BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus22_contig00038482
         (308 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_008081324.1| hypothetical chloroplast RF1 (chloroplast) [...   174   8e-42
gb|ADD30910.1| putative RF1 protein [Nerium oleander]                 160   1e-37
ref|YP_817540.1| hypothetical chloroplast RF1 [Coffea arabica] g...   153   3e-35
gb|AFI72634.1| Ycf1, partial [Meehania cordata]                       145   5e-33
gb|ADX62232.1| Ycf1, partial (chloroplast) [Meehania urticifolia]     145   7e-33
gb|ADX62188.1| Ycf1, partial (chloroplast) [Glechoma hederacea]       145   7e-33
gb|ADD30913.1| putative RF1 protein [Berberidopsis corallina]         145   7e-33
gb|AFK81358.1| hypothetical chloroplast RF19 [Camellia sinensis ...   144   9e-33
ref|YP_007317307.1| Ycf1 (chloroplast) [Camellia sinensis] gi|43...   144   9e-33
gb|AFI72624.1| Ycf1, partial [Gmelina arborea]                        144   9e-33
gb|ADD30905.1| putative RF1 protein [Ehretia acuminata]               144   9e-33
ref|YP_007353973.1| Ycf1 protein (chloroplast) [Tectona grandis]...   144   1e-32
gb|AFI72654.1| Ycf1, partial [Thymus serpyllum]                       144   1e-32
gb|AFI72653.1| Ycf1, partial [Thymus pulegioides]                     144   1e-32
gb|AFI72647.1| Ycf1, partial [Pseudocarpidium wrightii]               144   1e-32
gb|ADD30903.1| putative RF1 protein [Aucuba japonica]                 144   1e-32
gb|AFI72631.1| Ycf1, partial [Lindernia dubia]                        144   2e-32
gb|AFI72622.1| Ycf1, partial [Dracocephalum parviflorum]              144   2e-32
gb|ADX62194.1| Ycf1, partial (chloroplast) [Horminum pyrenaicum]      144   2e-32
gb|AFI72615.1| Ycf1, partial [Congea griffithiana]                    143   2e-32

>ref|YP_008081324.1| hypothetical chloroplast RF1 (chloroplast) [Catharanthus roseus]
            gi|474452135|gb|AGI51203.1| hypothetical chloroplast RF1
            (chloroplast) [Catharanthus roseus]
          Length = 1748

 Score =  174 bits (442), Expect = 8e-42
 Identities = 91/102 (89%), Positives = 91/102 (89%)
 Frame = -3

Query: 306  DMEDPYTXXXXXXXXXXXSNTGAELDFFLKRYLLFQLRWGDALNQRMMNNIKIYCLLLRL 127
            DMEDPYT           SNTGAELDFFLKRYLLFQLRWGDALNQRMMNNIKIYCLLLRL
Sbjct: 1500 DMEDPYTKSKRKGGKKYKSNTGAELDFFLKRYLLFQLRWGDALNQRMMNNIKIYCLLLRL 1559

Query: 126  INPRKITISSIQRREMSLDIMLIQKNLSLAELIKRGVLIIEP 1
            INPRKITISSIQRREMSLDIMLIQKNLSLAELIKRGVLIIEP
Sbjct: 1560 INPRKITISSIQRREMSLDIMLIQKNLSLAELIKRGVLIIEP 1601


>gb|ADD30910.1| putative RF1 protein [Nerium oleander]
          Length = 1834

 Score =  160 bits (406), Expect = 1e-37
 Identities = 85/102 (83%), Positives = 88/102 (86%)
 Frame = -3

Query: 306  DMEDPYTXXXXXXXXXXXSNTGAELDFFLKRYLLFQLRWGDALNQRMMNNIKIYCLLLRL 127
            D+EDPY             NTGAELD FLKRYLLFQLRWG+ALNQRM+NNIKIYCLLLRL
Sbjct: 1588 DIEDPYDARKGGKKYKS--NTGAELDLFLKRYLLFQLRWGNALNQRMINNIKIYCLLLRL 1645

Query: 126  INPRKITISSIQRREMSLDIMLIQKNLSLAELIKRGVLIIEP 1
            INPRKITISSIQRREMSLDIMLIQKNLSLAELIKRGVLIIEP
Sbjct: 1646 INPRKITISSIQRREMSLDIMLIQKNLSLAELIKRGVLIIEP 1687


