BLASTX nr result
ID: Catharanthus22_contig00038339
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus22_contig00038339
(486 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004250478.1| PREDICTED: pentatricopeptide repeat-containi... 142 4e-32
ref|XP_006361496.1| PREDICTED: pentatricopeptide repeat-containi... 142 6e-32
gb|EOY19053.1| Pentatricopeptide repeat-containing protein [Theo... 122 6e-26
ref|XP_006436646.1| hypothetical protein CICLE_v10030857mg [Citr... 115 6e-24
ref|XP_006855329.1| hypothetical protein AMTR_s00057p00087430 [A... 110 2e-22
ref|XP_002519063.1| pentatricopeptide repeat-containing protein,... 102 7e-20
ref|XP_006384866.1| hypothetical protein POPTR_0004s21780g [Popu... 99 4e-19
gb|EOX98930.1| Pentatricopeptide repeat (PPR) superfamily protei... 99 4e-19
ref|XP_004504725.1| PREDICTED: pentatricopeptide repeat-containi... 99 8e-19
ref|XP_004253182.1| PREDICTED: pentatricopeptide repeat-containi... 98 1e-18
gb|EXC35441.1| hypothetical protein L484_026747 [Morus notabilis] 97 2e-18
ref|XP_006580029.1| PREDICTED: pentatricopeptide repeat-containi... 97 2e-18
ref|XP_002514406.1| pentatricopeptide repeat-containing protein,... 97 2e-18
gb|EXB40433.1| hypothetical protein L484_013736 [Morus notabilis] 96 4e-18
ref|XP_004290083.1| PREDICTED: pentatricopeptide repeat-containi... 96 4e-18
ref|XP_006342434.1| PREDICTED: pentatricopeptide repeat-containi... 96 5e-18
ref|XP_002879469.1| pentatricopeptide repeat-containing protein ... 96 5e-18
gb|ESW30990.1| hypothetical protein PHAVU_002G199400g [Phaseolus... 96 6e-18
ref|XP_004488287.1| PREDICTED: pentatricopeptide repeat-containi... 95 1e-17
ref|NP_190904.1| pentatricopeptide repeat-containing protein [Ar... 95 1e-17
>ref|XP_004250478.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53360,
mitochondrial-like [Solanum lycopersicum]
Length = 702
Score = 142 bits (359), Expect = 4e-32
Identities = 72/116 (62%), Positives = 90/116 (77%), Gaps = 2/116 (1%)
Frame = +2
Query: 143 MNFSSLIRSCIDKKSIKNGKSVHAQLIVSGS-KPDVFTNNHLVTMYLKLNHLGYAQKVFD 319
M+F LIR C KS+ NGKS+HAQL+ GS K D+FTNNHL+TMYLKLN AQ++FD
Sbjct: 1 MSFIQLIRGCTSSKSLFNGKSLHAQLLKLGSLKADIFTNNHLLTMYLKLNQFDDAQQLFD 60
Query: 320 KMGKRNVISWTTLISSYMQMGLSENALNGLRSMVL-DGFNPNTYTYVAAISACTNI 484
+M +RN+ISWTTLIS+Y Q+G+ E AL RSM L DGF PN YTYVAA+SAC+++
Sbjct: 61 RMPERNIISWTTLISTYTQLGMYEKALGCFRSMNLEDGFGPNGYTYVAALSACSSL 116
Score = 81.6 bits (200), Expect = 1e-13
Identities = 38/112 (33%), Positives = 64/112 (57%)
Frame = +2
Query: 149 FSSLIRSCIDKKSIKNGKSVHAQLIVSGSKPDVFTNNHLVTMYLKLNHLGYAQKVFDKMG 328
+SS++ C D +I+ GK H +++ S +V ++ L+ MY K LGYA++VFD +
Sbjct: 409 YSSILSICGDLPAIEWGKQTHCRVLKSRLDSNVVVDSALIDMYAKCGRLGYARRVFDILP 468
Query: 329 KRNVISWTTLISSYMQMGLSENALNGLRSMVLDGFNPNTYTYVAAISACTNI 484
+N++SW T++ Y Q G + AL M G PN T++ +SAC ++
Sbjct: 469 AKNLVSWNTMVVGYAQHGFGKEALEIYGMMQSSGVKPNDITFLGVLSACGHV 520
Score = 79.0 bits (193), Expect = 6e-13
Identities = 40/116 (34%), Positives = 66/116 (56%)
Frame = +2
Query: 137 SPMNFSSLIRSCIDKKSIKNGKSVHAQLIVSGSKPDVFTNNHLVTMYLKLNHLGYAQKVF 316
S FSS+I + D K ++ GK +H +++ G F N L+ Y K + + K+F
Sbjct: 304 SERTFSSVIGAFADVKEVRVGKQIHCRIVKMGFDSFSFVCNALLDFYSKSDLFEESLKLF 363
Query: 317 DKMGKRNVISWTTLISSYMQMGLSENALNGLRSMVLDGFNPNTYTYVAAISACTNI 484
+M +++V+SW TLI+ + E AL LR M+L+GF P+ YTY + +S C ++
Sbjct: 364 QEMKEQDVVSWNTLIAGCVSSSRYEEALRFLREMLLEGFEPSLYTYSSILSICGDL 419
>ref|XP_006361496.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53360,
mitochondrial-like [Solanum tuberosum]
Length = 702
Score = 142 bits (357), Expect = 6e-32
Identities = 71/116 (61%), Positives = 91/116 (78%), Gaps = 2/116 (1%)
Frame = +2
Query: 143 MNFSSLIRSCIDKKSIKNGKSVHAQLIVSGSK-PDVFTNNHLVTMYLKLNHLGYAQKVFD 319
M+F L+R C KS+ NGKS+HAQL+ GS+ D+FTNNHL+TMYLKLN L AQ++FD
Sbjct: 1 MSFIQLLRGCTSSKSLFNGKSLHAQLLKLGSQNADIFTNNHLLTMYLKLNQLDDAQQLFD 60
Query: 320 KMGKRNVISWTTLISSYMQMGLSENALNGLRSMVLD-GFNPNTYTYVAAISACTNI 484
+M +RN+ISWTTLIS+Y Q+G+SE AL RSM L+ GF PN YTYVAA SAC+++
Sbjct: 61 RMPERNIISWTTLISTYSQLGMSEKALGCFRSMNLEYGFGPNGYTYVAAFSACSSL 116
Score = 80.5 bits (197), Expect = 2e-13
Identities = 41/116 (35%), Positives = 66/116 (56%)
Frame = +2
Query: 137 SPMNFSSLIRSCIDKKSIKNGKSVHAQLIVSGSKPDVFTNNHLVTMYLKLNHLGYAQKVF 316
S FSS+I + D K ++ GK +H++++ G F N L+ Y K + K+F
Sbjct: 304 SERTFSSVIGAFADIKELRVGKQIHSRIVKQGFDSFSFVCNALLDFYSKSELFEKSLKLF 363
Query: 317 DKMGKRNVISWTTLISSYMQMGLSENALNGLRSMVLDGFNPNTYTYVAAISACTNI 484
+M + +V+SW TLI+ + G E AL LR M+L+GF P+ YTY + +S C ++
Sbjct: 364 QEMKEHDVVSWNTLIAGCVSSGRYEEALRFLREMLLEGFEPSLYTYSSILSICGDL 419
Score = 79.0 bits (193), Expect = 6e-13
Identities = 38/112 (33%), Positives = 63/112 (56%)
Frame = +2
Query: 149 FSSLIRSCIDKKSIKNGKSVHAQLIVSGSKPDVFTNNHLVTMYLKLNHLGYAQKVFDKMG 328
