BLASTX nr result
ID: Catharanthus22_contig00038435
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus22_contig00038435
(311 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EOY30687.1| Tetratricopeptide repeat-like superfamily protein... 112 4e-23
gb|EMJ05447.1| hypothetical protein PRUPE_ppa002250mg [Prunus pe... 112 7e-23
ref|XP_006451257.1| hypothetical protein CICLE_v10010361mg [Citr... 111 1e-22
ref|XP_002325018.2| hypothetical protein POPTR_0018s09280g [Popu... 111 1e-22
ref|XP_003528632.1| PREDICTED: pentatricopeptide repeat-containi... 110 3e-22
ref|XP_004167293.1| PREDICTED: LOW QUALITY PROTEIN: putative pen... 105 5e-21
ref|XP_004147314.1| PREDICTED: putative pentatricopeptide repeat... 105 5e-21
ref|XP_002280538.2| PREDICTED: pentatricopeptide repeat-containi... 105 8e-21
emb|CAN76870.1| hypothetical protein VITISV_012312 [Vitis vinifera] 105 8e-21
gb|ESW18668.1| hypothetical protein PHAVU_006G0599000g [Phaseolu... 103 2e-20
gb|ESW18512.1| hypothetical protein PHAVU_006G0477001g, partial ... 103 2e-20
ref|XP_004504106.1| PREDICTED: pentatricopeptide repeat-containi... 102 7e-20
gb|AAU90328.2| Pentatricopeptide repeat domain containing protei... 89 5e-16
ref|XP_006281476.1| hypothetical protein CARUB_v10027560mg [Caps... 89 8e-16
ref|NP_172412.1| pentatricopeptide repeat-containing protein [Ar... 88 1e-15
ref|XP_006353946.1| PREDICTED: putative pentatricopeptide repeat... 87 2e-15
ref|XP_004235394.1| PREDICTED: putative pentatricopeptide repeat... 87 2e-15
ref|NP_680717.2| pentatricopeptide repeat-containing protein [Ar... 87 2e-15
gb|ACE80796.1| pentatricopeptide repeat protein [Isoetes engelma... 87 2e-15
ref|XP_006477110.1| PREDICTED: pentatricopeptide repeat-containi... 86 4e-15
>gb|EOY30687.1| Tetratricopeptide repeat-like superfamily protein [Theobroma cacao]
Length = 697
Score = 112 bits (281), Expect = 4e-23
Identities = 55/103 (53%), Positives = 67/103 (65%)
Frame = +3
Query: 3 GRWEDVAKMRSLMKSSQVIKFSAYSWTEVGGKVHKFTADGKSHPXXXXXXXXXXXXXXXX 182
GRWEDVA +RSLMK V KF+AYSW E+ +VHKF ++ +SHP
Sbjct: 541 GRWEDVASVRSLMKIKNVKKFAAYSWIEIDNEVHKFVSEDRSHPETEIIYEELSRLIKKL 600
Query: 183 XXAGYSPDTKLALNNVGEDEKIQSICYHSEKLALAFVLYRMPR 311
AG+ PDTKL L+NV E+EK SICYHSEKLALAF L + P+
Sbjct: 601 KEAGFMPDTKLVLHNVVEEEKFASICYHSEKLALAFGLIKKPQ 643
>gb|EMJ05447.1| hypothetical protein PRUPE_ppa002250mg [Prunus persica]
Length = 695
