BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus22_contig00038451
         (232 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006360029.1| PREDICTED: pentatricopeptide repeat-containi...    85   1e-14
ref|XP_004248491.1| PREDICTED: pentatricopeptide repeat-containi...    80   2e-13
ref|XP_002298921.2| hypothetical protein POPTR_0001s38850g [Popu...    76   5e-12
ref|XP_004301959.1| PREDICTED: pentatricopeptide repeat-containi...    75   1e-11
ref|XP_002521673.1| pentatricopeptide repeat-containing protein,...    74   3e-11
ref|XP_004146072.1| PREDICTED: pentatricopeptide repeat-containi...    72   1e-10
gb|EOY13642.1| Pentatricopeptide repeat (PPR) superfamily protei...    69   7e-10
gb|EXC11739.1| hypothetical protein L484_020794 [Morus notabilis]      67   3e-09
ref|XP_006477941.1| PREDICTED: pentatricopeptide repeat-containi...    65   9e-09
ref|XP_006442285.1| hypothetical protein CICLE_v10020422mg [Citr...    64   2e-08
ref|XP_006299283.1| hypothetical protein CARUB_v10015437mg [Caps...    61   1e-07
gb|ESW29109.1| hypothetical protein PHAVU_002G044000g [Phaseolus...    60   4e-07
ref|XP_006407066.1| hypothetical protein EUTSA_v10020856mg [Eutr...    59   9e-07
ref|XP_006849944.1| hypothetical protein AMTR_s00022p00130870 [A...    59   9e-07
gb|EPS67170.1| hypothetical protein M569_07606 [Genlisea aurea]        59   9e-07
ref|XP_002882884.1| predicted protein [Arabidopsis lyrata subsp....    58   1e-06
emb|CAN60667.1| hypothetical protein VITISV_028261 [Vitis vinifera]    57   2e-06
ref|NP_188076.1| pentatricopeptide repeat-containing protein [Ar...    57   3e-06
ref|XP_002447107.1| hypothetical protein SORBIDRAFT_06g028710 [S...    57   3e-06
ref|XP_002267684.1| PREDICTED: pentatricopeptide repeat-containi...    57   3e-06

>ref|XP_006360029.1| PREDICTED: pentatricopeptide repeat-containing protein At3g14580,
           mitochondrial-like [Solanum tuberosum]
          Length = 387

 Score = 84.7 bits (208), Expect = 1e-14
 Identities = 36/65 (55%), Positives = 46/65 (70%)
 Frame = -3

Query: 230 SFESYKLIIPGFCDKKLASDLDWVLRQMMRQGFVPKMGMWKLILSSILSDSNAYNCFSYQ 51
           SFESYK+I+ G CD KL  DLDWVL+QMMR GFVP+MGMW+ IL  +  D      ++Y 
Sbjct: 323 SFESYKVIVHGLCDGKLVGDLDWVLKQMMRHGFVPRMGMWRKILGCLFPDGGCCTTYTYD 382

Query: 50  EIIGN 36
           EI+ +
Sbjct: 383 EILAD 387


>ref|XP_004248491.1| PREDICTED: pentatricopeptide repeat-containing protein At3g14580,
           mitochondrial-like [Solanum lycopersicum]
          Length = 387

 Score = 80.5 bits (197), Expect = 2e-13
 Identities = 35/65 (53%), Positives = 45/65 (69%)
 Frame = -3

Query: 230 SFESYKLIIPGFCDKKLASDLDWVLRQMMRQGFVPKMGMWKLILSSILSDSNAYNCFSYQ 51
           SFESYK+I+ G CD KL  DLDWVL+QM+R GFVP+MGMWK IL  +  D       ++ 
Sbjct: 323 SFESYKVIVHGLCDGKLVGDLDWVLKQMVRHGFVPRMGMWKKILGCLFPDGGCCTTCTHN 382

Query: 50  EIIGN 36
           EI+ +
Sbjct: 383 EILAD 387


>ref|XP_002298921.2| hypothetical protein POPTR_0001s38850g [Populus trichocarpa]
           gi|550349209|gb|EEE83726.2| hypothetical protein
           POPTR_0001s38850g [Populus trichocarpa]
          Length = 292

 Score = 75.9 bits (185), Expect = 5e-12
 Identities = 34/63 (53%), Positives = 46/63 (73%)
 Frame = -3

