BLASTX nr result
ID: Catharanthus22_contig00038906
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus22_contig00038906
(406 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN71595.1| hypothetical protein VITISV_010143 [Vitis vinifera] 168 6e-40
ref|XP_004252107.1| PREDICTED: uncharacterized protein LOC101259... 132 6e-32
emb|CAN65820.1| hypothetical protein VITISV_042324 [Vitis vinifera] 125 2e-30
gb|AAG51258.1|AC025782_3 Ty1/copia-element polyprotein [Arabidop... 129 2e-30
ref|XP_004240277.1| PREDICTED: uncharacterized protein LOC101248... 126 2e-30
emb|CAN65540.1| hypothetical protein VITISV_029946 [Vitis vinifera] 135 6e-30
emb|CAN68148.1| hypothetical protein VITISV_035665 [Vitis vinifera] 134 1e-29
emb|CAN60829.1| hypothetical protein VITISV_012059 [Vitis vinifera] 120 2e-29
emb|CAN76546.1| hypothetical protein VITISV_010420 [Vitis vinifera] 133 2e-29
gb|AAB87099.1| putative retroelement pol polyprotein [Arabidopsi... 133 2e-29
emb|CAN69190.1| hypothetical protein VITISV_001578 [Vitis vinifera] 121 4e-29
dbj|BAB10503.1| retroelement pol polyprotein-like [Arabidopsis t... 132 5e-29
gb|AAD24600.1| putative retroelement pol polyprotein [Arabidopsi... 132 5e-29
gb|AAG09097.1|AC009323_8 Putative retroelement polyprotein [Arab... 121 8e-29
emb|CAA18107.1| LTR retrotransposon like protein [Arabidopsis th... 131 8e-29
gb|AAG50751.1|AC079733_19 polyprotein, putative [Arabidopsis tha... 131 8e-29
dbj|BAB10743.1| retroelement pol polyprotein-like [Arabidopsis t... 131 1e-28
emb|CAB10225.1| retrovirus-related like polyprotein [Arabidopsis... 131 1e-28
gb|AAD19784.1| putative retroelement pol polyprotein [Arabidopsi... 121 1e-28
emb|CAA72989.1| unnamed protein product [Brassica oleracea var. ... 128 1e-28
>emb|CAN71595.1| hypothetical protein VITISV_010143 [Vitis vinifera]
Length = 1523
Score = 168 bits (426), Expect = 6e-40
Identities = 82/135 (60%), Positives = 96/135 (71%)
Frame = +1
Query: 1 QFSQKVKLNSQ**WP*IHIEKFLSRQRDHSPIKCVSTPQQNRVAERKHRHLLNIA*ALLF 180
QF +VK+ P +F S + C++TPQQN V ERKHRHLLN+A ALLF
Sbjct: 643 QFGSQVKIVRSDNGPEFKHTQFYSSRGILHQTSCINTPQQNGVVERKHRHLLNVARALLF 702
Query: 181 QANLPKQFWGDTILTANYLINRTPTPLLQGKTPFEMLFQKQPAYDHLRVFGCLCFASTHH 360