Score = 112 bits (279), Expect = 7e-23
Identities = 53/102 (51%), Positives = 68/102 (66%)
Frame = +3
Query: 3 GRWEDVAKMRSLMKSSQVIKFSAYSWTEVGGKVHKFTADGKSHPXXXXXXXXXXXXXXXX 182
GRW+DVA MRSLMK V KF+AYSW E+ +VHKF ++ ++HP
Sbjct: 539 GRWKDVACMRSLMKDRNVKKFAAYSWIEIDNEVHKFASEDRTHPEAKEIYEELNTLIRKL 598
Query: 183 XXAGYSPDTKLALNNVGEDEKIQSICYHSEKLALAFVLYRMP 308
G++PDTKL L++VGE+EK +SICYHSEKLALAF L + P
Sbjct: 599 QETGFTPDTKLVLHDVGEEEKFESICYHSEKLALAFGLTKKP 640
>ref|XP_006451257.1| hypothetical protein CICLE_v10010361mg [Citrus clementina]
gi|568883054|ref|XP_006494315.1| PREDICTED: putative
pentatricopeptide repeat-containing protein
At5g09950-like [Citrus sinensis]
gi|557554483|gb|ESR64497.1| hypothetical protein
CICLE_v10010361mg [Citrus clementina]
Length = 696
Score = 111 bits (277), Expect = 1e-22
Identities = 52/102 (50%), Positives = 68/102 (66%)
Frame = +3
Query: 3 GRWEDVAKMRSLMKSSQVIKFSAYSWTEVGGKVHKFTADGKSHPXXXXXXXXXXXXXXXX 182
GRWEDVA +RS MKS V KF+AYSW E+ KVHKF ++ ++HP
Sbjct: 540 GRWEDVASIRSSMKSKNVKKFAAYSWIEIDNKVHKFVSEDRTHPETEIIYEELSKLIKKL 599
Query: 183 XXAGYSPDTKLALNNVGEDEKIQSICYHSEKLALAFVLYRMP 308
AG+SP+TKL L++ E+EK++SICYHSEKLALA+ L + P
Sbjct: 600 QEAGFSPNTKLVLHDTQEEEKVKSICYHSEKLALAYCLIKKP 641
>ref|XP_002325018.2| hypothetical protein POPTR_0018s09280g [Populus trichocarpa]
gi|550318380|gb|EEF03583.2| hypothetical protein
POPTR_0018s09280g [Populus trichocarpa]
Length = 695
Score = 111 bits (277), Expect = 1e-22
Identities = 54/102 (52%), Positives = 68/102 (66%)
Frame = +3
Query: 3 GRWEDVAKMRSLMKSSQVIKFSAYSWTEVGGKVHKFTADGKSHPXXXXXXXXXXXXXXXX 182
GRW+DVA +RSLMKS V KFSAYSW E+ +VHKF AD ++HP
Sbjct: 539 GRWKDVASIRSLMKSKHVKKFSAYSWIEIDNEVHKFVADDRTHPDAKIIHVQLNRLIRKL 598
Query: 183 XXAGYSPDTKLALNNVGEDEKIQSICYHSEKLALAFVLYRMP 308
AG+SP+T L L++ GEDEK++SI YHSEKLALA+ L + P
Sbjct: 599 QEAGFSPNTNLVLHDFGEDEKLESINYHSEKLALAYGLIKKP 640
>ref|XP_003528632.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like isoform X1 [Glycine max]
gi|571467711|ref|XP_006584018.1| PREDICTED:
pentatricopeptide repeat-containing protein
At2g22070-like isoform X2 [Glycine max]
gi|571467713|ref|XP_006584019.1| PREDICTED:
pentatricopeptide repeat-containing protein
At2g22070-like isoform X3 [Glycine max]
Length = 693
Score = 110 bits (274), Expect = 3e-22
Identities = 53/102 (51%), Positives = 64/102 (62%)
Frame = +3
Query: 3 GRWEDVAKMRSLMKSSQVIKFSAYSWTEVGGKVHKFTADGKSHPXXXXXXXXXXXXXXXX 182
