BLASTX nr result
ID: Catharanthus22_contig00038693
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus22_contig00038693
(321 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002511138.1| DNA binding protein, putative [Ricinus commu... 128 9e-28
ref|XP_006347622.1| PREDICTED: SWI/SNF complex subunit SWI3A-lik... 125 7e-27
ref|XP_004168975.1| PREDICTED: SWI/SNF complex subunit SWI3A-lik... 124 1e-26
ref|XP_004138253.1| PREDICTED: SWI/SNF complex subunit SWI3A-lik... 124 1e-26
gb|EXB25272.1| SWI/SNF complex subunit SWI3A [Morus notabilis] 123 2e-26
ref|XP_004235292.1| PREDICTED: SWI/SNF complex subunit SWI3A-lik... 123 3e-26
gb|EOY22550.1| Chromatin remodeling complex subunit, putative is... 120 1e-25
gb|EOY22549.1| Chromatin remodeling complex subunit, putative is... 120 1e-25
gb|EOY22547.1| Chromatin remodeling complex subunit, putative is... 120 1e-25
gb|EOY22546.1| Chromatin remodeling complex subunit, putative is... 120 1e-25
gb|EMJ10292.1| hypothetical protein PRUPE_ppa003602mg [Prunus pe... 120 1e-25
ref|XP_002280389.1| PREDICTED: SWI/SNF complex subunit SWI3A [Vi... 120 2e-25
emb|CAN80839.1| hypothetical protein VITISV_043833 [Vitis vinifera] 120 2e-25
ref|XP_006436883.1| hypothetical protein CICLE_v10031125mg [Citr... 114 1e-23
ref|XP_003527961.2| PREDICTED: SWI/SNF complex subunit SWI3A-lik... 113 3e-23
gb|EPS62444.1| hypothetical protein M569_12346, partial [Genlise... 113 3e-23
ref|XP_004297521.1| PREDICTED: SWI/SNF complex subunit SWI3A-lik... 112 7e-23
gb|ESW09501.1| hypothetical protein PHAVU_009G132800g [Phaseolus... 110 2e-22
ref|XP_003602787.1| SWI/SNF complex subunit SMARCC2 [Medicago tr... 110 2e-22
ref|XP_003523412.1| PREDICTED: SWI/SNF complex subunit SWI3A-lik... 108 6e-22
>ref|XP_002511138.1| DNA binding protein, putative [Ricinus communis]
gi|223550253|gb|EEF51740.1| DNA binding protein,
putative [Ricinus communis]
Length = 547
Score = 128 bits (321), Expect = 9e-28
Identities = 58/73 (79%), Positives = 64/73 (87%)
Frame = +2
Query: 98 PNSSDERRHDLYTIPSYSSWFSWSNIHEIERISLREFFDGSSITRTPRIYKEYRDFIISK 277
P +E DLYTIPSYSSWF+W NIHE ER +L+EFFDGSSITRTP+IYKEYRDFII+K
Sbjct: 8 PTRREEPEFDLYTIPSYSSWFAWDNIHETERAALKEFFDGSSITRTPKIYKEYRDFIINK 67
Query: 278 YREDPSRRLTFTE 316
YREDPSRRLTFTE
Sbjct: 68 YREDPSRRLTFTE 80
>ref|XP_006347622.1| PREDICTED: SWI/SNF complex subunit SWI3A-like [Solanum tuberosum]
Length = 573