+SS++ C D +I+ GK H +++ S +V ++ L+ MY K LGYA++VFD +
Sbjct: 409 YSSILSICGDLPAIEWGKQTHCRVLKSRFDSNVVVDSALIDMYAKCGRLGYARRVFDILP 468
Query: 329 KRNVISWTTLISSYMQMGLSENALNGLRSMVLDGFNPNTYTYVAAISACTNI 484
+N+ISW T++ Y Q G + AL M PN T++ +SAC ++
Sbjct: 469 AKNLISWNTMVVGYAQHGFGKEALEIYGMMQSSEVKPNDITFLGVLSACGHV 520
Score = 55.5 bits (132), Expect = 7e-06
Identities = 28/110 (25%), Positives = 53/110 (48%)
Frame = +2
Query: 155 SLIRSCIDKKSIKNGKSVHAQLIVSGSKPDVFTNNHLVTMYLKLNHLGYAQKVFDKMGKR 334
S++ +C KS++ G +H ++ S D F L+ Y K L A++ FD+ +
Sbjct: 209 SVLGACAAIKSLQLGMQIHGLIVKSSLGMDQFVVTGLINFYAKCGRLELARQAFDEADEP 268
Query: 335 NVISWTTLISSYMQMGLSENALNGLRSMVLDGFNPNTYTYVAAISACTNI 484
+ +WT +I +Q+G A+ ++ G P+ T+ + I A +I
Sbjct: 269 ELHAWTAIIGGCVQLGSGREAIELFCKLLSSGLKPSERTFSSVIGAFADI 318
>gb|EOY19053.1| Pentatricopeptide repeat-containing protein [Theobroma cacao]
Length = 671
Score = 122 bits (305), Expect = 6e-26
Identities = 59/113 (52%), Positives = 81/113 (71%)
Frame = +2
Query: 146 NFSSLIRSCIDKKSIKNGKSVHAQLIVSGSKPDVFTNNHLVTMYLKLNHLGYAQKVFDKM 325
+FS L R D +SI+NG ++HA++I S D++TNNHL+ MY+K N + A+KVFD M
Sbjct: 3 SFSRLFRLLGDTRSIRNGIALHAKIITSQISRDIYTNNHLLAMYVKFNRIVDARKVFDGM 62
Query: 326 GKRNVISWTTLISSYMQMGLSENALNGLRSMVLDGFNPNTYTYVAAISACTNI 484
+RNVISWT LIS Y QMG++E AL+ L MV D PN YT+V+A+SAC ++
Sbjct: 63 PERNVISWTALISGYSQMGMAEKALDCLSLMVSDDLEPNYYTFVSAVSACASL 115
Score = 75.5 bits (184), Expect = 7e-12
Identities = 35/116 (30%), Positives = 65/116 (56%)
Frame = +2
Query: 137 SPMNFSSLIRSCIDKKSIKNGKSVHAQLIVSGSKPDVFTNNHLVTMYLKLNHLGYAQKVF 316
S FSS++ +C D + I+ GK H+ + G ++ N ++ Y K L A + F
Sbjct: 303 SERTFSSVLGACADAEVIEVGKQFHSLIAKMGYVSFIYVGNAVLDFYSKCGLLQEALRTF 362
Query: 317 DKMGKRNVISWTTLISSYMQMGLSENALNGLRSMVLDGFNPNTYTYVAAISACTNI 484
+ M +++SW +LIS ++ G E+A+ L+ M+ G+ PN YTY + ++ C+++
Sbjct: 363 EDMDGHDMVSWNSLISGHVGSGQYEDAIELLKEMLFQGYKPNLYTYSSILNICSDV 418
Score = 75.5 bits (184), Expect = 7e-12
Identities = 38/111 (34%), Positives = 58/111 (52%)
Frame = +2
Query: 149 FSSLIRSCIDKKSIKNGKSVHAQLIVSGSKPDVFTNNHLVTMYLKLNHLGYAQKVFDKMG 328
+SS++ C D +I+ GK H +I +V + L+ MY K L A+KVFD +
Sbjct: 408 YSSILNICSDVPAIEWGKQTHCCIIKPAFDSNVVVGSALIDMYAKCGVLNAARKVFDYLT 467
Query: 329 KRNVISWTTLISSYMQMGLSENALNGLRSMVLDGFNPNTYTYVAAISACTN 481
+N++SW T++ Y Q G + AL M D PN T+V +SAC +
Sbjct: 468 SKNLVSWNTMLVGYAQHGFAREALEIYCMMQRDDVKPNDVTFVGVLSACAH 518
Score = 64.3 bits (155), Expect = 2e-08
Identities = 31/110 (28%), Positives = 57/110 (51%)
Frame = +2
Query: 152 SSLIRSCIDKKSIKNGKSVHAQLIVSGSKPDVFTNNHLVTMYLKLNHLGYAQKVFDKMGK 331
+S++ C + +K G +H ++ G + D F L++ Y K L A +VF ++ +
Sbjct: 207 ASVLSVCAGLEDLKVGMQIHGLVVKCGLEFDKFVETGLISFYTKCGELILAGQVFLEVNQ 266
Query: 332 RNVISWTTLISSYMQMGLSENALNGLRSMVLDGFNPNTYTYVAAISACTN 481
NV +WT+LI Y+Q G E A++ + G P+ T+ + + AC +
Sbjct: 267 SNVAAWTSLIGGYVQQGRREEAIDLFLKLHSSGIRPSERTFSSVLGACAD 316
Score = 59.7 bits (143), Expect = 4e-07
Identities = 37/112 (33%), Positives = 52/112 (46%)
Frame = +2
Query: 149 FSSLIRSCIDKKSIKNGKSVHAQLIVSGSKPDVFTNNHLVTMYLKLNHLGYAQKVFDKMG 328
F S + +C GK VH ++ SG N L+ MY K L AQ VFD M
Sbjct: 105 FVSAVSACASLGDGSVGKEVHGRIYRSGVDFSTPVCNSLINMYGKCGLLKSAQLVFDAML 164
Query: 329 KRNVISWTTLISSYMQMGLSENALNGLRSMVLDGFNPNTYTYVAAISACTNI 484
+ N+ISWT+L+S Y Q G + +L G N +T + +S C +
Sbjct: 165 EPNLISWTSLLSCYCQQGENMESLKIFVQSRRVGVRVNEFTCASVLSVCAGL 216
>ref|XP_006436646.1| hypothetical protein CICLE_v10030857mg [Citrus clementina]
gi|567888250|ref|XP_006436647.1| hypothetical protein
CICLE_v10030857mg [Citrus clementina]
gi|568878438|ref|XP_006492198.1| PREDICTED:
pentatricopeptide repeat-containing protein
At2g27610-like [Citrus sinensis]
gi|557538842|gb|ESR49886.1| hypothetical protein
CICLE_v10030857mg [Citrus clementina]
gi|557538843|gb|ESR49887.1| hypothetical protein
CICLE_v10030857mg [Citrus clementina]
Length = 697
Score = 115 bits (288), Expect = 6e-24
Identities = 57/113 (50%), Positives = 78/113 (69%)
Frame = +2
Query: 143 MNFSSLIRSCIDKKSIKNGKSVHAQLIVSGSKPDVFTNNHLVTMYLKLNHLGYAQKVFDK 322
M+FS L+R D K I G+++HA++I SG P+V T NHL+ MY+K + + AQK+FD+
Sbjct: 1 MSFSRLLRLFGDSKCILKGRTLHAKMITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDE 60
Query: 323 MGKRNVISWTTLISSYMQMGLSENALNGLRSMVLDGFNPNTYTYVAAISACTN 481
M +RNVISW+ LIS + Q+G+ E ALN R MV PN YTYV A+SAC +
Sbjct: 61 MPERNVISWSALISGFSQIGMPEVALNYFRLMVCCVLEPNYYTYVGAVSACAS 113
Score = 74.3 bits (181), Expect = 2e-11
Identities = 37/112 (33%), Positives = 59/112 (52%)
Frame = +2
Query: 149 FSSLIRSCIDKKSIKNGKSVHAQLIVSGSKPDVFTNNHLVTMYLKLNHLGYAQKVFDKMG 328
+S+++ D +I+ GK H ++ G +V + LV MY K L A+KVFD +
Sbjct: 407 YSNILNISSDIPAIEWGKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLS 466
Query: 329 KRNVISWTTLISSYMQMGLSENALNGLRSMVLDGFNPNTYTYVAAISACTNI 484
+N++SW T++ Y Q GL AL M + PN T++ +SAC +I
