BLASTX nr result
ID: Catharanthus22_contig00039148
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus22_contig00039148
(265 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI24863.3| unnamed protein product [Vitis vinifera] 92 6e-17
gb|EMS48960.1| hypothetical protein TRIUR3_11118 [Triticum urartu] 91 1e-16
ref|XP_006438984.1| hypothetical protein CICLE_v10033061mg [Citr... 91 2e-16
ref|XP_006659178.1| PREDICTED: U6 snRNA-associated Sm-like prote... 91 2e-16
ref|XP_006482902.1| PREDICTED: U6 snRNA-associated Sm-like prote... 91 2e-16
gb|ESW30655.1| hypothetical protein PHAVU_002G171900g [Phaseolus... 91 2e-16
ref|XP_006395667.1| hypothetical protein EUTSA_v10005187mg [Eutr... 91 2e-16
gb|EOX96719.1| Small nuclear ribonucleoprotein family protein [T... 91 2e-16
ref|XP_006292107.1| hypothetical protein CARUB_v10018303mg [Caps... 91 2e-16
ref|XP_004306521.1| PREDICTED: probable U6 snRNA-associated Sm-l... 91 2e-16
gb|EMJ19844.1| hypothetical protein PRUPE_ppa013852mg [Prunus pe... 91 2e-16
gb|EMJ19843.1| hypothetical protein PRUPE_ppa013852mg [Prunus pe... 91 2e-16
gb|EMJ19842.1| hypothetical protein PRUPE_ppa013852mg [Prunus pe... 91 2e-16
ref|XP_004149601.1| PREDICTED: U6 snRNA-associated Sm-like prote... 91 2e-16
ref|NP_178480.1| U6 snRNA-associated Sm-like protein LSm7 [Arab... 91 2e-16
ref|NP_001061124.1| Os08g0177700 [Oryza sativa Japonica Group] g... 91 2e-16
gb|AFK37807.1| unknown [Lotus japonicus] 91 2e-16
ref|XP_003573412.1| PREDICTED: U6 snRNA-associated Sm-like prote... 91 2e-16
ref|XP_003524910.1| PREDICTED: U6 snRNA-associated Sm-like prote... 91 2e-16
ref|XP_002875234.1| hypothetical protein ARALYDRAFT_484298 [Arab... 91 2e-16
>emb|CBI24863.3| unnamed protein product [Vitis vinifera]
Length = 107
Score = 92.4 bits (228), Expect = 6e-17
Identities = 46/46 (100%), Positives = 46/46 (100%)
Frame = +1
Query: 127 QSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDE 264
QSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDE
Sbjct: 9 QSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDE 54
>gb|EMS48960.1| hypothetical protein TRIUR3_11118 [Triticum urartu]
Length = 204
Score = 91.3 bits (225), Expect = 1e-16
Identities = 45/46 (97%), Positives = 46/46 (100%)
Frame = +1
Query: 127 QSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDE 264
+SGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDE
Sbjct: 101 ESGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDE 146
>ref|XP_006438984.1| hypothetical protein CICLE_v10033061mg [Citrus clementina]
gi|557541180|gb|ESR52224.1| hypothetical protein
CICLE_v10033061mg [Citrus clementina]
Length = 131
Score = 90.9 bits (224), Expect = 2e-16
Identities = 45/48 (93%), Positives = 46/48 (95%)
Frame = +1
Query: 121 VSQSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDE 264
+ SGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDE
Sbjct: 31 LKMSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDE 78
>ref|XP_006659178.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm7-like [Oryza
brachyantha]
Length = 98
Score = 90.5 bits (223), Expect = 2e-16
Identities = 45/45 (100%), Positives = 45/45 (100%)
Frame = +1
Query: 130 SGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDE 264
SGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDE
Sbjct: 2 SGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDE 46
>ref|XP_006482902.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm7-like [Citrus
sinensis]
Length = 99
Score = 90.5 bits (223), Expect = 2e-16
Identities = 45/45 (100%), Positives = 45/45 (100%)
Frame = +1
Query: 130 SGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDE 264
SGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDE
Sbjct: 2 SGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDE 46
>gb|ESW30655.1| hypothetical protein PHAVU_002G171900g [Phaseolus vulgaris]
Length = 99
Score = 90.5 bits (223), Expect = 2e-16
Identities = 45/45 (100%), Positives = 45/45 (100%)
Frame = +1
Query: 130 SGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDE 264
SGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDE
Sbjct: 2 SGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDE 46
>ref|XP_006395667.1| hypothetical protein EUTSA_v10005187mg [Eutrema salsugineum]
gi|557092306|gb|ESQ32953.1| hypothetical protein
EUTSA_v10005187mg [Eutrema salsugineum]
Length = 99
Score = 90.5 bits (223), Expect = 2e-16
Identities = 45/45 (100%), Positives = 45/45 (100%)
Frame = +1
Query: 130 SGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDE 264
SGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDE
Sbjct: 2 SGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDE 46
>gb|EOX96719.1| Small nuclear ribonucleoprotein family protein [Theobroma cacao]
Length = 99
Score = 90.5 bits (223), Expect = 2e-16
Identities = 45/45 (100%), Positives = 45/45 (100%)
Frame = +1
Query: 130 SGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDE 264
SGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDE
Sbjct: 2 SGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDE 46
>ref|XP_006292107.1| hypothetical protein CARUB_v10018303mg [Capsella rubella]
gi|482560814|gb|EOA25005.1| hypothetical protein
CARUB_v10018303mg [Capsella rubella]
Length = 99
Score = 90.5 bits (223), Expect = 2e-16
Identities = 45/45 (100%), Positives = 45/45 (100%)
Frame = +1
Query: 130 SGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDE 264
SGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDE
Sbjct: 2 SGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDE 46
>ref|XP_004306521.1| PREDICTED: probable U6 snRNA-associated Sm-like protein LSm7-like