>ref|YP_817540.1| hypothetical chloroplast RF1 [Coffea arabica]
            gi|122153677|sp|A0A393.1|YCF1_COFAR RecName:
            Full=Putative membrane protein ycf1; Short=RF1
            gi|116242222|gb|ABJ89737.1| hypothetical chloroplast RF1
            [Coffea arabica]
          Length = 1874

 Score =  153 bits (386), Expect = 3e-35
 Identities = 76/82 (92%), Positives = 80/82 (97%)
 Frame = -3

Query: 246  TGAELDFFLKRYLLFQLRWGDALNQRMMNNIKIYCLLLRLINPRKITISSIQRREMSLDI 67
            T AELDFFLKRYL+FQLRWGDALNQRM+NN+KIYCLLLRLINPRKITISSIQRREMSLDI
Sbjct: 1643 TEAELDFFLKRYLVFQLRWGDALNQRMINNVKIYCLLLRLINPRKITISSIQRREMSLDI 1702

Query: 66   MLIQKNLSLAELIKRGVLIIEP 1
            MLIQKNLSL ELIKRGVL+IEP
Sbjct: 1703 MLIQKNLSLTELIKRGVLVIEP 1724


>gb|AFI72634.1| Ycf1, partial [Meehania cordata]
          Length = 1525

 Score =  145 bits (366), Expect = 5e-33
 Identities = 70/83 (84%), Positives = 80/83 (96%)
 Frame = -3

Query: 249  NTGAELDFFLKRYLLFQLRWGDALNQRMMNNIKIYCLLLRLINPRKITISSIQRREMSLD 70
            NT AELDFFLKRYLLFQLRWG  LNQRM+NNIK+YCLLLRL++PRKITISSIQ+REMSLD
Sbjct: 1270 NTEAELDFFLKRYLLFQLRWGPTLNQRMINNIKVYCLLLRLLDPRKITISSIQKREMSLD 1329

Query: 69   IMLIQKNLSLAELIKRGVLIIEP 1
            IMLIQKNL+L+EL+K+GVLI+EP
Sbjct: 1330 IMLIQKNLTLSELMKKGVLIVEP 1352


>gb|ADX62232.1| Ycf1, partial (chloroplast) [Meehania urticifolia]
          Length = 1530

 Score =  145 bits (365), Expect = 7e-33
 Identities = 70/83 (84%), Positives = 80/83 (96%)
 Frame = -3

Query: 249  NTGAELDFFLKRYLLFQLRWGDALNQRMMNNIKIYCLLLRLINPRKITISSIQRREMSLD 70
            NT AELDFFLKRYLLFQLRWG  LNQRM+NNIK+YCLLLRL++PRKITISSIQ+REMSLD
Sbjct: 1275 NTEAELDFFLKRYLLFQLRWGATLNQRMINNIKVYCLLLRLLDPRKITISSIQKREMSLD 1334

Query: 69   IMLIQKNLSLAELIKRGVLIIEP 1
            IMLIQKNL+L+EL+K+GVLI+EP
Sbjct: 1335 IMLIQKNLTLSELMKKGVLIVEP 1357


>gb|ADX62188.1| Ycf1, partial (chloroplast) [Glechoma hederacea]
          Length = 1526

 Score =  145 bits (365), Expect = 7e-33
 Identities = 70/83 (84%), Positives = 80/83 (96%)
 Frame = -3

Query: 249  NTGAELDFFLKRYLLFQLRWGDALNQRMMNNIKIYCLLLRLINPRKITISSIQRREMSLD 70
            NT AELDFFLKRYLLFQLRWG  LNQRM+NNIK+YCLLLRL++PRKITISSIQ+REMSLD
Sbjct: 1271 NTEAELDFFLKRYLLFQLRWGATLNQRMINNIKVYCLLLRLLDPRKITISSIQKREMSLD 1330

Query: 69   IMLIQKNLSLAELIKRGVLIIEP 1
            IMLIQKNL+L+EL+K+GVLI+EP
Sbjct: 1331 IMLIQKNLTLSELMKKGVLIVEP 1353


>gb|ADD30913.1| putative RF1 protein [Berberidopsis corallina]
          Length = 1909

 Score =  145 bits (365), Expect = 7e-33
 Identities = 70/83 (84%), Positives = 78/83 (93%)
 Frame = -3