Sbjct: 467 SKNLVSWNTMLVGYAQHGLGREALEIYSMMQENKIKPNDNTFIGVLSACVHI 518
Score = 66.6 bits (161), Expect = 3e-09
Identities = 40/139 (28%), Positives = 73/139 (52%), Gaps = 5/139 (3%)
Frame = +2
Query: 74 NKISINSIARNFASHYICSTLSPMNFSSL--IRSCIDKKSIKNGKSVHAQLIVSGSKPDV 247
++I + +A N+ +C L P ++ + + +C + ++GK +H ++ SG + +
Sbjct: 77 SQIGMPEVALNYFRLMVCCVLEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNS 136
Query: 248 FTNNHLVTMYLKLNHLGYAQKVFDKMGKRNVISWTTLISSYMQMGLSENALNGLRSMVL- 424
+N L+ MY K L AQ VFD +RN ISW +L+SSY Q G ++GL+ +L
Sbjct: 137 HVSNCLINMYGKCGLLSSAQFVFDASLERNSISWVSLLSSYCQCG---EHVHGLKIFLLS 193
Query: 425 --DGFNPNTYTYVAAISAC 475
G + ++ + + AC
Sbjct: 194 RKSGVAISEFSCASVLGAC 212
Score = 61.2 bits (147), Expect = 1e-07
Identities = 33/116 (28%), Positives = 59/116 (50%)
Frame = +2
Query: 137 SPMNFSSLIRSCIDKKSIKNGKSVHAQLIVSGSKPDVFTNNHLVTMYLKLNHLGYAQKVF 316
S + FS ++ + D K G+ +H+ +I G F N ++ Y K L + K F
Sbjct: 302 SEVTFSYVLGAFADVKETIGGRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTF 361
Query: 317 DKMGKRNVISWTTLISSYMQMGLSENALNGLRSMVLDGFNPNTYTYVAAISACTNI 484
D+M + +V+SW LI+ ++ A+ L+ M+ +G PN YTY ++ ++I
Sbjct: 362 DEMDEHDVVSWNALIAGHLASCHYGEAIELLKDMLFEGHCPNLYTYSNILNISSDI 417
>ref|XP_006855329.1| hypothetical protein AMTR_s00057p00087430 [Amborella trichopoda]
gi|548859095|gb|ERN16796.1| hypothetical protein
AMTR_s00057p00087430 [Amborella trichopoda]
Length = 734
Score = 110 bits (275), Expect = 2e-22
Identities = 54/114 (47%), Positives = 75/114 (65%)
Frame = +2
Query: 143 MNFSSLIRSCIDKKSIKNGKSVHAQLIVSGSKPDVFTNNHLVTMYLKLNHLGYAQKVFDK 322
M SSLIR+ +S+ GK +HA LI SG +V+ NNHL++MY++ L A VFD+
Sbjct: 1 MLLSSLIRTLGHAQSLSKGKMLHANLITSGFPANVYINNHLMSMYVRCGCLNDAHSVFDQ 60
Query: 323 MGKRNVISWTTLISSYMQMGLSENALNGLRSMVLDGFNPNTYTYVAAISACTNI 484
M +RN+ISWT +IS Y Q GL + AL ++MV +GF PN +TYV +SAC +
Sbjct: 61 MAERNLISWTGIISGYSQHGLPDEALELFQNMVFEGFYPNDFTYVGLLSACAQL 114
Score = 74.3 bits (181), Expect = 2e-11
Identities = 40/121 (33%), Positives = 61/121 (50%), Gaps = 2/121 (1%)
Frame = +2
Query: 128 STLSPMNFS--SLIRSCIDKKSIKNGKSVHAQLIVSGSKPDVFTNNHLVTMYLKLNHLGY 301
S L P F+ S +C + G +H+ G + F N + MY K L
Sbjct: 297 SGLKPNEFTLCSAFVACASNLLVMTGAQIHSVAFKLGFRVAGFVGNAAIEMYAKCGSLQE 356
Query: 302 AQKVFDKMGKRNVISWTTLISSYMQMGLSENALNGLRSMVLDGFNPNTYTYVAAISACTN 481
+ KVF ++ +RNV+SW LI+ Y QMG ++A+ L M+ +G PN YTY +S C +
Sbjct: 357 SAKVFQEIVERNVVSWNVLITGYAQMGYCKDAIKLLVRMLNEGIYPNLYTYSCVLSVCGD 416
Query: 482 I 484
+
Sbjct: 417 L 417
Score = 72.4 bits (176), Expect = 6e-11
Identities = 33/110 (30%), Positives = 57/110 (51%)
Frame = +2
Query: 152 SSLIRSCIDKKSIKNGKSVHAQLIVSGSKPDVFTNNHLVTMYLKLNHLGYAQKVFDKMGK 331
++++ SC + + G+ +H + G D F L+ MY+K LG + F +M +
Sbjct: 206 ATILGSCAGLEELSLGQQIHVSCVKCGLLMDGFVGTGLIDMYVKCGELGLGHRAFSEMYE 265
Query: 332 RNVISWTTLISSYMQMGLSENALNGLRSMVLDGFNPNTYTYVAAISACTN 481
++ SWT LI+ Y Q G E A++ + + L G PN +T +A AC +
Sbjct: 266 PSLASWTALIAGYAQQGQGEVAIDLFKKLQLSGLKPNEFTLCSAFVACAS 315
Score = 72.4 bits (176), Expect = 6e-11
Identities = 36/112 (32%), Positives = 59/112 (52%)
Frame = +2
Query: 149 FSSLIRSCIDKKSIKNGKSVHAQLIVSGSKPDVFTNNHLVTMYLKLNHLGYAQKVFDKMG 328
+S ++ C D + + GK VH+++I D F + L+ MY K L A VFD +
Sbjct: 407 YSCVLSVCGDLPAPEWGKQVHSRIIKPRFDLDPFVSTSLIDMYSKCGQLVKAWTVFDSLT 466
Query: 329 KRNVISWTTLISSYMQMGLSENALNGLRSMVLDGFNPNTYTYVAAISACTNI 484
++++SW T++ +Y G E ALN + M PN T++A +SAC +
Sbjct: 467 SKSLVSWNTMLMAYAHHGFGEEALNLFKDMEDANMRPNDVTFIAVLSACGRV 518
Score = 65.1 bits (157), Expect = 9e-09
Identities = 30/112 (26%), Positives = 58/112 (51%)
Frame = +2
Query: 149 FSSLIRSCIDKKSIKNGKSVHAQLIVSGSKPDVFTNNHLVTMYLKLNHLGYAQKVFDKMG 328
+ L+ +C +++ GK HA+++ S + + F +N LV +Y K + Y+ ++FD++
Sbjct: 104 YVGLLSACAQLEALNYGKETHARILKSDNGFNTFLSNSLVNLYAKCGLIEYSSRLFDEIP 163
Query: 329 KRNVISWTTLISSYMQMGLSENALNGLRSMVLDGFNPNTYTYVAAISACTNI 484
+ N ISWT++I+ + Q G AL G N +T + +C +
Sbjct: 164 QPNFISWTSIIAGFCQSGEHMEALRFFSKSQEAGIKVNEFTSATILGSCAGL 215
>ref|XP_002519063.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223541726|gb|EEF43274.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 386
Score = 102 bits (253), Expect = 7e-20
Identities = 55/139 (39%), Positives = 83/139 (59%), Gaps = 2/139 (1%)
Frame = +2
Query: 74 NKISINSIARNFASHYICSTLSPM--NFSSLIRSCIDKKSIKNGKSVHAQLIVSGSKPDV 247
+K SI S+ F + + S +SP F+S+++SC D S+K GK VH ++V+G DV
Sbjct: 89 HKFSIYSLF--FYNCMLLSDISPSAYTFTSIVKSCADLSSLKLGKVVHGHVLVNGFGLDV 146
Query: 248 FTNNHLVTMYLKLNHLGYAQKVFDKMGKRNVISWTTLISSYMQMGLSENALNGLRSMVLD 427
+ LV Y K LG A+KVFDKM +R+V+SW ++IS Y Q G A+ + M +
Sbjct: 147 YVQAALVACYAKSGDLGNARKVFDKMRERSVVSWNSIISGYEQNGFGREAIRLFKKMREE 206
Query: 428 GFNPNTYTYVAAISACTNI 484
GF P++ T+V +SAC +
Sbjct: 207 GFEPDSATFVIVLSACAQL 225
Score = 63.5 bits (153), Expect = 3e-08
Identities = 35/111 (31%), Positives = 56/111 (50%)