GRW+DVA +RSLMK KF+AYSW EVG KVH+F ++ HP
Sbjct: 537 GRWKDVAVVRSLMKEKNAKKFAAYSWVEVGNKVHRFVSEDHYHPEVGKIYGELNRLISIL 596
Query: 183 XXAGYSPDTKLALNNVGEDEKIQSICYHSEKLALAFVLYRMP 308
GY+PDT + L+NVGE+EK +SI YHSEKLALAF L R P
Sbjct: 597 QQIGYNPDTNIVLHNVGEEEKFRSISYHSEKLALAFALIRKP 638
>ref|XP_004167293.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At1g68930-like [Cucumis
sativus]
Length = 695
Score = 105 bits (263), Expect = 5e-21
Identities = 48/102 (47%), Positives = 68/102 (66%)
Frame = +3
Query: 3 GRWEDVAKMRSLMKSSQVIKFSAYSWTEVGGKVHKFTADGKSHPXXXXXXXXXXXXXXXX 182
GRW+DVA +R+LMKS V KF+ +SW E+ +VH+FT++ ++HP
Sbjct: 539 GRWKDVASVRNLMKSKNVKKFAGFSWIEIDNEVHRFTSEDRTHPESEDIYEKLNMLIGKL 598
Query: 183 XXAGYSPDTKLALNNVGEDEKIQSICYHSEKLALAFVLYRMP 308
G++P+T L L++VGEDEK +SIC+HSEKLALAF L + P
Sbjct: 599 QEEGFTPNTNLVLHDVGEDEKFKSICFHSEKLALAFGLIKKP 640
>ref|XP_004147314.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930-like [Cucumis sativus]
Length = 695
Score = 105 bits (263), Expect = 5e-21
Identities = 48/102 (47%), Positives = 68/102 (66%)
Frame = +3
Query: 3 GRWEDVAKMRSLMKSSQVIKFSAYSWTEVGGKVHKFTADGKSHPXXXXXXXXXXXXXXXX 182
GRW+DVA +R+LMKS V KF+ +SW E+ +VH+FT++ ++HP
Sbjct: 539 GRWKDVASVRNLMKSKNVKKFAGFSWIEIDNEVHRFTSEDRTHPESEDIYEKLNMLIGKL 598
Query: 183 XXAGYSPDTKLALNNVGEDEKIQSICYHSEKLALAFVLYRMP 308
G++P+T L L++VGEDEK +SIC+HSEKLALAF L + P
Sbjct: 599 QEEGFTPNTNLVLHDVGEDEKFKSICFHSEKLALAFGLIKKP 640
>ref|XP_002280538.2| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Vitis vinifera]
gi|297738773|emb|CBI28018.3| unnamed protein product
[Vitis vinifera]
Length = 695
Score = 105 bits (261), Expect = 8e-21
Identities = 49/102 (48%), Positives = 68/102 (66%)
Frame = +3
Query: 3 GRWEDVAKMRSLMKSSQVIKFSAYSWTEVGGKVHKFTADGKSHPXXXXXXXXXXXXXXXX 182
GRW+DVA +RSLMK++++ KF+AYSW E+ +VHKF A+ ++H
Sbjct: 539 GRWKDVAAVRSLMKNNKIKKFAAYSWIEIDNQVHKFVAEDRTHSETEQIYEELNRLIKKL 598
Query: 183 XXAGYSPDTKLALNNVGEDEKIQSICYHSEKLALAFVLYRMP 308
+G++PDT L L++V E+EK SICYHSEKLALAF L + P
Sbjct: 599 QESGFTPDTNLVLHDVVEEEKFDSICYHSEKLALAFWLIKKP 640
>emb|CAN76870.1| hypothetical protein VITISV_012312 [Vitis vinifera]
Length = 420
Score = 105 bits (261), Expect = 8e-21
Identities = 49/102 (48%), Positives = 68/102 (66%)
Frame = +3
Query: 3 GRWEDVAKMRSLMKSSQVIKFSAYSWTEVGGKVHKFTADGKSHPXXXXXXXXXXXXXXXX 182
GRW+DVA +RSLMK++++ KF+AYSW E+ +VHKF A+ ++H