Score = 125 bits (313), Expect = 7e-27
Identities = 54/71 (76%), Positives = 67/71 (94%)
Frame = +2
Query: 104 SSDERRHDLYTIPSYSSWFSWSNIHEIERISLREFFDGSSITRTPRIYKEYRDFIISKYR 283
SS+E HDLYTIPSY+SWFSW +IHE+ER+SLREFFDGSSI+RTPRIYKEYRD++I+ YR
Sbjct: 9 SSNEPTHDLYTIPSYTSWFSWQSIHEVERLSLREFFDGSSISRTPRIYKEYRDYMITSYR 68
Query: 284 EDPSRRLTFTE 316
EDP+RRL+F++
Sbjct: 69 EDPTRRLSFSD 79
>ref|XP_004168975.1| PREDICTED: SWI/SNF complex subunit SWI3A-like [Cucumis sativus]
Length = 566
Score = 124 bits (311), Expect = 1e-26
Identities = 59/84 (70%), Positives = 72/84 (85%)
Frame = +2
Query: 65 SNLKEPSNFKPPNSSDERRHDLYTIPSYSSWFSWSNIHEIERISLREFFDGSSITRTPRI 244
++L+EPS + P DE DLYTIPS+SSWFSW +IHE E+++L+EFFDGSSI+RTPRI
Sbjct: 3 ASLREPSYRRAP---DEPDLDLYTIPSHSSWFSWDDIHETEKLALKEFFDGSSISRTPRI 59
Query: 245 YKEYRDFIISKYREDPSRRLTFTE 316
YKEYRDFII+KYRE+PS RLTFTE
Sbjct: 60 YKEYRDFIINKYREEPSSRLTFTE 83
>ref|XP_004138253.1| PREDICTED: SWI/SNF complex subunit SWI3A-like [Cucumis sativus]
Length = 566
Score = 124 bits (311), Expect = 1e-26
Identities = 59/84 (70%), Positives = 72/84 (85%)
Frame = +2
Query: 65 SNLKEPSNFKPPNSSDERRHDLYTIPSYSSWFSWSNIHEIERISLREFFDGSSITRTPRI 244
++L+EPS + P DE DLYTIPS+SSWFSW +IHE E+++L+EFFDGSSI+RTPRI
Sbjct: 3 ASLREPSYRRAP---DEPDLDLYTIPSHSSWFSWDDIHETEKLALKEFFDGSSISRTPRI 59
Query: 245 YKEYRDFIISKYREDPSRRLTFTE 316
YKEYRDFII+KYRE+PS RLTFTE
Sbjct: 60 YKEYRDFIINKYREEPSSRLTFTE 83
>gb|EXB25272.1| SWI/SNF complex subunit SWI3A [Morus notabilis]
Length = 564
Score = 123 bits (309), Expect = 2e-26
Identities = 57/69 (82%), Positives = 63/69 (91%)
Frame = +2
Query: 110 DERRHDLYTIPSYSSWFSWSNIHEIERISLREFFDGSSITRTPRIYKEYRDFIISKYRED 289
DE DLYTIPS+SSWF W IHEIERISL+EFFDGSSI+RTP+IYKEYRDFII+KYRE+
Sbjct: 16 DEPELDLYTIPSHSSWFVWDEIHEIERISLKEFFDGSSISRTPKIYKEYRDFIINKYREE 75
Query: 290 PSRRLTFTE 316
PSRRLTFTE
Sbjct: 76 PSRRLTFTE 84
>ref|XP_004235292.1| PREDICTED: SWI/SNF complex subunit SWI3A-like [Solanum
lycopersicum]
Length = 573
Score = 123 bits (308), Expect = 3e-26
Identities = 54/71 (76%), Positives = 66/71 (92%)
Frame = +2
Query: 104 SSDERRHDLYTIPSYSSWFSWSNIHEIERISLREFFDGSSITRTPRIYKEYRDFIISKYR 283
SS+E HDLYTIPSY+SWFSW +IHE+ER+SLREFFD SSITRTPRIYKEYRD+II+ YR
Sbjct: 9 SSNELAHDLYTIPSYTSWFSWQSIHEVERLSLREFFDCSSITRTPRIYKEYRDYIITSYR 68
Query: 284 EDPSRRLTFTE 316
+DP+RRL+F++
Sbjct: 69 QDPTRRLSFSD 79
>gb|EOY22550.1| Chromatin remodeling complex subunit, putative isoform 5 [Theobroma
