKKEDVIKEK 82
>ref|XP_003552790.1| PREDICTED: DNA polymerase alpha subunit B-like [Glycine max]
Length = 606
Score = 99.8 bits (247), Expect = 3e-19
Identities = 50/82 (60%), Positives = 63/82 (76%), Gaps = 1/82 (1%)
Frame = +1
Query: 73 MEEEIKAEFKRYGFILEDEEEILQKCLTFCIEYKLSPSDLVSSWDVFSLNRGL-ELTVQG 249
MEE+IK+EFKR GF LEDE+EIL KC+T+CI Y L+PSDLVSSW+V+ LNR L E VQ
Sbjct: 1 MEEQIKSEFKRSGFGLEDEQEILSKCVTYCINYSLTPSDLVSSWEVYYLNRQLNEPIVQN 60
Query: 250 ELMGAFLQQLQNEQTEAIIKQE 315
+ FL LQNE+ E +IK++
Sbjct: 61 TEIDGFLLHLQNEKKETVIKEK 82
>ref|XP_004502325.1| PREDICTED: DNA polymerase alpha subunit B-like isoform X2 [Cicer
arietinum]
Length = 524
Score = 98.6 bits (244), Expect = 7e-19
Identities = 52/82 (63%), Positives = 62/82 (75%), Gaps = 1/82 (1%)
Frame = +1
Query: 73 MEEEIKAEFKRYGFILEDEEEILQKCLTFCIEYKLSPSDLVSSWDVFSLNRGL-ELTVQG 249
M+EEIK+EFK+ GF L++EEEIL KCLTFCI Y L+PSDLVSSW+V+ LNR L E TV+
Sbjct: 1 MKEEIKSEFKKAGFDLDEEEEILSKCLTFCINYSLTPSDLVSSWEVYYLNRQLNEPTVEN 60
Query: 250 ELMGAFLQQLQNEQTEAIIKQE 315
M FL LQN E IIK+E
Sbjct: 61 AEMEGFLIHLQNITKEDIIKEE 82
>ref|XP_004502324.1| PREDICTED: DNA polymerase alpha subunit B-like isoform X1 [Cicer
arietinum]
Length = 616
Score = 98.6 bits (244), Expect = 7e-19
Identities = 52/82 (63%), Positives = 62/82 (75%), Gaps = 1/82 (1%)
Frame = +1
Query: 73 MEEEIKAEFKRYGFILEDEEEILQKCLTFCIEYKLSPSDLVSSWDVFSLNRGL-ELTVQG 249
M+EEIK+EFK+ GF L++EEEIL KCLTFCI Y L+PSDLVSSW+V+ LNR L E TV+
Sbjct: 1 MKEEIKSEFKKAGFDLDEEEEILSKCLTFCINYSLTPSDLVSSWEVYYLNRQLNEPTVEN 60
Query: 250 ELMGAFLQQLQNEQTEAIIKQE 315
M FL LQN E IIK+E
Sbjct: 61 AEMEGFLIHLQNITKEDIIKEE 82
>gb|EOY00828.1| DNA polymerase alpha 2 [Theobroma cacao]
Length = 621
Score = 97.8 bits (242), Expect = 1e-18
Identities = 49/83 (59%), Positives = 61/83 (73%), Gaps = 1/83 (1%)
Frame = +1
Query: 73 MEEEIKAEFKRYGFILEDEEEILQKCLTFCIEYKLSPSDLVSSWDVFSLNRGL-ELTVQG 249
MEEEIKAEF + GF L++EEEIL+KC FC+ + L PSDLVSSW+V+ LNR L E V+
Sbjct: 1 MEEEIKAEFLKNGFTLDEEEEILKKCHMFCLNFSLKPSDLVSSWEVYYLNRQLDESVVKD 60
Query: 250 ELMGAFLQQLQNEQTEAIIKQEP 318
M F LQNEQ EA++K+EP
Sbjct: 61 AEMDGFSGHLQNEQVEAVVKKEP 83
>ref|XP_004310044.1| PREDICTED: DNA polymerase alpha subunit B-like [Fragaria vesca