Sbjct: 227 GRWKDVAAVRSLMKNNKIKKFAAYSWIEIDSQVHKFVAEDRTHSETEQIYDKLNRLIKKL 286
Query: 183 XXAGYSPDTKLALNNVGEDEKIQSICYHSEKLALAFVLYRMP 308
+G++PDT L L++V E+EK SICYHSEKLALAF L + P
Sbjct: 287 QESGFTPDTNLVLHDVVEEEKFDSICYHSEKLALAFWLIKKP 328
>gb|ESW18668.1| hypothetical protein PHAVU_006G0599000g [Phaseolus vulgaris]
Length = 592
Score = 103 bits (258), Expect = 2e-20
Identities = 51/102 (50%), Positives = 63/102 (61%)
Frame = +3
Query: 3 GRWEDVAKMRSLMKSSQVIKFSAYSWTEVGGKVHKFTADGKSHPXXXXXXXXXXXXXXXX 182
GRW+DVA +RSLMK KF+AYSW EVG +VH+F ++ SH
Sbjct: 436 GRWKDVAVVRSLMKEKSAKKFAAYSWVEVGNEVHRFVSEDHSHLEAGKIYGELNRLISIL 495
Query: 183 XXAGYSPDTKLALNNVGEDEKIQSICYHSEKLALAFVLYRMP 308
GY+PD + L+NVGE+EK +SI YHSEKLALAF L R P
Sbjct: 496 QNIGYNPDINIVLHNVGEEEKFRSISYHSEKLALAFSLIRKP 537
>gb|ESW18512.1| hypothetical protein PHAVU_006G0477001g, partial [Phaseolus
vulgaris]
Length = 477
Score = 103 bits (257), Expect = 2e-20
Identities = 51/102 (50%), Positives = 62/102 (60%)
Frame = +3
Query: 3 GRWEDVAKMRSLMKSSQVIKFSAYSWTEVGGKVHKFTADGKSHPXXXXXXXXXXXXXXXX 182
GRW+DVA +RSLMK KF+AYSW EVG +VH+F ++ SH
Sbjct: 321 GRWKDVAVVRSLMKEKSAKKFAAYSWVEVGNEVHRFVSEDHSHLEAGKIYGELNRLISIL 380
Query: 183 XXAGYSPDTKLALNNVGEDEKIQSICYHSEKLALAFVLYRMP 308
GY+PD + L+NVGE EK +SI YHSEKLALAF L R P
Sbjct: 381 QNIGYNPDINIVLHNVGEKEKFRSISYHSEKLALAFALIRKP 422
>ref|XP_004504106.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like isoform X1 [Cicer arietinum]
gi|502140204|ref|XP_004504107.1| PREDICTED:
pentatricopeptide repeat-containing protein
At4g02750-like isoform X2 [Cicer arietinum]
Length = 699
Score = 102 bits (253), Expect = 7e-20
Identities = 49/102 (48%), Positives = 65/102 (63%)
Frame = +3
Query: 3 GRWEDVAKMRSLMKSSQVIKFSAYSWTEVGGKVHKFTADGKSHPXXXXXXXXXXXXXXXX 182
GRW+DVA +RS+MK+ V KF+AYSW EVG +VH+F + +HP
Sbjct: 543 GRWKDVAVVRSVMKNKNVKKFAAYSWVEVGNEVHRFVSGDHNHPETERIFGQLNRLISTL 602
Query: 183 XXAGYSPDTKLALNNVGEDEKIQSICYHSEKLALAFVLYRMP 308
GY+PDT + L+NV E+EK +SI +HSEKLALAF L + P
Sbjct: 603 QQIGYNPDTSIVLHNVVEEEKFRSISHHSEKLALAFSLIKKP 644
>gb|AAU90328.2| Pentatricopeptide repeat domain containing protein, putative
[Solanum demissum]
Length = 819
Score = 89.4 bits (220), Expect = 5e-16
Identities = 42/102 (41%), Positives = 58/102 (56%)
Frame = +3
Query: 3 GRWEDVAKMRSLMKSSQVIKFSAYSWTEVGGKVHKFTADGKSHPXXXXXXXXXXXXXXXX 182
G+WE+ AK++ M+ V K +AYSW E+ +VH FTA+ ++HP