Frame = +2
Query: 149 FSSLIRSCIDKKSIKNGKSVHAQLIVSGSKPDVFTNNHLVTMYLKLNHLGYAQKVFDKMG 328
F ++ +C ++ G VH I G +V L+ MY + + A++VFD M
Sbjct: 215 FVIVLSACAQLGALSMGCWVHKYTIGHGLDLNVVLGTSLINMYTRCGTVTKAREVFDSMK 274
Query: 329 KRNVISWTTLISSYMQMGLSENALNGLRSMVLDGFNPNTYTYVAAISACTN 481
++NV++WT +IS Y G A+ M G PN+ T+VA +SAC +
Sbjct: 275 EKNVVTWTAMISGYGTNGHGRQAVQLFDEMKRRGPCPNSVTFVAVLSACAH 325
>ref|XP_006384866.1| hypothetical protein POPTR_0004s21780g [Populus trichocarpa]
gi|550341634|gb|ERP62663.1| hypothetical protein
POPTR_0004s21780g [Populus trichocarpa]
Length = 571
Score = 99.4 bits (246), Expect = 4e-19
Identities = 48/111 (43%), Positives = 70/111 (63%)
Frame = +2
Query: 152 SSLIRSCIDKKSIKNGKSVHAQLIVSGSKPDVFTNNHLVTMYLKLNHLGYAQKVFDKMGK 331
S LI+ C+ +++I++GK +H LI +G P F N L+ MY+K L AQ VFDKM
Sbjct: 6 SKLIKCCLARRAIQHGKRIHVHLISNGHVPKTFLINILINMYVKFGLLHDAQDVFDKMPD 65
Query: 332 RNVISWTTLISSYMQMGLSENALNGLRSMVLDGFNPNTYTYVAAISACTNI 484
RNV+SWTT+IS+Y L++ AL L M+ +G PN +TY + + AC +
Sbjct: 66 RNVVSWTTMISAYSAAKLNDKALEFLVLMLREGVRPNMFTYSSVLRACDGL 116
Score = 68.6 bits (166), Expect = 8e-10
Identities = 38/110 (34%), Positives = 61/110 (55%)
Frame = +2
Query: 152 SSLIRSCIDKKSIKNGKSVHAQLIVSGSKPDVFTNNHLVTMYLKLNHLGYAQKVFDKMGK 331
+S++R+C ++ G+ VH ++ D+ NN L+ MY K L A VF +M +
Sbjct: 205 TSVLRACTGLALLELGRQVHVHVLKYDQ--DLILNNALLDMYCKCGSLEDANAVFVRMVE 262
Query: 332 RNVISWTTLISSYMQMGLSENALNGLRSMVLDGFNPNTYTYVAAISACTN 481
++VISW+T+I+ Q G S+ AL SM + G PN T V + AC++
Sbjct: 263 KDVISWSTMIAGLAQNGYSKEALKLFESMKVLGIKPNYVTIVGVLFACSH 312
Score = 56.6 bits (135), Expect = 3e-06
Identities = 31/112 (27%), Positives = 58/112 (51%)
Frame = +2
Query: 149 FSSLIRSCIDKKSIKNGKSVHAQLIVSGSKPDVFTNNHLVTMYLKLNHLGYAQKVFDKMG 328
+SS++R+C + N + +H +I G DVF + L+ +Y + L A +VFD+M
Sbjct: 106 YSSVLRAC---DGLFNLRQLHCCIIKIGLDSDVFVRSALIDVYSRWGELENALRVFDEMV 162
Query: 329 KRNVISWTTLISSYMQMGLSENALNGLRSMVLDGFNPNTYTYVAAISACTNI 484
+++ W+++I+ + Q + AL + M GF T + + ACT +
Sbjct: 163 TGDLVVWSSIIAGFAQNSDGDEALRLFKRMKRAGFLAQQTTLTSVLRACTGL 214
>gb|EOX98930.1| Pentatricopeptide repeat (PPR) superfamily protein [Theobroma
cacao]
Length = 642
Score = 99.4 bits (246), Expect = 4e-19
Identities = 46/114 (40%), Positives = 74/114 (64%)
Frame = +2
Query: 143 MNFSSLIRSCIDKKSIKNGKSVHAQLIVSGSKPDVFTNNHLVTMYLKLNHLGYAQKVFDK 322
+ +S LI+SC+ + +++ GK VH + +G +P F N L++MY+K N L A+ +FD+
Sbjct: 74 VTYSELIKSCLARNAVEQGKLVHKHVFSNGHQPKTFLVNILISMYVKFNLLEQARALFDQ 133
Query: 323 MGKRNVISWTTLISSYMQMGLSENALNGLRSMVLDGFNPNTYTYVAAISACTNI 484
M +RNV++WTT+IS+Y LS AL L M+ +G PNTYT+ + + AC +
Sbjct: 134 MPERNVVTWTTMISAYANAKLSVKALEFLVLMLREGVLPNTYTFSSVLRACDGL 187
Score = 67.4 bits (163), Expect = 2e-09
Identities = 37/110 (33%), Positives = 59/110 (53%)
Frame = +2
Query: 152 SSLIRSCIDKKSIKNGKSVHAQLIVSGSKPDVFTNNHLVTMYLKLNHLGYAQKVFDKMGK 331
+S++R+C ++ G+ VH ++ D+ NN L+ MY K L A+ VF++M
Sbjct: 276 TSVLRACTGLALLEVGRQVHVHVLKFNV--DLILNNALLDMYCKCGSLEDAKSVFERMVD 333
Query: 332 RNVISWTTLISSYMQMGLSENALNGLRSMVLDGFNPNTYTYVAAISACTN 481
R+VISW+T+I+ Q G S AL M G PN T + + AC++
Sbjct: 334 RDVISWSTMIAGLAQNGYSREALKFFDLMKASGVKPNYITILGVLFACSH 383
Score = 63.5 bits (153), Expect = 3e-08
Identities = 35/112 (31%), Positives = 60/112 (53%)
Frame = +2
Query: 149 FSSLIRSCIDKKSIKNGKSVHAQLIVSGSKPDVFTNNHLVTMYLKLNHLGYAQKVFDKMG 328
FSS++R+C + N + +H +I G + DVF + L+ +Y KL+ L A VF++M
Sbjct: 177 FSSVLRAC---DGLVNLRQLHCGIIKVGLESDVFVRSALIDVYSKLDKLKDAVCVFNEMQ 233
Query: 329 KRNVISWTTLISSYMQMGLSENALNGLRSMVLDGFNPNTYTYVAAISACTNI 484
R+ + W ++I Q + ALN + M GF+ + T + + ACT +
Sbjct: 234 TRDYVVWNSIIGGLAQNSDGDEALNQFKRMKRAGFSADQSTLTSVLRACTGL 285
>ref|XP_004504725.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
mitochondrial-like [Cicer arietinum]
Length = 632
Score = 98.6 bits (244), Expect = 8e-19
Identities = 47/123 (38%), Positives = 77/123 (62%)
Frame = +2
Query: 116 HYICSTLSPMNFSSLIRSCIDKKSIKNGKSVHAQLIVSGSKPDVFTNNHLVTMYLKLNHL 295
H +C+ + +S LI+ C+ ++++ GK VH + +G +P F N L+ MY+K N L
Sbjct: 57 HGVCA--DAITYSELIKCCLAHRAVREGKRVHHHIFSNGYQPKAFLINTLLNMYVKFNLL 114
Query: 296 GYAQKVFDKMGKRNVISWTTLISSYMQMGLSENALNGLRSMVLDGFNPNTYTYVAAISAC 475
AQ +FDKM +RNV+SWTT+IS++ L++ A+ L M+ DG PN+YT+ + + AC
Sbjct: 115 EEAQILFDKMPERNVVSWTTMISAFSCAKLNDRAMKLLIFMIRDGAMPNSYTFSSVLRAC 174
Query: 476 TNI 484
+
Sbjct: 175 ERL 177
Score = 67.8 bits (164), Expect = 1e-09
Identities = 36/110 (32%), Positives = 62/110 (56%)
Frame = +2
Query: 152 SSLIRSCIDKKSIKNGKSVHAQLIVSGSKPDVFTNNHLVTMYLKLNHLGYAQKVFDKMGK 331
+S++R+C ++ G+ HA ++ D+ +N L+ MY K L A+ +F++M
Sbjct: 266 TSVLRACTGLSLLELGRQAHAHVLKFDQ--DLILSNALLDMYCKCGSLEDAKFIFNRMAD 323
Query: 332 RNVISWTTLISSYMQMGLSENALNGLRSMVLDGFNPNTYTYVAAISACTN 481
++VISW+T+I+ Q G S ALN SM + G PN T + + AC++
Sbjct: 324 KDVISWSTMIAGLAQNGFSMEALNLFDSMKVSGPRPNYITILGVLFACSH 373