Q++LPK FWGD ILTA YLINRTPTPLLQGKTPFE LF K P Y HLRVFGC CF STH
Sbjct: 703 QSHLPKPFWGDAILTAAYLINRTPTPLLQGKTPFEKLFHKSPNYSHLRVFGCRCFVSTHP 762
Query: 361 QRPTKFDPKTVRCLF 405
RP+KFDP+++ +F
Sbjct: 763 LRPSKFDPRSIESVF 777
>ref|XP_004252107.1| PREDICTED: uncharacterized protein LOC101259219 [Solanum
lycopersicum]
Length = 986
Score = 132 bits (332), Expect(2) = 6e-32
Identities = 60/102 (58%), Positives = 77/102 (75%)
Frame = +1
Query: 100 CVSTPQQNRVAERKHRHLLNIA*ALLFQANLPKQFWGDTILTANYLINRTPTPLLQGKTP 279
C TPQQN V ERKH++LL A ALLFQ+ LP ++WG+ +LTA YLINR PT LLQGK+P
Sbjct: 750 CPYTPQQNGVVERKHKYLLETARALLFQSKLPMRYWGECVLTATYLINRLPTKLLQGKSP 809
Query: 280 FEMLFQKQPAYDHLRVFGCLCFASTHHQRPTKFDPKTVRCLF 405
+E+L+QK+P Y HL+ FGCLCF +T KF+P+TV +F
Sbjct: 810 YELLYQKKPFYSHLKNFGCLCFPTTLKTHKEKFEPRTVPHIF 851
Score = 30.8 bits (68), Expect(2) = 6e-32
Identities = 15/28 (53%), Positives = 20/28 (71%), Gaps = 3/28 (10%)
Frame = +2
Query: 26 IRSDNGPKFT---LRNFYHDKGIIHQSS 100
IRSDNG +F+ +F+ +KGIIHQ S
Sbjct: 722 IRSDNGLEFSNNEATSFFQEKGIIHQKS 749
>emb|CAN65820.1| hypothetical protein VITISV_042324 [Vitis vinifera]
Length = 1262
Score = 125 bits (314), Expect(2) = 2e-30
Identities = 53/104 (50%), Positives = 74/104 (71%)
Frame = +1
Query: 94 IKCVSTPQQNRVAERKHRHLLNIA*ALLFQANLPKQFWGDTILTANYLINRTPTPLLQGK 273
+ CV TP QN ERKH+HLLN+A +L+FQ+ LP +W D +LT +LINRTP+ +L +
Sbjct: 652 LSCVETPXQNGRVERKHQHLLNVARSLMFQSKLPLSYWTDCVLTXTHLINRTPSSILNNQ 711
Query: 274 TPFEMLFQKQPAYDHLRVFGCLCFASTHHQRPTKFDPKTVRCLF 405
TP+++LFQK P Y++ + FGCLCFAST KF P+ +C+F
Sbjct: 712 TPYQLLFQKPPNYNYFKXFGCLCFASTITNNRGKFQPRATKCIF 755
Score = 32.3 bits (72), Expect(2) = 2e-30
Identities = 13/25 (52%), Positives = 17/25 (68%)
Frame = +2
Query: 26 IRSDNGPKFTLRNFYHDKGIIHQSS 100
+ SDNG +F + FY + GIIHQ S
Sbjct: 629 LXSDNGQEFNMPTFYQEHGIIHQLS 653
>gb|AAG51258.1|AC025782_3 Ty1/copia-element polyprotein [Arabidopsis thaliana]
Length = 1152
Score = 129 bits (323), Expect(2) = 2e-30
Identities = 60/104 (57%), Positives = 76/104 (73%)
Frame = +1
Query: 94 IKCVSTPQQNRVAERKHRHLLNIA*ALLFQANLPKQFWGDTILTANYLINRTPTPLLQGK 273
I CV T QQN ERKHRH+LN+A +LLFQA LP FW +++LTA YLINRTPTP+L GK
Sbjct: 661 ISCVYTHQQNGRVERKHRHILNVARSLLFQAELPISFWEESVLTAAYLINRTPTPILDGK 720