[Fragaria vesca subsp. vesca]
Length = 99
Score = 90.5 bits (223), Expect = 2e-16
Identities = 45/45 (100%), Positives = 45/45 (100%)
Frame = +1
Query: 130 SGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDE 264
SGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDE
Sbjct: 2 SGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDE 46
>gb|EMJ19844.1| hypothetical protein PRUPE_ppa013852mg [Prunus persica]
Length = 78
Score = 90.5 bits (223), Expect = 2e-16
Identities = 45/45 (100%), Positives = 45/45 (100%)
Frame = +1
Query: 130 SGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDE 264
SGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDE
Sbjct: 2 SGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDE 46
>gb|EMJ19843.1| hypothetical protein PRUPE_ppa013852mg [Prunus persica]
Length = 99
Score = 90.5 bits (223), Expect = 2e-16
Identities = 45/45 (100%), Positives = 45/45 (100%)
Frame = +1
Query: 130 SGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDE 264
SGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDE
Sbjct: 2 SGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDE 46
>gb|EMJ19842.1| hypothetical protein PRUPE_ppa013852mg [Prunus persica]
Length = 72
Score = 90.5 bits (223), Expect = 2e-16
Identities = 45/45 (100%), Positives = 45/45 (100%)
Frame = +1
Query: 130 SGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDE 264
SGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDE
Sbjct: 2 SGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDE 46
>ref|XP_004149601.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm7-like isoform 1
[Cucumis sativus] gi|449463765|ref|XP_004149602.1|
PREDICTED: U6 snRNA-associated Sm-like protein LSm7-like
isoform 2 [Cucumis sativus]
gi|449530742|ref|XP_004172352.1| PREDICTED: U6
snRNA-associated Sm-like protein LSm7-like isoform 1
[Cucumis sativus] gi|449530744|ref|XP_004172353.1|
PREDICTED: U6 snRNA-associated Sm-like protein LSm7-like
isoform 2 [Cucumis sativus]
Length = 99
Score = 90.5 bits (223), Expect = 2e-16
Identities = 45/45 (100%), Positives = 45/45 (100%)
Frame = +1
Query: 130 SGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDE 264
SGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDE
Sbjct: 2 SGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDE 46
>ref|NP_178480.1| U6 snRNA-associated Sm-like protein LSm7 [Arabidopsis thaliana]
gi|30678085|ref|NP_849931.1| U6 snRNA-associated Sm-like
protein LSm7 [Arabidopsis thaliana]
gi|4582434|gb|AAD24820.1| putative snRNP splicing factor
[Arabidopsis thaliana] gi|27765062|gb|AAO23652.1|
At2g03870 [Arabidopsis thaliana]
gi|110742944|dbj|BAE99367.1| putative snRNP splicing
factor [Arabidopsis thaliana]
gi|330250666|gb|AEC05760.1| U6 snRNA-associated Sm-like
protein LSm7 [Arabidopsis thaliana]
gi|330250667|gb|AEC05761.1| U6 snRNA-associated Sm-like
protein LSm7 [Arabidopsis thaliana]
Length = 99
Score = 90.5 bits (223), Expect = 2e-16
Identities = 45/45 (100%), Positives = 45/45 (100%)
Frame = +1
Query: 130 SGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDE 264
SGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDE
Sbjct: 2 SGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDE 46
>ref|NP_001061124.1| Os08g0177700 [Oryza sativa Japonica Group]
gi|38636805|dbj|BAD03046.1| putative snRNP splicing
factor -related [Oryza sativa Japonica Group]
gi|38636982|dbj|BAD03242.1| putative snRNP splicing
factor -related [Oryza sativa Japonica Group]
gi|113623093|dbj|BAF23038.1| Os08g0177700 [Oryza sativa
Japonica Group] gi|218200565|gb|EEC82992.1| hypothetical
protein OsI_28028 [Oryza sativa Indica Group]
Length = 98
Score = 90.5 bits (223), Expect = 2e-16
Identities = 45/45 (100%), Positives = 45/45 (100%)
Frame = +1
Query: 130 SGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDE 264
SGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDE
Sbjct: 2 SGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDE 46
>gb|AFK37807.1| unknown [Lotus japonicus]
Length = 99
Score = 90.5 bits (223), Expect = 2e-16
Identities = 45/45 (100%), Positives = 45/45 (100%)
Frame = +1
Query: 130 SGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDE 264
SGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDE
Sbjct: 2 SGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDE 46
>ref|XP_003573412.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm7-like
[Brachypodium distachyon]
Length = 101
Score = 90.5 bits (223), Expect = 2e-16
Identities = 45/45 (100%), Positives = 45/45 (100%)
Frame = +1
Query: 130 SGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDE 264
SGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDE
Sbjct: 2 SGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDE 46
>ref|XP_003524910.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm7-like [Glycine
max]
Length = 99
Score = 90.5 bits (223), Expect = 2e-16
Identities = 45/45 (100%), Positives = 45/45 (100%)
Frame = +1
Query: 130 SGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDE 264
SGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDE
Sbjct: 2 SGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDE 46
>ref|XP_002875234.1| hypothetical protein ARALYDRAFT_484298 [Arabidopsis lyrata subsp.
lyrata] gi|297321072|gb|EFH51493.1| hypothetical protein
ARALYDRAFT_484298 [Arabidopsis lyrata subsp. lyrata]
Length = 99
Score = 90.5 bits (223), Expect = 2e-16
Identities = 45/45 (100%), Positives = 45/45 (100%)
Frame = +1
Query: 130 SGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDE 264
SGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDE
Sbjct: 2 SGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDE 46