Score = 60.8 bits (146), Expect = 2e-07
Identities = 34/112 (30%), Positives = 62/112 (55%)
Frame = +2
Query: 149 FSSLIRSCIDKKSIKNGKSVHAQLIVSGSKPDVFTNNHLVTMYLKLNHLGYAQKVFDKMG 328
FSS++R+C + + + K +H+ ++ +G + DVF + L+ Y KL L A VF +M
Sbjct: 167 FSSVLRAC---ERLCDLKQLHSSIVKAGLESDVFVRSALIDAYSKLGELLEALGVFREMV 223
Query: 329 KRNVISWTTLISSYMQMGLSENALNGLRSMVLDGFNPNTYTYVAAISACTNI 484
+ + W ++I+++ Q + ALN +SM GF + T + + ACT +
Sbjct: 224 TGDSVVWNSIIAAFAQHSDGDEALNLYKSMRRAGFPADQSTLTSVLRACTGL 275
>ref|XP_004253182.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
mitochondrial-like [Solanum lycopersicum]
Length = 654
Score = 98.2 bits (243), Expect = 1e-18
Identities = 44/114 (38%), Positives = 73/114 (64%)
Frame = +2
Query: 143 MNFSSLIRSCIDKKSIKNGKSVHAQLIVSGSKPDVFTNNHLVTMYLKLNHLGYAQKVFDK 322
+ +S LI+ C+ + ++++GK VH + +G +P F N L+ MY+K N L AQ +FD+
Sbjct: 86 VTYSELIKCCLARGAVEHGKRVHQHVFSNGYEPKTFLVNTLMNMYVKFNMLEEAQALFDQ 145
Query: 323 MGKRNVISWTTLISSYMQMGLSENALNGLRSMVLDGFNPNTYTYVAAISACTNI 484
M +RNV+SWTT+I++Y ++ AL L M+ DG PN +TY + + AC ++
Sbjct: 146 MSERNVVSWTTMIAAYSSAKINNKALEFLIFMMRDGVKPNMFTYSSVLRACDDL 199
Score = 71.2 bits (173), Expect = 1e-10
Identities = 36/110 (32%), Positives = 62/110 (56%)
Frame = +2
Query: 152 SSLIRSCIDKKSIKNGKSVHAQLIVSGSKPDVFTNNHLVTMYLKLNHLGYAQKVFDKMGK 331
+S +R+C ++ G+ VH ++ K D+ +N L+ MY K +L A ++F +M +
Sbjct: 288 TSALRACTSLALLEVGRQVHVHVLKF--KRDLILDNALLDMYCKCGNLEDAHQIFSQMVE 345
Query: 332 RNVISWTTLISSYMQMGLSENALNGLRSMVLDGFNPNTYTYVAAISACTN 481
++VISW+T+I Y Q G S AL + M + G PN T + + AC++
Sbjct: 346 KDVISWSTMIIGYAQNGFSRKALELFKEMKVSGIRPNYITVLGVLFACSH 395
Score = 63.5 bits (153), Expect = 3e-08
Identities = 38/141 (26%), Positives = 71/141 (50%), Gaps = 2/141 (1%)
Frame = +2
Query: 68 AGNKISINSIARNFASHYICSTLSP--MNFSSLIRSCIDKKSIKNGKSVHAQLIVSGSKP 241
A + IN+ A F + + P +SS++R+C D + N + +H L+ G +
Sbjct: 160 AYSSAKINNKALEFLIFMMRDGVKPNMFTYSSVLRACDD---LSNLRQLHCSLLKVGLES 216
Query: 242 DVFTNNHLVTMYLKLNHLGYAQKVFDKMGKRNVISWTTLISSYMQMGLSENALNGLRSMV 421
DVF + L+ +Y K+ L A F++M +++ W ++I + Q + AL + M
Sbjct: 217 DVFVRSALIDVYSKMGQLECAMCTFNEMVTGDLVVWNSIIGGFAQNSDGDEALTLFKRMK 276
Query: 422 LDGFNPNTYTYVAAISACTNI 484
GF+ + T +A+ ACT++
Sbjct: 277 RAGFSADQSTLTSALRACTSL 297
>gb|EXC35441.1| hypothetical protein L484_026747 [Morus notabilis]
Length = 711
Score = 97.4 bits (241), Expect = 2e-18
Identities = 44/112 (39%), Positives = 68/112 (60%)
Frame = +2
Query: 149 FSSLIRSCIDKKSIKNGKSVHAQLIVSGSKPDVFTNNHLVTMYLKLNHLGYAQKVFDKMG 328
++ +++C D ++ +GK++H Q + G F N L TMY K L Y +FDKMG
Sbjct: 220 YAIALKACADLSALIHGKAIHTQTLKKGLNESSFVANSLATMYKKCGKLDYGFLLFDKMG 279
Query: 329 KRNVISWTTLISSYMQMGLSENALNGLRSMVLDGFNPNTYTYVAAISACTNI 484
+V+SWT++IS+Y+QMG ++A+ M DG +PN YT+ A IS C N+
Sbjct: 280 TPDVVSWTSIISTYIQMGREKDAIEAFIRMREDGVSPNDYTFAALISGCANL 331
Score = 70.9 bits (172), Expect = 2e-10
Identities = 32/110 (29%), Positives = 59/110 (53%)
Frame = +2
Query: 152 SSLIRSCIDKKSIKNGKSVHAQLIVSGSKPDVFTNNHLVTMYLKLNHLGYAQKVFDKMGK 331
SSL+ C ++ GK +HA ++ G + + L+ MY K + A K+FD +
Sbjct: 423 SSLLSVCGSMAMLEQGKQLHAHVLSVGLEHKSLIQSSLINMYSKCGSIKEASKIFDATEQ 482
Query: 332 RNVISWTTLISSYMQMGLSENALNGLRSMVLDGFNPNTYTYVAAISACTN 481
N++SWT +I Y + G S+ A++ + G P+ T++ A++AC++
Sbjct: 483 YNIVSWTAMIGGYAEHGYSQEAIDLFEKIPKVGLRPDCVTFIGALTACSH 532
Score = 63.9 bits (154), Expect = 2e-08
Identities = 30/109 (27%), Positives = 55/109 (50%)
Frame = +2
Query: 149 FSSLIRSCIDKKSIKNGKSVHAQLIVSGSKPDVFTNNHLVTMYLKLNHLGYAQKVFDKMG 328
F++LI C + ++ G+ +HA ++ G + N ++ MY K L +F M
Sbjct: 321 FAALISGCANLARVEWGEQLHAHVLCRGMADYLSVANSIMAMYSKCGRLVSTSTIFRGMS 380
Query: 329 KRNVISWTTLISSYMQMGLSENALNGLRSMVLDGFNPNTYTYVAAISAC 475
K++++SW+T+I+ Y Q+G E M +G PN + + +S C
Sbjct: 381 KKDIVSWSTIIAGYSQVGHGEEGFEYFSWMRREGPKPNEFALSSLLSVC 429
Score = 60.1 bits (144), Expect = 3e-07
Identities = 34/117 (29%), Positives = 54/117 (46%)
Frame = +2
Query: 134 LSPMNFSSLIRSCIDKKSIKNGKSVHAQLIVSGSKPDVFTNNHLVTMYLKLNHLGYAQKV 313
L P S +++C ++ G +H I SG VF + L+ MY K+ + +V
Sbjct: 114 LDPFVLSLALKACGLSMNLYCGALLHGCSIKSGLVNSVFVGSTLLDMYAKMGKIELGCRV 173
Query: 314 FDKMGKRNVISWTTLISSYMQMGLSENALNGLRSMVLDGFNPNTYTYVAAISACTNI 484
FD M RN++SWT +IS + G + L M + Y Y A+ AC ++
Sbjct: 174 FDHMPDRNIVSWTAIISGLVHAGYNAQGLFYFSKMWKLKVECDAYAYAIALKACADL 230
>ref|XP_006580029.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
mitochondrial-like [Glycine max]
Length = 637
Score = 97.1 bits (240), Expect = 2e-18
Identities = 45/114 (39%), Positives = 69/114 (60%)
Frame = +2
Query: 143 MNFSSLIRSCIDKKSIKNGKSVHAQLIVSGSKPDVFTNNHLVTMYLKLNHLGYAQKVFDK 322
+ +S LI+ C+ +++ GK VH + +G P F N L+ MY+K N L AQ +FDK
Sbjct: 69 ITYSELIKCCLAHGAVREGKRVHRHIFSNGYHPKTFLTNILINMYVKFNLLEEAQVLFDK 128
Query: 323 MGKRNVISWTTLISSYMQMGLSENALNGLRSMVLDGFNPNTYTYVAAISACTNI 484