Query: 249  NTGAELDFFLKRYLLFQLRWGDALNQRMMNNIKIYCLLLRLINPRKITISSIQRREMSLD 70
            NT AELDFFLKRYLLFQLRW D LNQR++NNIK+YCLLLRLINPR+I ISSIQRREMSLD
Sbjct: 1655 NTEAELDFFLKRYLLFQLRWNDPLNQRLINNIKVYCLLLRLINPREIAISSIQRREMSLD 1714

Query: 69   IMLIQKNLSLAELIKRGVLIIEP 1
            IMLIQKNL+L EL+KRG+L+IEP
Sbjct: 1715 IMLIQKNLTLTELMKRGILVIEP 1737


>gb|AFK81358.1| hypothetical chloroplast RF19 [Camellia sinensis var. assamica]
          Length = 1875

 Score =  144 bits (364), Expect = 9e-33
 Identities = 71/83 (85%), Positives = 79/83 (95%)
 Frame = -3

Query: 249  NTGAELDFFLKRYLLFQLRWGDALNQRMMNNIKIYCLLLRLINPRKITISSIQRREMSLD 70
            NT AELDFFLK+YLLFQLRW +ALNQRM+NNIK+YCLLLRL NPRKITISSIQRREM+LD
Sbjct: 1618 NTEAELDFFLKKYLLFQLRWDNALNQRMINNIKVYCLLLRLRNPRKITISSIQRREMNLD 1677

Query: 69   IMLIQKNLSLAELIKRGVLIIEP 1
            IMLIQKNL+L EL+KRG+LIIEP
Sbjct: 1678 IMLIQKNLTLTELMKRGILIIEP 1700


>ref|YP_007317307.1| Ycf1 (chloroplast) [Camellia sinensis] gi|430728331|gb|AGA55655.1|
            Ycf1 (chloroplast) [Camellia sinensis]
          Length = 1873

 Score =  144 bits (364), Expect = 9e-33
 Identities = 71/83 (85%), Positives = 79/83 (95%)
 Frame = -3

Query: 249  NTGAELDFFLKRYLLFQLRWGDALNQRMMNNIKIYCLLLRLINPRKITISSIQRREMSLD 70
            NT AELDFFLK+YLLFQLRW +ALNQRM+NNIK+YCLLLRL NPRKITISSIQRREM+LD
Sbjct: 1618 NTEAELDFFLKKYLLFQLRWDNALNQRMINNIKVYCLLLRLRNPRKITISSIQRREMNLD 1677

Query: 69   IMLIQKNLSLAELIKRGVLIIEP 1
            IMLIQKNL+L EL+KRG+LIIEP
Sbjct: 1678 IMLIQKNLTLTELMKRGILIIEP 1700


>gb|AFI72624.1| Ycf1, partial [Gmelina arborea]
          Length = 1526

 Score =  144 bits (364), Expect = 9e-33
 Identities = 70/83 (84%), Positives = 80/83 (96%)
 Frame = -3

Query: 249  NTGAELDFFLKRYLLFQLRWGDALNQRMMNNIKIYCLLLRLINPRKITISSIQRREMSLD 70
            NT AELDFFLKRYLLFQLRW + LNQRM+NNIK+YCLLLRLI+PRKITISSIQ+REMSLD
Sbjct: 1271 NTEAELDFFLKRYLLFQLRWDETLNQRMINNIKVYCLLLRLIDPRKITISSIQKREMSLD 1330

Query: 69   IMLIQKNLSLAELIKRGVLIIEP 1
            IMLIQKNL+L+EL+K+GVLI+EP
Sbjct: 1331 IMLIQKNLTLSELMKKGVLIVEP 1353


>gb|ADD30905.1| putative RF1 protein [Ehretia acuminata]
          Length = 1814

 Score =  144 bits (364), Expect = 9e-33
 Identities = 71/83 (85%), Positives = 79/83 (95%)
 Frame = -3

Query: 249  NTGAELDFFLKRYLLFQLRWGDALNQRMMNNIKIYCLLLRLINPRKITISSIQRREMSLD 70
            NT AELD FLKRYLLFQLRW D+LNQRM+NNIK+YCLLLRLINPRKITISSIQRRE+SLD
Sbjct: 1559 NTEAELDIFLKRYLLFQLRWDDSLNQRMINNIKVYCLLLRLINPRKITISSIQRREISLD 1618