Query: 274 TPFEMLFQKQPAYDHLRVFGCLCFASTHHQRPTKFDPKTVRCLF 405
TP+++L+ + P+Y LRVFG LCFA H R KF + +C+F
Sbjct: 721 TPYKILYSQPPSYASLRVFGSLCFARKHTGRLDKFQERGRKCIF 764
Score = 28.9 bits (63), Expect(2) = 2e-30
Identities = 11/26 (42%), Positives = 22/26 (84%), Gaps = 1/26 (3%)
Frame = +2
Query: 26 IRSDNGPKF-TLRNFYHDKGIIHQSS 100
+RS+NG +F +L++++ ++GI+HQ S
Sbjct: 637 VRSNNGTEFMSLKSYFAERGIVHQIS 662
>ref|XP_004240277.1| PREDICTED: uncharacterized protein LOC101248781 [Solanum
lycopersicum]
Length = 729
Score = 126 bits (316), Expect(2) = 2e-30
Identities = 57/102 (55%), Positives = 75/102 (73%)
Frame = +1
Query: 100 CVSTPQQNRVAERKHRHLLNIA*ALLFQANLPKQFWGDTILTANYLINRTPTPLLQGKTP 279
C TPQQN V E KH++LL A ALLFQ+ +P ++WG+ +LTA YLINR PT LL GK+P
Sbjct: 407 CPYTPQQNGVVEMKHKYLLETARALLFQSKIPVRYWGEYVLTATYLINRLPTKLLPGKSP 466
Query: 280 FEMLFQKQPAYDHLRVFGCLCFASTHHQRPTKFDPKTVRCLF 405
+E+L+QK+P Y HL+ FGCLCF +T KF+P+TV +F
Sbjct: 467 YELLYQKKPFYSHLKNFGCLCFPTTLKTHKDKFEPRTVPHIF 508
Score = 31.6 bits (70), Expect(2) = 2e-30
Identities = 16/28 (57%), Positives = 19/28 (67%), Gaps = 3/28 (10%)
Frame = +2
Query: 26 IRSDNGPKFTLRN---FYHDKGIIHQSS 100
IRSDNG +FT F+ +KGIIHQ S
Sbjct: 379 IRSDNGLEFTSTEATCFFQEKGIIHQKS 406
>emb|CAN65540.1| hypothetical protein VITISV_029946 [Vitis vinifera]
Length = 1240
Score = 135 bits (340), Expect = 6e-30
Identities = 58/102 (56%), Positives = 77/102 (75%)
Frame = +1
Query: 100 CVSTPQQNRVAERKHRHLLNIA*ALLFQANLPKQFWGDTILTANYLINRTPTPLLQGKTP 279
CV TPQQN V ERKH+H+LN+A AL FQ+N+P +WGD +LT+ YLIN+ P+PLL KTP
Sbjct: 519 CVETPQQNSVVERKHQHILNVAXALYFQSNIPIGYWGDCVLTSVYLINQIPSPLLNNKTP 578
Query: 280 FEMLFQKQPAYDHLRVFGCLCFASTHHQRPTKFDPKTVRCLF 405
FE+L+ K P+Y HL+ FGCLC++ST KF P+ + C+F
Sbjct: 579 FELLYHKSPSYSHLKSFGCLCYSSTLPSTRHKFSPRALPCVF 620
>emb|CAN68148.1| hypothetical protein VITISV_035665 [Vitis vinifera]
Length = 1813
Score = 134 bits (337), Expect = 1e-29
Identities = 61/119 (51%), Positives = 83/119 (69%)
Frame = +1
Query: 49 IHIEKFLSRQRDHSPIKCVSTPQQNRVAERKHRHLLNIA*ALLFQANLPKQFWGDTILTA 228
I + FL + C+ TPQQN V ERKHRH+LN+A +L+FQ+N+P +FWG+ +LTA
Sbjct: 899 IPLRIFLQNKGIELQTSCIYTPQQNGVVERKHRHILNVARSLMFQSNVPLEFWGECVLTA 958
Query: 229 NYLINRTPTPLLQGKTPFEMLFQKQPAYDHLRVFGCLCFASTHHQRPTKFDPKTVRCLF 405