M +RNV+SWTT+IS+Y L++ A+ L M DG PN +T+ + + AC +
Sbjct: 129 MPERNVVSWTTMISAYSNAQLNDRAMRLLAFMFRDGVMPNMFTFSSVLRACERL 182
Score = 73.9 bits (180), Expect = 2e-11
Identities = 45/151 (29%), Positives = 77/151 (50%), Gaps = 14/151 (9%)
Frame = +2
Query: 71 GNKISINSIARNFASH-------YICSTLSPMNF-------SSLIRSCIDKKSIKNGKSV 208
G+ + NSI FA H ++ ++ + F +S++R+C ++ G+
Sbjct: 230 GDSVVWNSIIAAFAQHSDGDEALHLYKSMRRVGFPADQSTLTSVLRACTSLSLLELGRQA 289
Query: 209 HAQLIVSGSKPDVFTNNHLVTMYLKLNHLGYAQKVFDKMGKRNVISWTTLISSYMQMGLS 388
H ++ D+ NN L+ MY K L A+ +F++M K++VISW+T+I+ Q G S
Sbjct: 290 HVHVLKFDQ--DLILNNALLDMYCKCGSLEDAKFIFNRMAKKDVISWSTMIAGLAQNGFS 347
Query: 389 ENALNGLRSMVLDGFNPNTYTYVAAISACTN 481
ALN SM + G PN T + + AC++
Sbjct: 348 MEALNLFESMKVQGPKPNHITILGVLFACSH 378
Score = 59.3 bits (142), Expect = 5e-07
Identities = 33/112 (29%), Positives = 64/112 (57%)
Frame = +2
Query: 149 FSSLIRSCIDKKSIKNGKSVHAQLIVSGSKPDVFTNNHLVTMYLKLNHLGYAQKVFDKMG 328
FSS++R+C + + + K +H+ ++ G + DVF + L+ +Y K+ L A KVF +M
Sbjct: 172 FSSVLRAC---ERLYDLKQLHSWIMKVGLESDVFVRSALIDVYSKMGELLEALKVFREMM 228
Query: 329 KRNVISWTTLISSYMQMGLSENALNGLRSMVLDGFNPNTYTYVAAISACTNI 484
+ + W ++I+++ Q + AL+ +SM GF + T + + ACT++
Sbjct: 229 TGDSVVWNSIIAAFAQHSDGDEALHLYKSMRRVGFPADQSTLTSVLRACTSL 280
>ref|XP_002514406.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223546503|gb|EEF48002.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 436
Score = 97.1 bits (240), Expect = 2e-18
Identities = 45/112 (40%), Positives = 72/112 (64%)
Frame = +2
Query: 149 FSSLIRSCIDKKSIKNGKSVHAQLIVSGSKPDVFTNNHLVTMYLKLNHLGYAQKVFDKMG 328
+S LI+ C+ + +I+ GK V+ L +G +P++F N L+ MY+K N L A +FD+M
Sbjct: 60 YSELIKCCLARNAIEQGKQVYKHLSSNGYQPNIFLINMLLNMYVKFNLLDEALTLFDQMP 119
Query: 329 KRNVISWTTLISSYMQMGLSENALNGLRSMVLDGFNPNTYTYVAAISACTNI 484
+RNV+SWTT+IS++ L++ AL L M+ +G PN YTY + + AC +
Sbjct: 120 ERNVVSWTTMISAFSNAKLNDKALEFLICMLREGVKPNVYTYSSILRACDGV 171
Score = 68.9 bits (167), Expect = 6e-10
Identities = 37/110 (33%), Positives = 60/110 (54%)
Frame = +2
Query: 152 SSLIRSCIDKKSIKNGKSVHAQLIVSGSKPDVFTNNHLVTMYLKLNHLGYAQKVFDKMGK 331
+S++R+C ++ G+ VH + D+ NN L+ MY K L A VF +M +
Sbjct: 260 TSVLRACTGLALLELGRQVHVHVFKHDQ--DLVLNNALLDMYCKCGSLEDANYVFTRMVE 317
Query: 332 RNVISWTTLISSYMQMGLSENALNGLRSMVLDGFNPNTYTYVAAISACTN 481
++VISW+T+I+ + Q G S AL SM + G PN T + + AC++
Sbjct: 318 KDVISWSTMIAGFAQNGYSREALKLFESMKVSGTKPNYITILGVLFACSH 367
Score = 61.6 bits (148), Expect = 1e-07
Identities = 33/112 (29%), Positives = 59/112 (52%)
Frame = +2
Query: 149 FSSLIRSCIDKKSIKNGKSVHAQLIVSGSKPDVFTNNHLVTMYLKLNHLGYAQKVFDKMG 328
+SS++R+C + N + +H +I SG DV+ + L+ +Y K A VF++M
Sbjct: 161 YSSILRAC---DGVYNLRQLHGNIIKSGLDSDVYVRSALIDIYSKWGESENALYVFNEMV 217
Query: 329 KRNVISWTTLISSYMQMGLSENALNGLRSMVLDGFNPNTYTYVAAISACTNI 484
++I W ++I+ + Q + ALN +SM +GF N + + ACT +
Sbjct: 218 TGDLIVWNSIIAGFAQNNDGDEALNLFKSMKRNGFPANQSALTSVLRACTGL 269
>gb|EXB40433.1| hypothetical protein L484_013736 [Morus notabilis]
Length = 640
Score = 96.3 bits (238), Expect = 4e-18
Identities = 45/114 (39%), Positives = 71/114 (62%)
Frame = +2
Query: 143 MNFSSLIRSCIDKKSIKNGKSVHAQLIVSGSKPDVFTNNHLVTMYLKLNHLGYAQKVFDK 322
+ +S LI+ C+ + +++ G+ VH + +G +P F N L+ MY+K L AQK+FD
Sbjct: 72 ITYSELIKCCLARGAVEEGRIVHRHVFSNGYQPKTFLINVLINMYVKFGFLEEAQKLFDI 131
Query: 323 MGKRNVISWTTLISSYMQMGLSENALNGLRSMVLDGFNPNTYTYVAAISACTNI 484
M +RNV+SWTT+I++Y L+E AL L M+ DG PN +TY + + AC +
Sbjct: 132 MPERNVVSWTTIIAAYSNAKLNERALEFLVLMLRDGVMPNMFTYSSVLRACDGL 185
Score = 68.6 bits (166), Expect = 8e-10
Identities = 36/110 (32%), Positives = 60/110 (54%)
Frame = +2
Query: 152 SSLIRSCIDKKSIKNGKSVHAQLIVSGSKPDVFTNNHLVTMYLKLNHLGYAQKVFDKMGK 331
+S++R+C ++ G+ VH ++ D+ NN L+ MY K A VF KM +
Sbjct: 274 TSILRACTGLALLELGRQVHVHVLKFDQ--DLILNNALLDMYCKCGSFEDANIVFTKMVE 331
Query: 332 RNVISWTTLISSYMQMGLSENALNGLRSMVLDGFNPNTYTYVAAISACTN 481
++VISW+T+I+ Q G S+ AL +M + G PN T + + AC++
Sbjct: 332 KDVISWSTMIAGLAQNGFSQEALKLFENMKVSGSKPNNITILGVLFACSH 381
Score = 62.0 bits (149), Expect = 8e-08
Identities = 33/112 (29%), Positives = 60/112 (53%)
Frame = +2
Query: 149 FSSLIRSCIDKKSIKNGKSVHAQLIVSGSKPDVFTNNHLVTMYLKLNHLGYAQKVFDKMG 328
+SS++R+C + N + +H + +G + DVF + L+ +Y KL L A VF++M
Sbjct: 175 YSSVLRAC---DGLWNLRQLHCSIFKAGLESDVFVRSALIDVYSKLGELRNALGVFNEMV 231
Query: 329 KRNVISWTTLISSYMQMGLSENALNGLRSMVLDGFNPNTYTYVAAISACTNI 484
R+ + W ++I + Q G ALN ++M F+ + T + + ACT +
Sbjct: 232 TRDSVVWNSIIGGFAQNGDGYEALNLFKNMKRAAFHADQSTLTSILRACTGL 283
>ref|XP_004290083.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
mitochondrial-like [Fragaria vesca subsp. vesca]
Length = 585
Score = 96.3 bits (238), Expect = 4e-18
Identities = 44/112 (39%), Positives = 72/112 (64%)
Frame = +2
Query: 149 FSSLIRSCIDKKSIKNGKSVHAQLIVSGSKPDVFTNNHLVTMYLKLNHLGYAQKVFDKMG 328
+S LI+ C+ +++++ G+ VH + +G P F N L+ MY+K + L AQ +FD+M