Sbjct: 664 GKWENAAKVKKAMRERGVKKVTAYSWVEIDHRVHVFTANDRTHPQTEQIRRKINSLVELM 723
Query: 183 XXAGYSPDTKLALNNVGEDEKIQSICYHSEKLALAFVLYRMP 308
GY PDT L NV E+ KI+S+ YHSE+LA+AF L P
Sbjct: 724 DKEGYKPDTSCTLQNVDEEMKIESLKYHSERLAIAFALINTP 765
>ref|XP_006281476.1| hypothetical protein CARUB_v10027560mg [Capsella rubella]
gi|482550180|gb|EOA14374.1| hypothetical protein
CARUB_v10027560mg [Capsella rubella]
Length = 943
Score = 88.6 bits (218), Expect = 8e-16
Identities = 47/103 (45%), Positives = 60/103 (58%), Gaps = 1/103 (0%)
Frame = +3
Query: 3 GRWEDVAKMRSLMKSSQVIKFSAYSWTEVGGKVHKFTADGKSHP-XXXXXXXXXXXXXXX 179
GRW+DV ++R MK+S++ K SW E+ GKVHKFTA KSHP
Sbjct: 787 GRWDDVERVREKMKASRLEKHPGCSWIEIDGKVHKFTARDKSHPETKEIYEKLSEVTRKL 846
Query: 180 XXXAGYSPDTKLALNNVGEDEKIQSICYHSEKLALAFVLYRMP 308
AGY DTK L+NV E EK+Q + HSE+LA+A+ L R P
Sbjct: 847 EEEAGYQADTKFVLHNVDEREKVQMLQGHSERLAIAYGLLRTP 889
>ref|NP_172412.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806401|sp|Q56XI1.2|PPR25_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At1g09410 gi|3482916|gb|AAC33201.1| Hypothetical protein
[Arabidopsis thaliana] gi|91805759|gb|ABE65608.1|
pentatricopeptide repeat-containing protein [Arabidopsis
thaliana] gi|332190317|gb|AEE28438.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 705
Score = 88.2 bits (217), Expect = 1e-15
Identities = 46/102 (45%), Positives = 60/102 (58%), Gaps = 1/102 (0%)
Frame = +3
Query: 3 GRWEDVAKMRSLMKSSQVIKFSAYSWTEVGGKVHKFTADG-KSHPXXXXXXXXXXXXXXX 179
GRW DVA++R LMK+ V K SWTEV KVH FT G SHP
Sbjct: 549 GRWADVAELRKLMKTRLVRKSPGCSWTEVENKVHAFTRGGINSHPEQESILKILDELDGL 608
Query: 180 XXXAGYSPDTKLALNNVGEDEKIQSICYHSEKLALAFVLYRM 305
AGY+PD AL++V E+EK+ S+ YHSE+LA+A+ L ++
Sbjct: 609 LREAGYNPDCSYALHDVDEEEKVNSLKYHSERLAVAYALLKL 650
>ref|XP_006353946.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g01510-like [Solanum tuberosum]
Length = 819
Score = 87.4 bits (215), Expect = 2e-15
Identities = 42/102 (41%), Positives = 57/102 (55%)
Frame = +3
Query: 3 GRWEDVAKMRSLMKSSQVIKFSAYSWTEVGGKVHKFTADGKSHPXXXXXXXXXXXXXXXX 182
G+WE+ AK++ M+ V K +AYSW E+ VH FTA+ ++HP
Sbjct: 664 GKWENAAKVKKAMRERGVKKVTAYSWVEIDHIVHVFTANDRTHPQTEQIRRKINSLVELM 723
Query: 183 XXAGYSPDTKLALNNVGEDEKIQSICYHSEKLALAFVLYRMP 308
GY PDT L NV E+ KI+S+ YHSE+LA+AF L P
Sbjct: 724 DKEGYKPDTSCTLQNVDEEMKIESLKYHSERLAIAFALINTP 765
>ref|XP_004235394.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g01510-like [Solanum lycopersicum]