YLINR PTPLL K+PFE+L+ + P+ HLRVFGC C+ + H + KFDP+ C+F
Sbjct: 959 VYLINRIPTPLLSNKSPFEVLYNRPPSLTHLRVFGCECYVTNVHPK-QKFDPRASICVF 1016
>emb|CAN60829.1| hypothetical protein VITISV_012059 [Vitis vinifera]
Length = 1128
Score = 120 bits (300), Expect(2) = 2e-29
Identities = 52/104 (50%), Positives = 73/104 (70%)
Frame = +1
Query: 94 IKCVSTPQQNRVAERKHRHLLNIA*ALLFQANLPKQFWGDTILTANYLINRTPTPLLQGK 273
+ CV TP+QN ERKH+HLLN+A +L+FQ+ LP W + +LTA +LIN TP+ +L +
Sbjct: 346 LSCVETPEQNGRVERKHQHLLNVARSLMFQSKLPLSHWTNYVLTATHLINHTPSYILNNQ 405
Query: 274 TPFEMLFQKQPAYDHLRVFGCLCFASTHHQRPTKFDPKTVRCLF 405
TP+++LFQK P Y++ VF CLCFAST KF P+ +C+F
Sbjct: 406 TPYQLLFQKPPNYNYFEVFDCLCFASTITNNRGKFHPRATKCIF 449
Score = 34.7 bits (78), Expect(2) = 2e-29
Identities = 14/25 (56%), Positives = 18/25 (72%)
Frame = +2
Query: 26 IRSDNGPKFTLRNFYHDKGIIHQSS 100
+RSDNG +F + FY + GIIHQ S
Sbjct: 323 LRSDNGQEFNMPTFYQEHGIIHQLS 347
>emb|CAN76546.1| hypothetical protein VITISV_010420 [Vitis vinifera]
Length = 1288
Score = 133 bits (335), Expect = 2e-29
Identities = 62/102 (60%), Positives = 73/102 (71%)
Frame = +1
Query: 100 CVSTPQQNRVAERKHRHLLNIA*ALLFQANLPKQFWGDTILTANYLINRTPTPLLQGKTP 279
CV TPQQN V ERKH+H+LN+A ALLF ++LP +W D ILTA YLINRTP+P L KTP
Sbjct: 561 CVETPQQNSVVERKHQHILNVARALLFXSSLPVCYWSDCILTAVYLINRTPSPFLNNKTP 620
Query: 280 FEMLFQKQPAYDHLRVFGCLCFASTHHQRPTKFDPKTVRCLF 405
FE+L K P Y HLRVFGCLC+ ST TKF P+ +F
Sbjct: 621 FEILHDKLPDYSHLRVFGCLCYVSTLKANRTKFSPRAKAAVF 662
>gb|AAB87099.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1496
Score = 133 bits (335), Expect = 2e-29
Identities = 59/102 (57%), Positives = 79/102 (77%)
Frame = +1
Query: 100 CVSTPQQNRVAERKHRHLLNIA*ALLFQANLPKQFWGDTILTANYLINRTPTPLLQGKTP 279
CV TPQQN ERKHRH+LN+A A LFQ NLP +FWG++ILTA +LINRTP+ +L+GKTP
Sbjct: 649 CVDTPQQNGRVERKHRHILNVARACLFQGNLPVKFWGESILTATHLINRTPSAVLKGKTP 708
Query: 280 FEMLFQKQPAYDHLRVFGCLCFASTHHQRPTKFDPKTVRCLF 405
+E+LF ++P+YD LR FGCLC+A + KF ++ +C+F
Sbjct: 709 YELLFGERPSYDMLRSFGCLCYAHIRPRNKDKFTSRSRKCVF 750
>emb|CAN69190.1| hypothetical protein VITISV_001578 [Vitis vinifera]
Length = 1323
Score = 121 bits (304), Expect(2) = 4e-29
Identities = 57/102 (55%), Positives = 73/102 (71%)
Frame = +1
Query: 100 CVSTPQQNRVAERKHRHLLNIA*ALLFQANLPKQFWGDTILTANYLINRTPTPLLQGKTP 279