Sbjct: 19 YSDLIKCCLARRAVQQGRLVHKHVFSNGRHPQTFLINILINMYVKFSLLEEAQHLFDEMR 78
Query: 329 KRNVISWTTLISSYMQMGLSENALNGLRSMVLDGFNPNTYTYVAAISACTNI 484
+RNVISWTT+IS+Y + ++ AL L MV +G PN++TY + + AC +
Sbjct: 79 QRNVISWTTMISAYCRAKMNSKALEALVLMVREGVWPNSFTYSSVLRACEGL 130
Score = 72.0 bits (175), Expect = 8e-11
Identities = 38/110 (34%), Positives = 61/110 (55%)
Frame = +2
Query: 152 SSLIRSCIDKKSIKNGKSVHAQLIVSGSKPDVFTNNHLVTMYLKLNHLGYAQKVFDKMGK 331
+S++R+C ++ G+ VH + G PD+ NN L+ MY K L A VF +M +
Sbjct: 219 TSVLRACTALALLELGRQVHVHAMKYG--PDLILNNALLDMYCKCGSLEDANSVFTRMVE 276
Query: 332 RNVISWTTLISSYMQMGLSENALNGLRSMVLDGFNPNTYTYVAAISACTN 481
++VISW+T+I+ Q G S+ AL M + G PN T + + AC++
Sbjct: 277 KDVISWSTMIAGLAQNGFSQEALKLFEEMKVSGTKPNYITVLGVMFACSH 326
Score = 60.1 bits (144), Expect = 3e-07
Identities = 31/110 (28%), Positives = 59/110 (53%)
Frame = +2
Query: 149 FSSLIRSCIDKKSIKNGKSVHAQLIVSGSKPDVFTNNHLVTMYLKLNHLGYAQKVFDKMG 328
+SS++R+C + + + K +H ++ +G + DVF + L+ +Y KL L A VFD+M
Sbjct: 120 YSSVLRAC---EGLWDLKQLHCSIVKAGLESDVFVRSALIDVYSKLGDLRNAMGVFDEMV 176
Query: 329 KRNVISWTTLISSYMQMGLSENALNGLRSMVLDGFNPNTYTYVAAISACT 478
+ + W++++ ++ Q AL+ + M GF T + + ACT
Sbjct: 177 TGDSVVWSSIVGAFAQNSDGHEALDLFKRMKRAGFGAEEATLTSVLRACT 226
>ref|XP_006342434.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
mitochondrial-like isoform X1 [Solanum tuberosum]
Length = 654
Score = 95.9 bits (237), Expect = 5e-18
Identities = 43/114 (37%), Positives = 71/114 (62%)
Frame = +2
Query: 143 MNFSSLIRSCIDKKSIKNGKSVHAQLIVSGSKPDVFTNNHLVTMYLKLNHLGYAQKVFDK 322
+ +S LI+ C+ + +++ GK VH + +G +P F N L+ MY+K N L AQ +FD+
Sbjct: 86 VTYSELIKCCLARGAVEQGKRVHQHVFSNGYEPKTFLVNTLMNMYVKFNMLDEAQALFDQ 145
Query: 323 MGKRNVISWTTLISSYMQMGLSENALNGLRSMVLDGFNPNTYTYVAAISACTNI 484
M RNV+SWTT+I++Y ++ AL L M+ DG PN +T+ + + AC ++
Sbjct: 146 MSDRNVVSWTTMIAAYSSAKINNKALEFLILMMRDGVRPNMFTFSSVLRACDDL 199
Score = 71.2 bits (173), Expect = 1e-10
Identities = 36/110 (32%), Positives = 62/110 (56%)
Frame = +2
Query: 152 SSLIRSCIDKKSIKNGKSVHAQLIVSGSKPDVFTNNHLVTMYLKLNHLGYAQKVFDKMGK 331
+S +R+C ++ G+ VH ++ K D+ +N L+ MY K +L A ++F +M +
Sbjct: 288 TSALRACTSLALLEVGRQVHVHVLKF--KRDLILDNALLDMYCKCGNLEDAHQIFSQMVE 345
Query: 332 RNVISWTTLISSYMQMGLSENALNGLRSMVLDGFNPNTYTYVAAISACTN 481
++VISW+T+I Y Q G S AL + M + G PN T + + AC++
Sbjct: 346 KDVISWSTMIIGYAQNGFSRKALELFKEMKVSGIRPNYITVLGVLFACSH 395
Score = 63.5 bits (153), Expect = 3e-08
Identities = 33/112 (29%), Positives = 61/112 (54%)
Frame = +2
Query: 149 FSSLIRSCIDKKSIKNGKSVHAQLIVSGSKPDVFTNNHLVTMYLKLNHLGYAQKVFDKMG 328
FSS++R+C D + N + +H L+ G + DVF + L+ +Y K+ L A F++M
Sbjct: 189 FSSVLRACDD---LSNLRQLHCSLLKVGLESDVFVRSALIDVYSKMGQLKCAMCTFNEMV 245
Query: 329 KRNVISWTTLISSYMQMGLSENALNGLRSMVLDGFNPNTYTYVAAISACTNI 484
+++ W ++I + Q + AL + M GF+ + T +A+ ACT++
Sbjct: 246 TGDLVVWNSIIGGFAQNSDGDEALTLFKRMKRAGFSADQSTLTSALRACTSL 297
>ref|XP_002879469.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297325308|gb|EFH55728.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 583
Score = 95.9 bits (237), Expect = 5e-18
Identities = 47/120 (39%), Positives = 76/120 (63%), Gaps = 2/120 (1%)
Frame = +2
Query: 122 ICSTLSPMN--FSSLIRSCIDKKSIKNGKSVHAQLIVSGSKPDVFTNNHLVTMYLKLNHL 295
+ S +SP N F+S+I+SC D ++K GK VH +VSG D + LVT Y K +
Sbjct: 99 LSSNVSPSNYTFTSVIKSCADLSALKIGKGVHCHAVVSGFGLDTYVQAALVTFYSKCGDM 158
Query: 296 GYAQKVFDKMGKRNVISWTTLISSYMQMGLSENALNGLRSMVLDGFNPNTYTYVAAISAC 475
A++VFD+M +++V++W +L+S + Q GL+E+A+ M GF P++ T+V+ +SAC
Sbjct: 159 EAARQVFDRMPEKSVVAWNSLVSGFEQNGLAEDAIRVFYQMRESGFEPDSATFVSLLSAC 218
Score = 71.6 bits (174), Expect = 1e-10
Identities = 39/112 (34%), Positives = 61/112 (54%), Gaps = 1/112 (0%)
Frame = +2
Query: 149 FSSLIRSCIDKKSIKNGKSVHAQLIVSGSKPDVFTNNHLVTMYLKLNHLGYAQKVFDKMG 328
F SL+ +C +I G VH ++ G +V L+ +Y + +G A++VFDKM
Sbjct: 211 FVSLLSACAQTGAISLGSWVHQYIVSEGLDVNVKLGTALINLYSRCGDVGKAREVFDKMK 270
Query: 329 KRNVISWTTLISSYMQMGLSENALNGLRSMVLD-GFNPNTYTYVAAISACTN 481
+ NV +WT +IS+Y G + A++ M D G PN T+VA +SAC +
Sbjct: 271 ETNVAAWTAMISAYGTHGYGKQAVDLFNKMEDDCGSIPNNVTFVAVLSACAH 322
>gb|ESW30990.1| hypothetical protein PHAVU_002G199400g [Phaseolus vulgaris]
Length = 637
Score = 95.5 bits (236), Expect = 6e-18
Identities = 46/114 (40%), Positives = 69/114 (60%)
Frame = +2
Query: 143 MNFSSLIRSCIDKKSIKNGKSVHAQLIVSGSKPDVFTNNHLVTMYLKLNHLGYAQKVFDK 322
+ +S LI+ C+ +++ GK VH + +G P F N L+ MY+K N L AQ +FDK
Sbjct: 69 ITYSELIKCCLAHGAVREGKRVHHHIFSNGYHPKTFLINTLINMYVKFNLLEEAQVLFDK 128
Query: 323 MGKRNVISWTTLISSYMQMGLSENALNGLRSMVLDGFNPNTYTYVAAISACTNI 484
+ +RNV+SWTT+IS+Y L+E AL L M DG PN +T+ + + AC +
Sbjct: 129 IPERNVVSWTTMISAYSNAKLNERALRLLVFMFRDGVMPNMFTFSSVLRACERL 182
Score = 74.7 bits (182), Expect = 1e-11
Identities = 46/151 (30%), Positives = 79/151 (52%), Gaps = 14/151 (9%)
Frame = +2