Query: 230 SFESYKLIIPGFCDKKLASDLDWVLRQMMRQGFVPKMGMWKLILSSILSDSNAYNCFSYQ 51
           SF SYK ++ G C ++L  DLDWVL+QM RQGFVPKMGMW  ++ S++S S ++N  S  
Sbjct: 225 SFVSYKKLVHGLCKERLLRDLDWVLKQMARQGFVPKMGMWVQMVQSVVSVSYSFNHVSLS 284

Query: 50  EII 42
           EI+
Sbjct: 285 EIV 287


>ref|XP_004301959.1| PREDICTED: pentatricopeptide repeat-containing protein At3g14580,
           mitochondrial-like [Fragaria vesca subsp. vesca]
          Length = 399

 Score = 74.7 bits (182), Expect = 1e-11
 Identities = 35/64 (54%), Positives = 45/64 (70%), Gaps = 1/64 (1%)
 Frame = -3

Query: 230 SFESYKLIIPGFCDKKLASDLDWVLRQMMRQGFVPKMGMWKLILSSILSD-SNAYNCFSY 54
           SF SYK +I G C +    +LDWVLRQM RQGFVPKMGMW+ I+ S+  + SN ++C S 
Sbjct: 331 SFVSYKQLIQGLCKENKVEELDWVLRQMTRQGFVPKMGMWRQIIRSVFPEKSNNHHCVSC 390

Query: 53  QEII 42
           +E I
Sbjct: 391 EETI 394


>ref|XP_002521673.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223539064|gb|EEF40660.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 341

 Score = 73.6 bits (179), Expect = 3e-11
 Identities = 33/64 (51%), Positives = 46/64 (71%)
 Frame = -3

Query: 230 SFESYKLIIPGFCDKKLASDLDWVLRQMMRQGFVPKMGMWKLILSSILSDSNAYNCFSYQ 51
           SF SYK +I G C +KL  ++D VL+QM++QGFVPKMGMWK I+ S+LS+S       + 
Sbjct: 277 SFVSYKKLIDGLCKEKLIGEVDCVLKQMLKQGFVPKMGMWKHIVGSMLSESGDCTSICFS 336

Query: 50  EIIG 39
           ++IG
Sbjct: 337 QVIG 340


>ref|XP_004146072.1| PREDICTED: pentatricopeptide repeat-containing protein At3g14580,
           mitochondrial-like [Cucumis sativus]
           gi|449503658|ref|XP_004162112.1| PREDICTED:
           pentatricopeptide repeat-containing protein At3g14580,
           mitochondrial-like [Cucumis sativus]
          Length = 411

 Score = 71.6 bits (174), Expect = 1e-10
 Identities = 31/49 (63%), Positives = 39/49 (79%)
 Frame = -3

Query: 230 SFESYKLIIPGFCDKKLASDLDWVLRQMMRQGFVPKMGMWKLILSSILS 84
           SF SYK ++ G C KKL  D+DWVL+QM+ QGFVPK+GMWK+IL  +LS
Sbjct: 337 SFVSYKKLLSGLCKKKLTEDVDWVLKQMVMQGFVPKVGMWKVILRCMLS 385


>gb|EOY13642.1| Pentatricopeptide repeat (PPR) superfamily protein, putative
           [Theobroma cacao]
          Length = 408

 Score = 68.9 bits (167), Expect = 7e-10
 Identities = 29/65 (44%), Positives = 43/65 (66%)
 Frame = -3

Query: 230 SFESYKLIIPGFCDKKLASDLDWVLRQMMRQGFVPKMGMWKLILSSILSDSNAYNCFSYQ 51
           SF+SYK +I GFC +KL  ++DW L+QM++QGFVPKMGMW  ++  +   SN  +     
Sbjct: 344 SFDSYKKLIHGFCKEKLVREVDWALKQMVQQGFVPKMGMWTQMVKCVFHGSNTRDSLLLP 403

Query: 50  EIIGN 36
            I+ +
Sbjct: 404 AIVNS 408


>gb|EXC11739.1| hypothetical protein L484_020794 [Morus notabilis]
          Length = 405

 Score = 66.6 bits (161), Expect = 3e-09
 Identities = 29/61 (47%), Positives = 39/61 (63%)
 Frame = -3