cacao]
Length = 461
Score = 120 bits (302), Expect = 1e-25
Identities = 59/89 (66%), Positives = 73/89 (82%), Gaps = 2/89 (2%)
Frame = +2
Query: 56 METSNLKEPSNFKPPNSS--DERRHDLYTIPSYSSWFSWSNIHEIERISLREFFDGSSIT 229
ME + +P+ P S+ +E DLYTIPSYSSWF+W++IHE ER +L+EFF+GSSI+
Sbjct: 31 MENNTRHDPN----PESTRPEEPELDLYTIPSYSSWFAWNDIHETERQALKEFFEGSSIS 86
Query: 230 RTPRIYKEYRDFIISKYREDPSRRLTFTE 316
RTP+IYKEYRDFII+KYREDPSRRLTFTE
Sbjct: 87 RTPKIYKEYRDFIINKYREDPSRRLTFTE 115
>gb|EOY22549.1| Chromatin remodeling complex subunit, putative isoform 4 [Theobroma
cacao]
Length = 473
Score = 120 bits (302), Expect = 1e-25
Identities = 59/89 (66%), Positives = 73/89 (82%), Gaps = 2/89 (2%)
Frame = +2
Query: 56 METSNLKEPSNFKPPNSS--DERRHDLYTIPSYSSWFSWSNIHEIERISLREFFDGSSIT 229
ME + +P+ P S+ +E DLYTIPSYSSWF+W++IHE ER +L+EFF+GSSI+
Sbjct: 31 MENNTRHDPN----PESTRPEEPELDLYTIPSYSSWFAWNDIHETERQALKEFFEGSSIS 86
Query: 230 RTPRIYKEYRDFIISKYREDPSRRLTFTE 316
RTP+IYKEYRDFII+KYREDPSRRLTFTE
Sbjct: 87 RTPKIYKEYRDFIINKYREDPSRRLTFTE 115
>gb|EOY22547.1| Chromatin remodeling complex subunit, putative isoform 2 [Theobroma
cacao]
Length = 486
Score = 120 bits (302), Expect = 1e-25
Identities = 59/89 (66%), Positives = 73/89 (82%), Gaps = 2/89 (2%)
Frame = +2
Query: 56 METSNLKEPSNFKPPNSS--DERRHDLYTIPSYSSWFSWSNIHEIERISLREFFDGSSIT 229
ME + +P+ P S+ +E DLYTIPSYSSWF+W++IHE ER +L+EFF+GSSI+
Sbjct: 31 MENNTRHDPN----PESTRPEEPELDLYTIPSYSSWFAWNDIHETERQALKEFFEGSSIS 86
Query: 230 RTPRIYKEYRDFIISKYREDPSRRLTFTE 316
RTP+IYKEYRDFII+KYREDPSRRLTFTE
Sbjct: 87 RTPKIYKEYRDFIINKYREDPSRRLTFTE 115
>gb|EOY22546.1| Chromatin remodeling complex subunit, putative isoform 1 [Theobroma
cacao]
Length = 595
Score = 120 bits (302), Expect = 1e-25
Identities = 59/89 (66%), Positives = 73/89 (82%), Gaps = 2/89 (2%)
Frame = +2
Query: 56 METSNLKEPSNFKPPNSS--DERRHDLYTIPSYSSWFSWSNIHEIERISLREFFDGSSIT 229
ME + +P+ P S+ +E DLYTIPSYSSWF+W++IHE ER +L+EFF+GSSI+
Sbjct: 31 MENNTRHDPN----PESTRPEEPELDLYTIPSYSSWFAWNDIHETERQALKEFFEGSSIS 86
Query: 230 RTPRIYKEYRDFIISKYREDPSRRLTFTE 316
RTP+IYKEYRDFII+KYREDPSRRLTFTE
Sbjct: 87 RTPKIYKEYRDFIINKYREDPSRRLTFTE 115
>gb|EMJ10292.1| hypothetical protein PRUPE_ppa003602mg [Prunus persica]
Length = 563
Score = 120 bits (302), Expect = 1e-25
Identities = 54/69 (78%), Positives = 62/69 (89%)
Frame = +2
Query: 110 DERRHDLYTIPSYSSWFSWSNIHEIERISLREFFDGSSITRTPRIYKEYRDFIISKYRED 289