Query: 71 GNKISINSIARNFASH-------YICSTLSPMNF-------SSLIRSCIDKKSIKNGKSV 208
G+ + NSI FA H ++ ++ F +S++R+C ++ G+ V
Sbjct: 230 GDSVVWNSIIAAFAQHSDGDEALHLYKSMGRAGFRADQSTLTSILRACTSLSLLELGRQV 289
Query: 209 HAQLIVSGSKPDVFTNNHLVTMYLKLNHLGYAQKVFDKMGKRNVISWTTLISSYMQMGLS 388
H ++V D+ +N L+ MY K L A+ +F++M K++VISW+T+I+ Q G S
Sbjct: 290 H--VLVLKFDQDLILSNALLDMYCKCGSLEDAKFIFNRMTKKDVISWSTMIAGLAQNGFS 347
Query: 389 ENALNGLRSMVLDGFNPNTYTYVAAISACTN 481
ALN SM + G PN T++ + AC++
Sbjct: 348 MEALNLFESMKVKGPKPNHITFIGILFACSH 378
Score = 59.7 bits (143), Expect = 4e-07
Identities = 33/112 (29%), Positives = 63/112 (56%)
Frame = +2
Query: 149 FSSLIRSCIDKKSIKNGKSVHAQLIVSGSKPDVFTNNHLVTMYLKLNHLGYAQKVFDKMG 328
FSS++R+C + + + K +H+ ++ G + DVF + L+ +Y KL L A VF +M
Sbjct: 172 FSSVLRAC---ERLSDLKQLHSWIMKVGLESDVFVRSALIDVYSKLGELLEALSVFREMV 228
Query: 329 KRNVISWTTLISSYMQMGLSENALNGLRSMVLDGFNPNTYTYVAAISACTNI 484
+ + W ++I+++ Q + AL+ +SM GF + T + + ACT++
Sbjct: 229 TGDSVVWNSIIAAFAQHSDGDEALHLYKSMGRAGFRADQSTLTSILRACTSL 280
>ref|XP_004488287.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g03540-like isoform X1 [Cicer arietinum]
gi|502086668|ref|XP_004488288.1| PREDICTED:
pentatricopeptide repeat-containing protein
At1g03540-like isoform X2 [Cicer arietinum]
gi|502086671|ref|XP_004488289.1| PREDICTED:
pentatricopeptide repeat-containing protein
At1g03540-like isoform X3 [Cicer arietinum]
Length = 612
Score = 94.7 bits (234), Expect = 1e-17
Identities = 47/119 (39%), Positives = 74/119 (62%), Gaps = 3/119 (2%)
Frame = +2
Query: 131 TLSPMNFSSLIRSCIDKKSIKNGKSVHAQLIVSGSKPDVFTNNHLVTMYLKLN---HLGY 301
+L P+ ++SL+++C+ S +G SVHA +I SG D F N L+T+Y KL+ HL
Sbjct: 49 SLKPVIYASLLQTCVKTSSFLHGTSVHAHVIKSGLHSDRFVGNSLLTLYFKLSPGPHLSQ 108
Query: 302 AQKVFDKMGKRNVISWTTLISSYMQMGLSENALNGLRSMVLDGFNPNTYTYVAAISACT 478
A+K+FD + ++VISWT+LIS Y + GL ++L+ M+ PN +T + I AC+
Sbjct: 109 ARKLFDSLSIKDVISWTSLISGYTRAGLPRHSLSLFNQMLAFPIQPNAFTLSSVIKACS 167
Score = 74.3 bits (181), Expect = 2e-11
Identities = 36/111 (32%), Positives = 60/111 (54%)
Frame = +2
Query: 149 FSSLIRSCIDKKSIKNGKSVHAQLIVSGSKPDVFTNNHLVTMYLKLNHLGYAQKVFDKMG 328
F ++R+C ++ +GK VH + + G DV + LV +Y K + A++VF M
Sbjct: 359 FGIILRACSGLAAVNHGKEVHCRYVRKGGWKDVIIESALVDLYAKCGTVDLARRVFVSME 418
Query: 329 KRNVISWTTLISSYMQMGLSENALNGLRSMVLDGFNPNTYTYVAAISACTN 481
RN+I+W ++IS + Q G AL M+ +G P+ T VA + AC++
Sbjct: 419 VRNLITWNSMISGFAQNGRGVEALALFEDMIKEGIKPDCITLVAVLFACSH 469
Score = 56.6 bits (135), Expect = 3e-06
Identities = 35/113 (30%), Positives = 64/113 (56%), Gaps = 2/113 (1%)
Frame = +2
Query: 152 SSLIRSCIDKKSIKNGKSVHAQLIVSGSKPDVFTNNHLVTMYLKLNHLGYAQKVFDKMGK 331
SS+I++C + + GK+ HA +I G + + L+ MY + A+KVF++M +
Sbjct: 160 SSVIKACSETGDLNLGKTFHAIVISRGFDSNHVVSCSLIDMYGWNRAVEDARKVFEEMPE 219
Query: 332 R-NVISWTTLISSYMQMGLSENALNGLRSM-VLDGFNPNTYTYVAAISACTNI 484
R +V+ WT++ISS+ + + + AL M + G P+ +T+ +SAC N+
Sbjct: 220 RDDVVCWTSIISSFTRNDMFKEALESFLVMHRVCGLIPDGFTFGTLLSACANL 272
>ref|NP_190904.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174119|sp|Q9LFI1.1|PP280_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At3g53360, mitochondrial; Flags: Precursor
gi|6729487|emb|CAB67643.1| putative protein [Arabidopsis
thaliana] gi|332645554|gb|AEE79075.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 768
Score = 94.7 bits (234), Expect = 1e-17
Identities = 43/114 (37%), Positives = 66/114 (57%)
Frame = +2
Query: 143 MNFSSLIRSCIDKKSIKNGKSVHAQLIVSGSKPDVFTNNHLVTMYLKLNHLGYAQKVFDK 322
+ +L+R C++ S+K G VH + +G P+ F N L+ MY K LG A+++FD
Sbjct: 474 ITMGNLLRGCVEISSLKLGSQVHCYSLKTGLAPEQFIKNGLIDMYAKCGSLGQARRIFDS 533
Query: 323 MGKRNVISWTTLISSYMQMGLSENALNGLRSMVLDGFNPNTYTYVAAISACTNI 484
M R+V+SW+TLI Y Q G E AL + M G PN T+V ++AC+++
Sbjct: 534 MDNRDVVSWSTLIVGYAQSGFGEEALILFKEMKSAGIEPNHVTFVGVLTACSHV 587
Score = 79.3 bits (194), Expect = 5e-13
Identities = 36/113 (31%), Positives = 69/113 (61%), Gaps = 1/113 (0%)
Frame = +2
Query: 149 FSSLIRSCIDKKSIKNGKSVHAQLIVSGSKPDVFTNNHLVTMYLKLNHLGYAQKVFDKMG 328
F S+I++C + GK +HAQ+I S + N L+ MY++ N + A +VF +
Sbjct: 171 FGSIIKACASSSDVGLGKQLHAQVIKLESSSHLIAQNALIAMYVRFNQMSDASRVFYGIP 230
Query: 329 KRNVISWTTLISSYMQMGLSENALNGLRSMVLDG-FNPNTYTYVAAISACTNI 484
+++ISW+++I+ + Q+G AL+ L+ M+ G F+PN Y + +++ AC+++
Sbjct: 231 MKDLISWSSIIAGFSQLGFEFEALSHLKEMLSFGVFHPNEYIFGSSLKACSSL 283
Score = 75.5 bits (184), Expect = 7e-12
Identities = 36/111 (32%), Positives = 64/111 (57%)
Frame = +2
Query: 149 FSSLIRSCIDKKSIKNGKSVHAQLIVSGSKPDVFTNNHLVTMYLKLNHLGYAQKVFDKMG 328
+ SLI +C +S+ G+ +H ++ S K D NNH+++MY K L A++VFD M
Sbjct: 70 YISLICACSSSRSLAQGRKIHDHILNSNCKYDTILNNHILSMYGKCGSLRDAREVFDFMP 129
Query: 329 KRNVISWTTLISSYMQMGLSENALNGLRSMVLDGFNPNTYTYVAAISACTN 481
+RN++S+T++I+ Y Q G A+ M+ + P+ + + + I AC +
Sbjct: 130 ERNLVSYTSVITGYSQNGQGAEAIRLYLKMLQEDLVPDQFAFGSIIKACAS 180