Query: 230 SFESYKLIIPGFCDKKLASDLDWVLRQMMRQGFVPKMGMWKLILSSILSDSNAYNCFSYQ 51
           S +S+K +I G C++    D+DW L+QM +QGFVPKM MWK IL S+     +  C SY 
Sbjct: 340 SIKSFKCLIHGLCEENRMEDIDWALKQMGKQGFVPKMWMWKEILQSLFGGKTSDKCVSYF 399

Query: 50  E 48
           E
Sbjct: 400 E 400


>ref|XP_006477941.1| PREDICTED: pentatricopeptide repeat-containing protein At3g14580,
           mitochondrial-like [Citrus sinensis]
          Length = 404

 Score = 65.1 bits (157), Expect = 9e-09
 Identities = 26/47 (55%), Positives = 38/47 (80%)
 Frame = -3

Query: 230 SFESYKLIIPGFCDKKLASDLDWVLRQMMRQGFVPKMGMWKLILSSI 90
           SF SYK +I G C++KL  D+DWVL++M++QGFVP+MGMW+ I+  +
Sbjct: 337 SFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMWREIVGCV 383


>ref|XP_006442285.1| hypothetical protein CICLE_v10020422mg [Citrus clementina]
           gi|557544547|gb|ESR55525.1| hypothetical protein
           CICLE_v10020422mg [Citrus clementina]
          Length = 404

 Score = 64.3 bits (155), Expect = 2e-08
 Identities = 26/47 (55%), Positives = 37/47 (78%)
 Frame = -3

Query: 230 SFESYKLIIPGFCDKKLASDLDWVLRQMMRQGFVPKMGMWKLILSSI 90
           SF SYK +I G C++KL  D+DWVL+ M++QGFVP+MGMW+ I+  +
Sbjct: 337 SFVSYKKLIHGLCNQKLVEDVDWVLKTMVQQGFVPRMGMWREIVGCV 383


>ref|XP_006299283.1| hypothetical protein CARUB_v10015437mg [Capsella rubella]
           gi|482567992|gb|EOA32181.1| hypothetical protein
           CARUB_v10015437mg [Capsella rubella]
          Length = 408

 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 26/52 (50%), Positives = 37/52 (71%)
 Frame = -3

Query: 230 SFESYKLIIPGFCDKKLASDLDWVLRQMMRQGFVPKMGMWKLILSSILSDSN 75
           SF SYK ++ G C+ K  ++LDWVLRQM+  GFVPK GMW  + + ++S +N
Sbjct: 341 SFLSYKKMVLGLCETKSVAELDWVLRQMVNHGFVPKTGMWWKVGNCVISKTN 392


>gb|ESW29109.1| hypothetical protein PHAVU_002G044000g [Phaseolus vulgaris]
          Length = 391

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 23/56 (41%), Positives = 36/56 (64%)
 Frame = -3

Query: 230 SFESYKLIIPGFCDKKLASDLDWVLRQMMRQGFVPKMGMWKLILSSILSDSNAYNC 63
           SF+SYK ++ GFC++ +  +++WV+R M+R G VPKMGMW  I+   +       C
Sbjct: 323 SFDSYKGLVKGFCERGVVGEVEWVVRDMVRNGLVPKMGMWGKIVQCAIEREGRSGC 378


>ref|XP_006407066.1| hypothetical protein EUTSA_v10020856mg [Eutrema salsugineum]
           gi|557108212|gb|ESQ48519.1| hypothetical protein
           EUTSA_v10020856mg [Eutrema salsugineum]
          Length = 404

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 24/48 (50%), Positives = 33/48 (68%)
 Frame = -3

Query: 230 SFESYKLIIPGFCDKKLASDLDWVLRQMMRQGFVPKMGMWKLILSSIL 87
           SF SYK ++ G C+ K   ++DWVLRQM+  GFVPK GMW  +L  ++
Sbjct: 336 SFVSYKKMVLGLCETKSVEEMDWVLRQMVNHGFVPKTGMWWKVLRCVV 383


>ref|XP_006849944.1| hypothetical protein AMTR_s00022p00130870 [Amborella trichopoda]
           gi|548853542|gb|ERN11525.1| hypothetical protein
           AMTR_s00022p00130870 [Amborella trichopoda]
          Length = 404

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 26/47 (55%), Positives = 33/47 (70%)
 Frame = -3