Query: 69   IMLIQKNLSLAELIKRGVLIIEP 1
            IMLI+KNL+L EL+K+GVLIIEP
Sbjct: 1619 IMLIEKNLTLTELMKKGVLIIEP 1641


>ref|YP_007353973.1| Ycf1 protein (chloroplast) [Tectona grandis]
            gi|438687662|emb|CCP47191.1| YCF1 protein (chloroplast)
            [Tectona grandis] gi|438688346|emb|CCP47280.1| YCF1
            protein (chloroplast) [Tectona grandis]
            gi|438688470|emb|CCP47369.1| YCF1 protein (chloroplast)
            [Tectona grandis]
          Length = 1898

 Score =  144 bits (363), Expect = 1e-32
 Identities = 70/83 (84%), Positives = 80/83 (96%)
 Frame = -3

Query: 249  NTGAELDFFLKRYLLFQLRWGDALNQRMMNNIKIYCLLLRLINPRKITISSIQRREMSLD 70
            NT AELDFFLKRYLLFQLRW + LNQRM+NNIK+YCLLLRLI+PRKITISSIQ+REMSLD
Sbjct: 1642 NTEAELDFFLKRYLLFQLRWDETLNQRMINNIKVYCLLLRLIDPRKITISSIQKREMSLD 1701

Query: 69   IMLIQKNLSLAELIKRGVLIIEP 1
            IMLIQKNL+L+EL+K+GVLI+EP
Sbjct: 1702 IMLIQKNLTLSELMKKGVLILEP 1724


>gb|AFI72654.1| Ycf1, partial [Thymus serpyllum]
          Length = 1527

 Score =  144 bits (363), Expect = 1e-32
 Identities = 70/83 (84%), Positives = 79/83 (95%)
 Frame = -3

Query: 249  NTGAELDFFLKRYLLFQLRWGDALNQRMMNNIKIYCLLLRLINPRKITISSIQRREMSLD 70
            NT AELDFFLKRYLLFQLRWG  LNQRM+NN K+YCLLLRLI+PRKITISSIQ+REMSLD
Sbjct: 1272 NTEAELDFFLKRYLLFQLRWGATLNQRMINNTKVYCLLLRLIDPRKITISSIQKREMSLD 1331

Query: 69   IMLIQKNLSLAELIKRGVLIIEP 1
            IMLIQKNL+++ELIK+GVLI+EP
Sbjct: 1332 IMLIQKNLTISELIKKGVLIVEP 1354


>gb|AFI72653.1| Ycf1, partial [Thymus pulegioides]
          Length = 1527

 Score =  144 bits (363), Expect = 1e-32
 Identities = 70/83 (84%), Positives = 79/83 (95%)
 Frame = -3

Query: 249  NTGAELDFFLKRYLLFQLRWGDALNQRMMNNIKIYCLLLRLINPRKITISSIQRREMSLD 70
            NT AELDFFLKRYLLFQLRWG  LNQRM+NN K+YCLLLRLI+PRKITISSIQ+REMSLD
Sbjct: 1272 NTEAELDFFLKRYLLFQLRWGATLNQRMINNTKVYCLLLRLIDPRKITISSIQKREMSLD 1331

Query: 69   IMLIQKNLSLAELIKRGVLIIEP 1
            IMLIQKNL+++ELIK+GVLI+EP
Sbjct: 1332 IMLIQKNLTISELIKKGVLIVEP 1354


>gb|AFI72647.1| Ycf1, partial [Pseudocarpidium wrightii]
          Length = 1544

 Score =  144 bits (363), Expect = 1e-32
 Identities = 70/83 (84%), Positives = 80/83 (96%)
 Frame = -3

Query: 249  NTGAELDFFLKRYLLFQLRWGDALNQRMMNNIKIYCLLLRLINPRKITISSIQRREMSLD 70
            NT AELDFFLKRYLLFQLRW + LNQRM+NNIK+YCLLLRLI+PRKITISSIQ+REMSLD
Sbjct: 1289 NTEAELDFFLKRYLLFQLRWDETLNQRMINNIKVYCLLLRLIDPRKITISSIQKREMSLD 1348

Query: 69   IMLIQKNLSLAELIKRGVLIIEP 1
            IMLIQKNL+L+EL+K+GVLI+EP
Sbjct: 1349 IMLIQKNLTLSELMKKGVLILEP 1371


>gb|ADD30903.1| putative RF1 protein [Aucuba japonica]
          Length = 1890

 Score =  144 bits (363), Expect = 1e-32
 Identities = 72/83 (86%), Positives = 78/83 (93%)
 Frame = -3