CV TPQQN V ERKHRH+L +A AL F A +P QFWG+ LTA ++INR P+P+L KTP
Sbjct: 515 CVYTPQQNGVVERKHRHILQVARALKFHAQVPTQFWGECALTAVHIINRLPSPILSFKTP 574
Query: 280 FEMLFQKQPAYDHLRVFGCLCFASTHHQRPTKFDPKTVRCLF 405
FE+L+ K P+Y HLRVFGCL +A+ H KFD + + +F
Sbjct: 575 FELLYSKPPSYSHLRVFGCLAYATNVH-TSHKFDYRAMPSIF 615
Score = 32.0 bits (71), Expect(2) = 4e-29
Identities = 15/25 (60%), Positives = 19/25 (76%), Gaps = 1/25 (4%)
Frame = +2
Query: 29 RSDNGPKFT-LRNFYHDKGIIHQSS 100
RSDNG +FT LR+F+ D G+I Q S
Sbjct: 490 RSDNGXEFTSLRSFFQDNGVIFQHS 514
>dbj|BAB10503.1| retroelement pol polyprotein-like [Arabidopsis thaliana]
Length = 1475
Score = 132 bits (332), Expect = 5e-29
Identities = 60/102 (58%), Positives = 76/102 (74%)
Frame = +1
Query: 100 CVSTPQQNRVAERKHRHLLNIA*ALLFQANLPKQFWGDTILTANYLINRTPTPLLQGKTP 279
C TPQQN V ERKH+H+LN+A AL+F+AN+P +FWGD IL+A +LINR PTPLL K+P
Sbjct: 733 CPETPQQNSVVERKHQHILNVARALMFEANMPLEFWGDCILSAVFLINRLPTPLLSNKSP 792
Query: 280 FEMLFQKQPAYDHLRVFGCLCFASTHHQRPTKFDPKTVRCLF 405
FE+L K P Y L+VFGCLC+ ST Q+ KF P+ C+F
Sbjct: 793 FELLHLKVPDYTSLKVFGCLCYESTSPQQRHKFAPRARACVF 834
>gb|AAD24600.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1333
Score = 132 bits (332), Expect = 5e-29
Identities = 63/117 (53%), Positives = 81/117 (69%)
Frame = +1
Query: 55 IEKFLSRQRDHSPIKCVSTPQQNRVAERKHRHLLNIA*ALLFQANLPKQFWGDTILTANY 234
+ KF Q CV+TP++N ERKHRHLLN+A AL FQANLP QFWG+ +LTA Y
Sbjct: 524 LTKFFQEQGVIHERSCVATPERNDRVERKHRHLLNVARALRFQANLPIQFWGECVLTAAY 583
Query: 235 LINRTPTPLLQGKTPFEMLFQKQPAYDHLRVFGCLCFASTHHQRPTKFDPKTVRCLF 405
LINRTP+ +L TP+E L +KQP +DHLRVFG LC+A ++ KF ++ RC+F
Sbjct: 584 LINRTPSSVLNDSTPYERLHKKQPRFDHLRVFGSLCYAHNRNRGGDKFAERSRRCVF 640
>gb|AAG09097.1|AC009323_8 Putative retroelement polyprotein [Arabidopsis thaliana]
Length = 1486
Score = 121 bits (304), Expect(2) = 8e-29
Identities = 54/102 (52%), Positives = 71/102 (69%)
Frame = +1
Query: 100 CVSTPQQNRVAERKHRHLLNIA*ALLFQANLPKQFWGDTILTANYLINRTPTPLLQGKTP 279
CV TPQQN ERKHRH+LN+A AL FQ+ LP +FW LTA YLINRTPTPLL+GKTP
Sbjct: 653 CVGTPQQNGRVERKHRHILNVARALRFQSGLPIEFWSYCALTAAYLINRTPTPLLKGKTP 712
Query: 280 FEMLFQKQPAYDHLRVFGCLCFASTHHQRPTKFDPKTVRCLF 405
FE+++ + P H+R+FGC+C+ KF ++ + +F