Length = 819
Score = 87.4 bits (215), Expect = 2e-15
Identities = 41/102 (40%), Positives = 58/102 (56%)
Frame = +3
Query: 3 GRWEDVAKMRSLMKSSQVIKFSAYSWTEVGGKVHKFTADGKSHPXXXXXXXXXXXXXXXX 182
G+WE+ AK++ M+ V K +AYSW E+ +VH FTA+ ++HP
Sbjct: 664 GKWENAAKVKKAMRERGVKKVTAYSWVEIDHRVHVFTANDRTHPQTEQIRRKINSLVELM 723
Query: 183 XXAGYSPDTKLALNNVGEDEKIQSICYHSEKLALAFVLYRMP 308
G+ PDT L NV E+ KI+S+ YHSE+LA+AF L P
Sbjct: 724 DKEGHKPDTSCTLQNVDEEMKIESLKYHSERLAIAFALINTP 765
>ref|NP_680717.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|357529479|sp|Q9M4P3.3|PP316_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At4g16835, mitochondrial; AltName: Full=Protein DYW10;
Flags: Precursor gi|332658412|gb|AEE83812.1|
pentatricopeptide repeat-containing protein [Arabidopsis
thaliana]
Length = 656
Score = 87.0 bits (214), Expect = 2e-15
Identities = 41/102 (40%), Positives = 59/102 (57%)
Frame = +3
Query: 6 RWEDVAKMRSLMKSSQVIKFSAYSWTEVGGKVHKFTADGKSHPXXXXXXXXXXXXXXXXX 185
RWEDVA++R MK S V+K YSW E+ KVH F + + HP
Sbjct: 502 RWEDVARVRKRMKESNVVKVPGYSWIEIRNKVHHFRSSDRIHPELDSIHKKLKELEKKMK 561
Query: 186 XAGYSPDTKLALNNVGEDEKIQSICYHSEKLALAFVLYRMPR 311
AGY P+ + AL+NV E++K + + +HSEKLA+AF ++P+
Sbjct: 562 LAGYKPELEFALHNVEEEQKEKLLLWHSEKLAVAFGCIKLPQ 603
>gb|ACE80796.1| pentatricopeptide repeat protein [Isoetes engelmannii]
Length = 152
Score = 87.0 bits (214), Expect = 2e-15
Identities = 44/103 (42%), Positives = 57/103 (55%)
Frame = +3
Query: 3 GRWEDVAKMRSLMKSSQVIKFSAYSWTEVGGKVHKFTADGKSHPXXXXXXXXXXXXXXXX 182
GRWED A++R LM+ V K SW EV G VH F + SHP
Sbjct: 4 GRWEDKARVRKLMEDQGVRKEPGRSWIEVNGSVHSFVVEDVSHPKTEQIYIELQNLSEQI 63
Query: 183 XXAGYSPDTKLALNNVGEDEKIQSICYHSEKLALAFVLYRMPR 311
AGY PDT+ L+++ E+EK S+C+HSEKLA+AF L P+
Sbjct: 64 VQAGYVPDTRFVLHDLTEEEKKFSLCHHSEKLAIAFGLISTPQ 106
>ref|XP_006477110.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16835,
mitochondrial-like [Citrus sinensis]
Length = 669
Score = 86.3 bits (212), Expect = 4e-15
Identities = 42/101 (41%), Positives = 59/101 (58%)
Frame = +3
Query: 6 RWEDVAKMRSLMKSSQVIKFSAYSWTEVGGKVHKFTADGKSHPXXXXXXXXXXXXXXXXX 185
+W+DVA++R MK + V+K YSW EVG VH+F + + HP
Sbjct: 515 KWDDVARIRLSMKENNVVKMPGYSWIEVGTVVHEFRSGDRVHPELVSIHEKLKELEKRMK 574
Query: 186 XAGYSPDTKLALNNVGEDEKIQSICYHSEKLALAFVLYRMP 308
AGY PD + AL+ VGE+ K Q + +HSEKLA+AF L ++P
Sbjct: 575 LAGYVPDLEFALHAVGEEVKEQLLLFHSEKLAIAFGLIKVP 615