Query: 230 SFESYKLIIPGFCDKKLASDLDWVLRQMMRQGFVPKMGMWKLILSSI 90
           SF SYK++I G CD  L  D+D VL QM+ QGF+P+MG W  IL S+
Sbjct: 344 SFLSYKMLIDGLCDMDLLRDVDAVLTQMINQGFIPRMGTWMRILESL 390


>gb|EPS67170.1| hypothetical protein M569_07606 [Genlisea aurea]
          Length = 393

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 26/50 (52%), Positives = 34/50 (68%)
 Frame = -3

Query: 230 SFESYKLIIPGFCDKKLASDLDWVLRQMMRQGFVPKMGMWKLILSSILSD 81
           SFESYKLII GFC +    D+ W L QM+  GFV +MGMW  ++  ++SD
Sbjct: 331 SFESYKLIIRGFCCENAVDDVVWGLNQMVSSGFVARMGMWSHMVRCVVSD 380


>ref|XP_002882884.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297328724|gb|EFH59143.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 409

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 24/52 (46%), Positives = 36/52 (69%)
 Frame = -3

Query: 230 SFESYKLIIPGFCDKKLASDLDWVLRQMMRQGFVPKMGMWKLILSSILSDSN 75
           SF SYK ++ G C+ K  +++DWVLR+M+  GFVPK GMW   +  ++S +N
Sbjct: 341 SFLSYKKMVLGLCETKSVAEMDWVLRKMVNHGFVPKTGMWWKAVCCVVSKNN 392


>emb|CAN60667.1| hypothetical protein VITISV_028261 [Vitis vinifera]
          Length = 393

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 23/47 (48%), Positives = 35/47 (74%)
 Frame = -3

Query: 230 SFESYKLIIPGFCDKKLASDLDWVLRQMMRQGFVPKMGMWKLILSSI 90
           SF SYK++I G C + L +D+ W+L+QM+ QGFVP+  MW+ IL ++
Sbjct: 331 SFVSYKMVIYGLCKENLVADVVWILKQMVEQGFVPERWMWRRILQTM 377


>ref|NP_188076.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75274210|sp|Q9LUD6.1|PP230_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At3g14580, mitochondrial; Flags: Precursor
           gi|9294380|dbj|BAB02390.1| unnamed protein product
           [Arabidopsis thaliana] gi|119935972|gb|ABM06049.1|
           At3g14580 [Arabidopsis thaliana]
           gi|332642020|gb|AEE75541.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 405

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 24/52 (46%), Positives = 35/52 (67%)
 Frame = -3

Query: 230 SFESYKLIIPGFCDKKLASDLDWVLRQMMRQGFVPKMGMWKLILSSILSDSN 75
           SF SYK ++ G C+ K   ++DWVLRQM+  GFVPK  MW  ++  ++S +N
Sbjct: 341 SFLSYKKMVLGLCETKSVVEMDWVLRQMVNHGFVPKTLMWWKVVQCVVSKNN 392


>ref|XP_002447107.1| hypothetical protein SORBIDRAFT_06g028710 [Sorghum bicolor]
           gi|241938290|gb|EES11435.1| hypothetical protein
           SORBIDRAFT_06g028710 [Sorghum bicolor]
          Length = 363

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 25/47 (53%), Positives = 33/47 (70%)
 Frame = -3

Query: 230 SFESYKLIIPGFCDKKLASDLDWVLRQMMRQGFVPKMGMWKLILSSI 90
           SF+SYKL+I G C +    D   VL+QM+ QGFVP+MG W  +L+SI
Sbjct: 316 SFQSYKLLIDGLCSEDCVDDAHLVLKQMVGQGFVPRMGTWTKLLTSI 362


>ref|XP_002267684.1| PREDICTED: pentatricopeptide repeat-containing protein At3g14580,
           mitochondrial-like [Vitis vinifera]
          Length = 393

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 23/47 (48%), Positives = 35/47 (74%)
 Frame = -3

Query: 230 SFESYKLIIPGFCDKKLASDLDWVLRQMMRQGFVPKMGMWKLILSSI 90
           SF SYK++I G C + L +D+ W+L+QM+ QGFVP+  MW+ IL ++
Sbjct: 331 SFVSYKMMIYGLCKENLVADVVWILKQMVEQGFVPERWMWRRILQTM 377