subsp. vesca]
Length = 620
Score = 97.4 bits (241), Expect = 2e-18
Identities = 52/84 (61%), Positives = 64/84 (76%), Gaps = 2/84 (2%)
Frame = +1
Query: 73 MEEEIKAEFKRYGFILEDEEEILQKCLTFCIEYKLSPSDLVSSWDVFSLNRGL-ELTVQG 249
ME++IKAEF + F L+ E+EIL+KCLTFCI YKL+PSDLVSSW+++ LNR L E V+
Sbjct: 1 MEDQIKAEFIKSDFTLDQEDEILKKCLTFCINYKLTPSDLVSSWEIYYLNRQLNEPVVRD 60
Query: 250 ELMGAFLQQLQNEQTEAI-IKQEP 318
M FLQ LQNEQ EAI K+EP
Sbjct: 61 VEMEGFLQHLQNEQKEAINSKEEP 84
>gb|ESW35722.1| hypothetical protein PHAVU_001G259300g [Phaseolus vulgaris]
Length = 625
Score = 96.3 bits (238), Expect = 4e-18
Identities = 49/82 (59%), Positives = 62/82 (75%), Gaps = 1/82 (1%)
Frame = +1
Query: 73 MEEEIKAEFKRYGFILEDEEEILQKCLTFCIEYKLSPSDLVSSWDVFSLNRGL-ELTVQG 249
M+EEIK+EFKR GF +EDE+EIL KC+TFCI Y L+PSDLVSSW+V LNR L E V+
Sbjct: 1 MDEEIKSEFKRSGFDIEDEQEILSKCVTFCINYSLTPSDLVSSWEVHYLNRQLNEPIVES 60
Query: 250 ELMGAFLQQLQNEQTEAIIKQE 315
+ FL LQN++ E IIK++
Sbjct: 61 AEIDGFLLHLQNQKKEDIIKEK 82
>ref|XP_006300633.1| hypothetical protein CARUB_v10019947mg, partial [Capsella rubella]
gi|482569343|gb|EOA33531.1| hypothetical protein
CARUB_v10019947mg, partial [Capsella rubella]
Length = 639
Score = 95.5 bits (236), Expect = 6e-18
Identities = 47/81 (58%), Positives = 62/81 (76%), Gaps = 1/81 (1%)
Frame = +1
Query: 76 EEEIKAEFKRYGFILEDEEEILQKCLTFCIEYKLSPSDLVSSWDVFSLNRG-LELTVQGE 252
+EEIK EFKR GF L +E+EILQKC+T CI Y L PSDLVSSW+++ LNR L+ TV+ +
Sbjct: 23 DEEIKNEFKRSGFTLVEEDEILQKCVTLCINYSLKPSDLVSSWELYHLNRQLLDQTVKKD 82
Query: 253 LMGAFLQQLQNEQTEAIIKQE 315
M F+ LQNEQ E+I+++E
Sbjct: 83 EMDGFVLHLQNEQKESIMREE 103
>ref|XP_003601821.1| DNA polymerase alpha subunit B [Medicago truncatula]
gi|355490869|gb|AES72072.1| DNA polymerase alpha subunit
B [Medicago truncatula]
Length = 616
Score = 95.1 bits (235), Expect = 8e-18
Identities = 49/82 (59%), Positives = 60/82 (73%), Gaps = 1/82 (1%)
Frame = +1
Query: 73 MEEEIKAEFKRYGFILEDEEEILQKCLTFCIEYKLSPSDLVSSWDVFSLNRGL-ELTVQG 249
M+EEIK+EFK+ GF ++EEEIL KCLTFCI Y L+PSDLVSSW+V+ LNR L E VQ
Sbjct: 1 MKEEIKSEFKKAGFDFDEEEEILSKCLTFCINYSLTPSDLVSSWEVYYLNRQLDEPIVQN 60
Query: 250 ELMGAFLQQLQNEQTEAIIKQE 315
M F+ LQN + IIK+E
Sbjct: 61 AEMEGFMLHLQNNVKDDIIKEE 82