Sbjct: 713 FELIYNRPPPLQHIRIFGCICYVHNLKHGGDKFASRSNKSIF 754
Score = 31.2 bits (69), Expect(2) = 8e-29
Identities = 15/26 (57%), Positives = 20/26 (76%), Gaps = 1/26 (3%)
Frame = +2
Query: 26 IRSDNGPKFT-LRNFYHDKGIIHQSS 100
IRSDNG +F L +F+ KGIIH++S
Sbjct: 627 IRSDNGSEFICLSDFFAQKGIIHETS 652
>emb|CAA18107.1| LTR retrotransposon like protein [Arabidopsis thaliana]
gi|7269049|emb|CAB79159.1| LTR retrotransposon like
protein [Arabidopsis thaliana]
Length = 1109
Score = 131 bits (330), Expect = 8e-29
Identities = 65/116 (56%), Positives = 81/116 (69%)
Frame = +1
Query: 58 EKFLSRQRDHSPIKCVSTPQQNRVAERKHRHLLNIA*ALLFQANLPKQFWGDTILTANYL 237
E FL + H CV TP QN ERKHRH+LNIA AL FQ+ LP QFWG+ IL+A YL
Sbjct: 426 EYFLHKGIAHET-SCVGTPHQNGRVERKHRHILNIARALRFQSYLPIQFWGECILSAAYL 484
Query: 238 INRTPTPLLQGKTPFEMLFQKQPAYDHLRVFGCLCFASTHHQRPTKFDPKTVRCLF 405
INRTP+ LLQGK+P+EML++ P Y HLRVFG LC+A + + KF ++ RC+F
Sbjct: 485 INRTPSMLLQGKSPYEMLYKTAPKYSHLRVFGSLCYAHNQNHKGDKFAARSRRCVF 540
>gb|AAG50751.1|AC079733_19 polyprotein, putative [Arabidopsis thaliana]
Length = 1468
Score = 131 bits (330), Expect = 8e-29
Identities = 65/116 (56%), Positives = 81/116 (69%)
Frame = +1
Query: 58 EKFLSRQRDHSPIKCVSTPQQNRVAERKHRHLLNIA*ALLFQANLPKQFWGDTILTANYL 237
E FL + H CV TP QN ERKHRH+LNIA AL FQ+ LP QFWG+ IL+A YL
Sbjct: 650 EYFLHKGIAHET-SCVGTPHQNGRVERKHRHILNIARALRFQSYLPIQFWGECILSAAYL 708
Query: 238 INRTPTPLLQGKTPFEMLFQKQPAYDHLRVFGCLCFASTHHQRPTKFDPKTVRCLF 405
INRTP+ LLQGK+P+EML++ P Y HLRVFG LC+A + + KF ++ RC+F
Sbjct: 709 INRTPSMLLQGKSPYEMLYKTAPKYSHLRVFGSLCYAHNQNHKGDKFAARSRRCVF 764
>dbj|BAB10743.1| retroelement pol polyprotein-like [Arabidopsis thaliana]
Length = 1109
Score = 131 bits (329), Expect = 1e-28
Identities = 65/116 (56%), Positives = 81/116 (69%)
Frame = +1
Query: 58 EKFLSRQRDHSPIKCVSTPQQNRVAERKHRHLLNIA*ALLFQANLPKQFWGDTILTANYL 237
E FL + H CV TP QN ERKHRH+LNIA AL FQ+ LP QFWG+ IL+A YL
Sbjct: 426 EYFLHKGITHET-SCVGTPHQNGRVERKHRHILNIARALRFQSYLPIQFWGECILSAAYL 484
Query: 238 INRTPTPLLQGKTPFEMLFQKQPAYDHLRVFGCLCFASTHHQRPTKFDPKTVRCLF 405
INRTP+ LLQGK+P+EML++ P Y HLRVFG LC+A + + KF ++ RC+F
Sbjct: 485 INRTPSMLLQGKSPYEMLYKTAPNYSHLRVFGSLCYAHNQNHKGDKFVARSRRCVF 540
>emb|CAB10225.1| retrovirus-related like polyprotein [Arabidopsis thaliana]
