BLASTX nr result

ID: Catharanthus22_contig00039130 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus22_contig00039130
         (464 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004967645.1| PREDICTED: transcription factor PIF3-like is...    57   2e-06
ref|XP_004967640.1| PREDICTED: transcription factor PIF3-like is...    57   2e-06
ref|XP_004292266.1| PREDICTED: transcription factor PIF1-like [F...    57   3e-06
ref|XP_004302325.1| PREDICTED: transcription factor PIF3-like [F...    56   4e-06
ref|XP_004247109.1| PREDICTED: transcription factor PIF1-like [S...    56   6e-06
ref|XP_006408930.1| hypothetical protein EUTSA_v10001974mg [Eutr...    55   1e-05

>ref|XP_004967645.1| PREDICTED: transcription factor PIF3-like isoform X6 [Setaria
           italica]
          Length = 619

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 39/103 (37%), Positives = 55/103 (53%), Gaps = 6/103 (5%)
 Frame = +3

Query: 3   KRDTASILDDAVKYIKALQNQVQMMSIRAGALFQAQYMLQANYPGLQVPQNPHYMHMIPR 182
           K D AS+LD+A++Y+K LQ QVQMMS+ +G L     +L      LQ+PQ  H+ H+   
Sbjct: 398 KIDKASMLDEAIEYLKTLQLQVQMMSMGSG-LCIPPMLLPPTMQHLQIPQIAHFPHLGMG 456

Query: 183 I--GMGIHGMSSAPLYMMPFT----FPGPWQSNLAASGMPMVG 293
           +  GMG+  M+S+P    P      FP        A G+ M G
Sbjct: 457 LGYGMGVFDMNSSPAVPFPSMPGAHFPCSMIPGTTAQGLGMPG 499


>ref|XP_004967640.1| PREDICTED: transcription factor PIF3-like isoform X1 [Setaria
           italica] gi|514773032|ref|XP_004967641.1| PREDICTED:
           transcription factor PIF3-like isoform X2 [Setaria
           italica] gi|514773036|ref|XP_004967642.1| PREDICTED:
           transcription factor PIF3-like isoform X3 [Setaria
           italica] gi|514773040|ref|XP_004967643.1| PREDICTED:
           transcription factor PIF3-like isoform X4 [Setaria
           italica] gi|514773044|ref|XP_004967644.1| PREDICTED:
           transcription factor PIF3-like isoform X5 [Setaria
           italica]
          Length = 624

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 39/103 (37%), Positives = 55/103 (53%), Gaps = 6/103 (5%)
 Frame = +3

Query: 3   KRDTASILDDAVKYIKALQNQVQMMSIRAGALFQAQYMLQANYPGLQVPQNPHYMHMIPR 182
           K D AS+LD+A++Y+K LQ QVQMMS+ +G L     +L      LQ+PQ  H+ H+   
Sbjct: 403 KIDKASMLDEAIEYLKTLQLQVQMMSMGSG-LCIPPMLLPPTMQHLQIPQIAHFPHLGMG 461

Query: 183 I--GMGIHGMSSAPLYMMPFT----FPGPWQSNLAASGMPMVG 293
           +  GMG+  M+S+P    P      FP        A G+ M G
Sbjct: 462 LGYGMGVFDMNSSPAVPFPSMPGAHFPCSMIPGTTAQGLGMPG 504


>ref|XP_004292266.1| PREDICTED: transcription factor PIF1-like [Fragaria vesca subsp.
           vesca]
          Length = 525

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 44/138 (31%), Positives = 67/138 (48%), Gaps = 6/138 (4%)
 Frame = +3

Query: 3   KRDTASILDDAVKYIKALQNQVQMMSIRAGALFQAQYMLQANYPGLQVPQNPHYMHMIPR 182
           K D AS+L++A++Y+K+LQ QVQMMS+  G       M+   +PG+Q         M   
Sbjct: 347 KSDKASMLEEAIEYLKSLQLQVQMMSMGCG-------MVPMMFPGVQPYMPMGMARMGMG 399