DE DLYTIPS+SSWFSW IHE ERI+L+E+FDGSSI+RTP+ YKEYRDFI+SKYRED
Sbjct: 16 DEPELDLYTIPSHSSWFSWDEIHETERIALKEYFDGSSISRTPKTYKEYRDFIVSKYRED 75
Query: 290 PSRRLTFTE 316
PSR+LTFTE
Sbjct: 76 PSRKLTFTE 84
>ref|XP_002280389.1| PREDICTED: SWI/SNF complex subunit SWI3A [Vitis vinifera]
gi|297734457|emb|CBI15704.3| unnamed protein product
[Vitis vinifera]
Length = 563
Score = 120 bits (301), Expect = 2e-25
Identities = 56/69 (81%), Positives = 61/69 (88%)
Frame = +2
Query: 110 DERRHDLYTIPSYSSWFSWSNIHEIERISLREFFDGSSITRTPRIYKEYRDFIISKYRED 289
DE DLYTIP +SSWFSW IHE E+ISL+EFFDGSSI+RTP+IYKEYRDFIISKYRED
Sbjct: 15 DEPELDLYTIPIHSSWFSWDEIHEKEKISLKEFFDGSSISRTPKIYKEYRDFIISKYRED 74
Query: 290 PSRRLTFTE 316
PSRRLTF E
Sbjct: 75 PSRRLTFAE 83
>emb|CAN80839.1| hypothetical protein VITISV_043833 [Vitis vinifera]
Length = 563
Score = 120 bits (301), Expect = 2e-25
Identities = 56/69 (81%), Positives = 61/69 (88%)
Frame = +2
Query: 110 DERRHDLYTIPSYSSWFSWSNIHEIERISLREFFDGSSITRTPRIYKEYRDFIISKYRED 289
DE DLYTIP +SSWFSW IHE E+ISL+EFFDGSSI+RTP+IYKEYRDFIISKYRED
Sbjct: 15 DEPELDLYTIPIHSSWFSWDEIHEKEKISLKEFFDGSSISRTPKIYKEYRDFIISKYRED 74
Query: 290 PSRRLTFTE 316
PSRRLTF E
Sbjct: 75 PSRRLTFAE 83
>ref|XP_006436883.1| hypothetical protein CICLE_v10031125mg [Citrus clementina]
gi|568880684|ref|XP_006493240.1| PREDICTED: SWI/SNF
complex subunit SWI3A-like [Citrus sinensis]
gi|557539079|gb|ESR50123.1| hypothetical protein
CICLE_v10031125mg [Citrus clementina]
Length = 558
Score = 114 bits (286), Expect = 1e-23
Identities = 52/73 (71%), Positives = 64/73 (87%)
Frame = +2
Query: 98 PNSSDERRHDLYTIPSYSSWFSWSNIHEIERISLREFFDGSSITRTPRIYKEYRDFIISK 277
PN+ E +LYTIPS+SSWF W +IHE ER +L+EFFDGSSI+RTP+IYKEYRDF+I+K
Sbjct: 8 PNTKPE--FELYTIPSHSSWFRWDDIHETERTALKEFFDGSSISRTPKIYKEYRDFMINK 65
Query: 278 YREDPSRRLTFTE 316
YRE+PSRRLTFT+
Sbjct: 66 YREEPSRRLTFTQ 78
>ref|XP_003527961.2| PREDICTED: SWI/SNF complex subunit SWI3A-like [Glycine max]
Length = 523
Score = 113 bits (282), Expect = 3e-23
Identities = 53/75 (70%), Positives = 62/75 (82%)
Frame = +2
Query: 92 KPPNSSDERRHDLYTIPSYSSWFSWSNIHEIERISLREFFDGSSITRTPRIYKEYRDFII 271
K PNS E +LYTIPS S WF+W IHE ER + +E+FDG+SITRTP+IYKEYRDFII
Sbjct: 6 KDPNSDFEL--ELYTIPSSSRWFAWEEIHETERTAFKEYFDGNSITRTPKIYKEYRDFII 63
Query: 272 SKYREDPSRRLTFTE 316
+KYRE+PSRRLTFTE
Sbjct: 64 NKYREEPSRRLTFTE 78
>gb|EPS62444.1| hypothetical protein M569_12346, partial [Genlisea aurea]
Length = 522
