BLASTX nr result

ID: Catharanthus22_contig00038788 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus22_contig00038788
         (646 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EPS71928.1| hypothetical protein M569_02828, partial [Genlise...    54   4e-12
emb|CAN60689.1| hypothetical protein VITISV_044150 [Vitis vinifera]    51   3e-08
emb|CAN81676.1| hypothetical protein VITISV_040772 [Vitis vinifera]    52   2e-06

>gb|EPS71928.1| hypothetical protein M569_02828, partial [Genlisea aurea]
          Length = 550

 Score = 53.5 bits (127), Expect(4) = 4e-12
 Identities = 20/37 (54%), Positives = 30/37 (81%)
 Frame = +3

Query: 276 PLICYEIVKYHHPSRVM*QFGRDQPMSAACDTQLDLH 386
           PLIC++++++HHP RV+ QFG+ Q + AACDT  D+H
Sbjct: 354 PLICFDVIEFHHPDRVLRQFGQRQSIPAACDTIPDIH 390



 Score = 35.0 bits (79), Expect(4) = 4e-12
 Identities = 17/37 (45%), Positives = 21/37 (56%)
 Frame = +2

Query: 20  PLAPLDAM*CTSFDLSQLPTHVLLTYRDQLDFMSSDQ 130
           P AP  +     F L  + THVL+ YRDQLD M  +Q
Sbjct: 288 PAAPYGSRWNVGFKLESVGTHVLVLYRDQLDNMKDEQ 324



 Score = 26.6 bits (57), Expect(4) = 4e-12
 Identities = 16/50 (32%), Positives = 24/50 (48%), Gaps = 1/50 (2%)
 Frame = +1

Query: 448 VWHQ*RQHIRDGLLLPVEDLSSP*DD-YIRWYRDIKLVFINNPAHRCDTG 594
           +WH  R ++      P++  +   DD Y+ WY+ I    I NP  R  TG
Sbjct: 412 MWHNRRANVVTAP--PIDGPADRNDDSYMEWYQRITRSVIGNPVTRPHTG 459



 Score = 20.8 bits (42), Expect(4) = 4e-12
 Identities = 7/9 (77%), Positives = 7/9 (77%)
 Frame = +1

Query: 205 DAQFVWLPY 231
           D QFVW PY
Sbjct: 322 DEQFVWEPY 330


>emb|CAN60689.1| hypothetical protein VITISV_044150 [Vitis vinifera]
          Length = 1001

 Score = 51.2 bits (121), Expect(2) = 3e-08
 Identities = 24/48 (50%), Positives = 31/48 (64%)
 Frame = +3

Query: 276 PLICYEIVKYHHPSRVM*QFGRDQPMSAACDTQLDLH*LQLRENDHTY 419
           PLIC++IV++HHP RV+ QFG  Q +   CDT L LH +  R   H Y
Sbjct: 477 PLICFDIVEWHHPDRVLRQFGFRQGIPRPCDTNLKLHSID-RRGRHDY 523



 Score = 32.7 bits (73), Expect(2) = 3e-08
 Identities = 17/49 (34%), Positives = 25/49 (51%)
 Frame = +1

Query: 493 PVEDLSSP*DDYIRWYRDIKLVFINNPAHRCDTGTIGYQPTGVDRRMMI 639
           P +   S  D Y+ WYR I   F+   A R +T   G+QPT V   +++
Sbjct: 548 PEQQPMSHYDPYMEWYRSITRRFVTPLADRSNT---GFQPTAVTTHLLV 593


>emb|CAN81676.1| hypothetical protein VITISV_040772 [Vitis vinifera]
          Length = 644

 Score = 51.6 bits (122), Expect(2) = 2e-06
 Identities = 22/42 (52%), Positives = 30/42 (71%)
 Frame = +3

Query: 276 PLICYEIVKYHHPSRVM*QFGRDQPMSAACDTQLDLH*LQLR 401
           PLIC+EIV++HHP RV+ QFG  Q +   CDT+ +LH +  R
Sbjct: 366 PLICFEIVEWHHPDRVLRQFGLRQGIPDTCDTEKELHKIDRR 407



 Score = 26.2 bits (56), Expect(2) = 2e-06
 Identities = 20/73 (27%), Positives = 29/73 (39%)
 Frame = +1

Query: 421 RRWSMLLVLVWHQ*RQHIRDGLLLPVEDLSSP*DDYIRWYRDIKLVFINNPAHRCDTGTI 600
           RR+    + +W Q  Q I   +  P E      D Y+ WYR I   FI   A       +
Sbjct: 415 RRYHAHYIRLWEQREQSIVTAV--PNEHPMDYHDPYMEWYRSITRRFI---APLTQRPHM 469

Query: 601 GYQPTGVDRRMMI 639
            Y PT     +++
Sbjct: 470 QYHPTAATSHLLV 482


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