Query: 183 IGMGIHGMSSAPLYMMPF---TFPGPWQSNLAASGMPMVGPTPELQQQI---HSYNSFHS 344
           +GMG+    + P  MMP+       P  +  AA+ M    P P  Q Q    +  N   +
Sbjct: 400 MGMGMEMGMNRP--MMPYGNVLAGSPMPTAAAAAHMGPRFPMPAYQMQTMLPNDPNRVQA 457

Query: 345 ADSNMSMANPISASGQNQ 398
            + +  M+NP+    QNQ
Sbjct: 458 TNQSEHMSNPLGTESQNQ 475


>ref|XP_004302325.1| PREDICTED: transcription factor PIF3-like [Fragaria vesca subsp.
           vesca]
          Length = 710

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 40/112 (35%), Positives = 56/112 (50%), Gaps = 19/112 (16%)
 Frame = +3

Query: 3   KRDTASILDDAVKYIKALQNQVQMMSIRAGALFQAQYMLQANYPGLQVPQNPHYMHMIPR 182
           K D AS+LD+A++Y+K LQ QVQ+MS+ AG L+  Q ML      +  P   H+ HM   
Sbjct: 470 KVDKASMLDEAIEYLKTLQLQVQIMSMGAG-LYMPQMMLPPGMQHMHAPHMAHFSHMGMG 528

Query: 183 IGMGI--------------HGMSSAPLYMMP----FTFPG-PWQSNLAASGM 281
           +GMG+               G S  P+  +P      FPG P   + A +GM
Sbjct: 529 MGMGMGLGMGFGMGLPDMNGGSSGYPMLQVPPMQGAHFPGSPMSGHTAFNGM 580


>ref|XP_004247109.1| PREDICTED: transcription factor PIF1-like [Solanum lycopersicum]
          Length = 557

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 39/104 (37%), Positives = 55/104 (52%)
 Frame = +3

Query: 3   KRDTASILDDAVKYIKALQNQVQMMSIRAGALFQAQYMLQANYPGLQVPQNPHYMHMIPR 182
           K D AS+LD+A++Y+K+LQ QVQMMS+  G       M+   YPG+Q    P  M M   
Sbjct: 379 KTDKASMLDEAIEYLKSLQLQVQMMSMGCG-------MVPMMYPGMQPYMPPMGMGM--G 429

Query: 183 IGMGIHGMSSAPLYMMPFTFPGPWQSNLAASGMPMVGPTPELQQ 314
           +GMG+    + P+   P   PG    N AA+    +GP   + Q
Sbjct: 430 MGMGMDIGMNRPMVPYPPLLPGTAMQNAAAAA--QMGPRFSIPQ 471


>ref|XP_006408930.1| hypothetical protein EUTSA_v10001974mg [Eutrema salsugineum]
           gi|557110086|gb|ESQ50383.1| hypothetical protein
           EUTSA_v10001974mg [Eutrema salsugineum]
          Length = 478

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 41/120 (34%), Positives = 62/120 (51%), Gaps = 7/120 (5%)
 Frame = +3

Query: 3   KRDTASILDDAVKYIKALQNQVQMMSIRAGALFQAQYMLQANYPGLQVPQNPHYMHMIPR 182
           K D AS+LD+A++Y+K+LQ Q+QMMS+  G       M+   Y G+Q     HYM   P 
Sbjct: 328 KSDKASMLDEAIEYMKSLQLQIQMMSMGCG-------MMPMMYTGMQ-----HYM---PH 372

Query: 183 IGMGIH-GMSSAPLYMMPF------TFPGPWQSNLAASGMPMVGPTPELQQQIHSYNSFH 341
           + MG+  GM+  P   MPF        P P Q+++++  +    P+  L Q     +S H
Sbjct: 373 MAMGMEMGMNRPPPPFMPFPNMVAAQRPLPTQTHMSSYSVHASDPSRVLYQHFDPTSSSH 432


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