Score = 113 bits (282), Expect = 3e-23
Identities = 48/62 (77%), Positives = 60/62 (96%)
Frame = +2
Query: 131 YTIPSYSSWFSWSNIHEIERISLREFFDGSSITRTPRIYKEYRDFIISKYREDPSRRLTF 310
Y +PS+SSWFSW++IHE+ER+SL EFF+GSSITR+PR+YKEYRDFII+KYRE+PSR+LTF
Sbjct: 11 YAVPSHSSWFSWNDIHEVERLSLTEFFNGSSITRSPRVYKEYRDFIITKYRENPSRKLTF 70
Query: 311 TE 316
TE
Sbjct: 71 TE 72
>ref|XP_004297521.1| PREDICTED: SWI/SNF complex subunit SWI3A-like [Fragaria vesca
subsp. vesca]
Length = 549
Score = 112 bits (279), Expect = 7e-23
Identities = 49/69 (71%), Positives = 59/69 (85%)
Frame = +2
Query: 110 DERRHDLYTIPSYSSWFSWSNIHEIERISLREFFDGSSITRTPRIYKEYRDFIISKYRED 289
DE DLYTIPS++SWF W IHE E+ L+EFFDG SI+RTP++YKEYRDFII+KYRED
Sbjct: 13 DEPELDLYTIPSHTSWFLWDEIHETEKKGLKEFFDGRSISRTPKVYKEYRDFIINKYRED 72
Query: 290 PSRRLTFTE 316
P+R+LTFTE
Sbjct: 73 PARKLTFTE 81
>gb|ESW09501.1| hypothetical protein PHAVU_009G132800g [Phaseolus vulgaris]
Length = 537
Score = 110 bits (274), Expect = 2e-22
Identities = 53/87 (60%), Positives = 65/87 (74%)
Frame = +2
Query: 56 METSNLKEPSNFKPPNSSDERRHDLYTIPSYSSWFSWSNIHEIERISLREFFDGSSITRT 235
ME S K+P++ + +LYTIPS S WF+W IHE ER + +EFFD SSI+RT
Sbjct: 1 MEVS--KDPNSNPGHFEDSDSELELYTIPSSSRWFAWDEIHETERTAFKEFFDASSISRT 58
Query: 236 PRIYKEYRDFIISKYREDPSRRLTFTE 316
P+IYKEYRDFII+KYRE+PSRRLTFTE
Sbjct: 59 PKIYKEYRDFIINKYREEPSRRLTFTE 85
>ref|XP_003602787.1| SWI/SNF complex subunit SMARCC2 [Medicago truncatula]
gi|355491835|gb|AES73038.1| SWI/SNF complex subunit
SMARCC2 [Medicago truncatula]
Length = 540
Score = 110 bits (274), Expect = 2e-22
Identities = 51/75 (68%), Positives = 61/75 (81%)
Frame = +2
Query: 92 KPPNSSDERRHDLYTIPSYSSWFSWSNIHEIERISLREFFDGSSITRTPRIYKEYRDFII 271
K P S E +LYTIPS S WF+W IHE E+ + +E+FDG+SITRTP+IYKEYRDFII
Sbjct: 5 KDPISDSEL--ELYTIPSSSKWFAWDEIHETEKTAFKEYFDGTSITRTPKIYKEYRDFII 62
Query: 272 SKYREDPSRRLTFTE 316
+KYRE+PSRRLTFTE
Sbjct: 63 NKYREEPSRRLTFTE 77
>ref|XP_003523412.1| PREDICTED: SWI/SNF complex subunit SWI3A-like [Glycine max]
Length = 527
Score = 108 bits (271), Expect = 6e-22
Identities = 50/77 (64%), Positives = 62/77 (80%), Gaps = 2/77 (2%)
Frame = +2
Query: 92 KPPNSS--DERRHDLYTIPSYSSWFSWSNIHEIERISLREFFDGSSITRTPRIYKEYRDF 265
K PNS + +LYTIPS S WF+W IHE ER + +E+FDGSSI+R+P+IYKEYRDF
Sbjct: 5 KDPNSQADSDSELELYTIPSSSRWFAWEEIHETERAAFKEYFDGSSISRSPKIYKEYRDF 64
Query: 266 IISKYREDPSRRLTFTE 316
II+KYRE+PSRRLTF+E
Sbjct: 65 IINKYREEPSRRLTFSE 81