gi|7268152|emb|CAB78488.1| retrovirus-related like
polyprotein [Arabidopsis thaliana]
Length = 1489
Score = 131 bits (329), Expect = 1e-28
Identities = 62/135 (45%), Positives = 84/135 (62%)
Frame = +1
Query: 1 QFSQKVKLNSQ**WP*IHIEKFLSRQRDHSPIKCVSTPQQNRVAERKHRHLLNIA*ALLF 180
QF+ K+K P + + + C TPQQN V ERKH+H+LN+A ALLF
Sbjct: 691 QFNAKIKAIRSDNAPELGFTEIVKEHGMLHHFSCAYTPQQNSVVERKHQHILNVARALLF 750
Query: 181 QANLPKQFWGDTILTANYLINRTPTPLLQGKTPFEMLFQKQPAYDHLRVFGCLCFASTHH 360
Q+N+P Q+W D + TA +LINR P+PLL K+P+E++ KQP Y L+ FGCLCF ST+
Sbjct: 751 QSNIPMQYWSDCVTTAVFLINRLPSPLLNNKSPYELILNKQPDYSLLKNFGCLCFVSTNA 810
Query: 361 QRPTKFDPKTVRCLF 405
TKF P+ C+F
Sbjct: 811 HERTKFTPRARACVF 825
>gb|AAD19784.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1501
Score = 121 bits (304), Expect(2) = 1e-28
Identities = 56/102 (54%), Positives = 73/102 (71%)
Frame = +1
Query: 100 CVSTPQQNRVAERKHRHLLNIA*ALLFQANLPKQFWGDTILTANYLINRTPTPLLQGKTP 279
CV TPQQN ERKHRH+LN+A ALLFQA+LP +FWG++ILTA YLINRTP+ +L G+TP
Sbjct: 676 CVGTPQQNGRVERKHRHILNVARALLFQASLPIKFWGESILTAAYLINRTPSSILSGRTP 735
Query: 280 FEMLFQKQPAYDHLRVFGCLCFASTHHQRPTKFDPKTVRCLF 405
+E+L +P Y LRVFG C+ + KF ++ C+F
Sbjct: 736 YEVLHGSKPVYSQLRVFGSACYVHRVTRDKDKFGQRSRSCIF 777
Score = 30.4 bits (67), Expect(2) = 1e-28
Identities = 13/26 (50%), Positives = 20/26 (76%), Gaps = 1/26 (3%)
Frame = +2
Query: 26 IRSDNGPKFT-LRNFYHDKGIIHQSS 100
+RSDNG +F L +++ + GIIHQ+S
Sbjct: 650 VRSDNGTEFMCLSSYFRENGIIHQTS 675
>emb|CAA72989.1| unnamed protein product [Brassica oleracea var. viridis]
Length = 1131
Score = 128 bits (321), Expect(2) = 1e-28
Identities = 57/102 (55%), Positives = 76/102 (74%)
Frame = +1
Query: 100 CVSTPQQNRVAERKHRHLLNIA*ALLFQANLPKQFWGDTILTANYLINRTPTPLLQGKTP 279
C T +QN V ERKH+HLLN+A AL+FQ+ +P Q+WGD +LTA +LINRTP+PLL K+P
Sbjct: 665 CPETLEQNSVLERKHQHLLNVARALMFQSQVPLQYWGDCVLTAAFLINRTPSPLLANKSP 724
Query: 280 FEMLFQKQPAYDHLRVFGCLCFASTHHQRPTKFDPKTVRCLF 405
+E+L K P YD LR FGCLC+ ST ++ KF P++ C+F
Sbjct: 725 YEVLMGKAPQYDQLRTFGCLCYGSTSPKQRHKFMPRSRACVF 766
Score = 23.9 bits (50), Expect(2) = 1e-28
Identities = 8/25 (32%), Positives = 14/25 (56%)
Frame = +2
Query: 26 IRSDNGPKFTLRNFYHDKGIIHQSS 100
+R DN P+ + + +KGI+ S
Sbjct: 640 VRRDNAPELSFTELFKEKGIVSYHS 664