Query: 249  NTGAELDFFLKRYLLFQLRWGDALNQRMMNNIKIYCLLLRLINPRKITISSIQRREMSLD 70
            NT AEL  FLKRYLLFQLRW DALNQRM+NNIK+YCLLLRLINPRKITISSIQRREMSLD
Sbjct: 1636 NTEAELKSFLKRYLLFQLRWDDALNQRMINNIKVYCLLLRLINPRKITISSIQRREMSLD 1695

Query: 69   IMLIQKNLSLAELIKRGVLIIEP 1
            IML+QKNL+L EL+K+GVLIIEP
Sbjct: 1696 IMLVQKNLTLPELMKKGVLIIEP 1718


>gb|AFI72631.1| Ycf1, partial [Lindernia dubia]
          Length = 1523

 Score =  144 bits (362), Expect = 2e-32
 Identities = 71/83 (85%), Positives = 78/83 (93%)
 Frame = -3

Query: 249  NTGAELDFFLKRYLLFQLRWGDALNQRMMNNIKIYCLLLRLINPRKITISSIQRREMSLD 70
            NT AELD FLKRYLLFQLRWGD LNQRM+NNIKIYCLLLRLI+P KITISSIQ+REMSLD
Sbjct: 1271 NTEAELDLFLKRYLLFQLRWGDILNQRMINNIKIYCLLLRLIDPSKITISSIQKREMSLD 1330

Query: 69   IMLIQKNLSLAELIKRGVLIIEP 1
            IMLIQKNL+L EL+K+G+LIIEP
Sbjct: 1331 IMLIQKNLTLTELMKKGILIIEP 1353


>gb|AFI72622.1| Ycf1, partial [Dracocephalum parviflorum]
          Length = 1555

 Score =  144 bits (362), Expect = 2e-32
 Identities = 70/83 (84%), Positives = 80/83 (96%)
 Frame = -3

Query: 249  NTGAELDFFLKRYLLFQLRWGDALNQRMMNNIKIYCLLLRLINPRKITISSIQRREMSLD 70
            NT AELDFFLKRYLLFQLRWG  LNQRM++NIK+YCLLLRLI+PRKITISSIQ+REMSLD
Sbjct: 1300 NTEAELDFFLKRYLLFQLRWGATLNQRMIDNIKVYCLLLRLIDPRKITISSIQKREMSLD 1359

Query: 69   IMLIQKNLSLAELIKRGVLIIEP 1
            IMLIQKNL+L+EL+K+GVLI+EP
Sbjct: 1360 IMLIQKNLTLSELMKKGVLIVEP 1382


>gb|ADX62194.1| Ycf1, partial (chloroplast) [Horminum pyrenaicum]
          Length = 1519

 Score =  144 bits (362), Expect = 2e-32
 Identities = 70/83 (84%), Positives = 79/83 (95%)
 Frame = -3

Query: 249  NTGAELDFFLKRYLLFQLRWGDALNQRMMNNIKIYCLLLRLINPRKITISSIQRREMSLD 70
            NT AELDFFLKRYLLFQLRW   LNQRM+NNIK+YCLLLRLI+PRKITISSIQ+REMSLD
Sbjct: 1264 NTEAELDFFLKRYLLFQLRWDATLNQRMINNIKVYCLLLRLIDPRKITISSIQKREMSLD 1323

Query: 69   IMLIQKNLSLAELIKRGVLIIEP 1
            IMLIQKNL+L+EL+K+GVLI+EP
Sbjct: 1324 IMLIQKNLTLSELVKKGVLIVEP 1346


>gb|AFI72615.1| Ycf1, partial [Congea griffithiana]
          Length = 1516

 Score =  143 bits (361), Expect = 2e-32
 Identities = 69/83 (83%), Positives = 80/83 (96%)
 Frame = -3

Query: 249  NTGAELDFFLKRYLLFQLRWGDALNQRMMNNIKIYCLLLRLINPRKITISSIQRREMSLD 70
            NT AELDFFLKRYLLFQLRW + LNQRM+NNIK+YCLLLRLI+PRKITISS+Q+REMSLD
Sbjct: 1280 NTEAELDFFLKRYLLFQLRWDETLNQRMINNIKVYCLLLRLIDPRKITISSLQKREMSLD 1339

Query: 69   IMLIQKNLSLAELIKRGVLIIEP 1
            IMLIQKNL+L+EL+K+GVLI+EP
Sbjct: 1340 IMLIQKNLTLSELMKKGVLILEP 1362