BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus22_contig00038169
         (454 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006365930.1| PREDICTED: putative pentatricopeptide repeat...   108   7e-22
ref|XP_004292440.1| PREDICTED: pentatricopeptide repeat-containi...   100   2e-19
gb|EOX97822.1| Pentatricopeptide repeat-containing protein [Theo...    99   8e-19
ref|XP_004248875.1| PREDICTED: putative pentatricopeptide repeat...    99   8e-19
ref|XP_003604017.1| Pentatricopeptide repeat-containing protein ...    86   7e-15
ref|XP_004500755.1| PREDICTED: pentatricopeptide repeat-containi...    84   2e-14
ref|XP_003523507.1| PREDICTED: pentatricopeptide repeat-containi...    79   5e-13
gb|ESW15550.1| hypothetical protein PHAVU_007G081500g [Phaseolus...    78   1e-12
ref|XP_004158417.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...    78   1e-12
ref|XP_004147057.1| PREDICTED: pentatricopeptide repeat-containi...    78   1e-12
ref|XP_006582458.1| PREDICTED: pentatricopeptide repeat-containi...    76   4e-12

>ref|XP_006365930.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g23330-like [Solanum tuberosum]
          Length = 481

 Score =  108 bits (270), Expect = 7e-22
 Identities = 58/131 (44%), Positives = 76/131 (58%), Gaps = 3/131 (2%)
 Frame = -2

Query: 384 MTTQNPLYRAPKFDFIDRFLLRCSETRNLKVIKKFHAHLLRTGLLFVTPSIQTKVIFSYI 205
           M TQ+   R P    I      C  ++NL+ IK F AHL+RTGL+F++P+ Q K+  S  
Sbjct: 5   MFTQSQFERGPISSSITNIFHHCCNSKNLRAIKVFQAHLIRTGLIFISPNFQFKLATSLP 64

Query: 204 KNNWG---VXXXXXXXXXXXXXXXXXSVISHFSQNGYHFLALRTFSFMHFNGVEIDSYAL 34
            NN                       S++SHFSQNG+H LALRTFSFMHF G++IDSY L
Sbjct: 65  NNNNNHLQTLTNFFKFLKPRNPLLLNSILSHFSQNGFHSLALRTFSFMHFGGIDIDSYTL 124

Query: 33  CSALTSSSGDK 1
           CS++T+SS  K
Sbjct: 125 CSSITASSAVK 135


>ref|XP_004292440.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g14330-like [Fragaria vesca subsp. vesca]
          Length = 489

 Score =  100 bits (250), Expect = 2e-19
 Identities = 55/130 (42%), Positives = 75/130 (57%), Gaps = 4/130 (3%)
 Frame = -2

Query: 387 LMTTQNPLYRAPKFDFIDRFLLRCSETRNLKVIKKFHAHLLRTGLLFVTPSIQTKVIFSY 208
           LM+   PLYR    DFI R++ R S+TRN   +K  HAHLL + LLF +P    ++I SY
Sbjct: 13  LMSNFFPLYRTQSSDFITRYIHRISQTRNHTALKMLHAHLLTSALLFTSPHFHAELIISY 72

Query: 207 IK----NNWGVXXXXXXXXXXXXXXXXXSVISHFSQNGYHFLALRTFSFMHFNGVEIDSY 40
            K    +N                     +IS   +NG++FLAL+T SFMH +GV ID+Y
Sbjct: 73  AKCLPQHNLHTLTNFFKCMKPNSELPFNVLISDLCRNGFNFLALKTLSFMHCSGVSIDTY 132

Query: 39  ALCSALTSSS 10
           ALCS+LT++S
Sbjct: 133 ALCSSLTAAS 142


>gb|EOX97822.1| Pentatricopeptide repeat-containing protein [Theobroma cacao]
          Length = 470

 Score = 98.6 bits (244), Expect = 8e-19
 Identities = 52/118 (44%), Positives = 73/118 (61%), Gaps = 5/118 (4%)
 Frame = -2

Query: 348 FDFIDRFLLRCSETRNLKVIKKFHAHLLRTGLLFVTPSIQTKVIFSYI-----KNNWGVX 184
           F+ I + L   S+T NL   +  HA LL+ GLLFV+P+IQ+K+IF+Y+     K N  + 
Sbjct: 3   FESITKVLQILSQTTNLLATEILHADLLKKGLLFVSPNIQSKLIFTYVTCLGGKPNLKIL 62

Query: 183 XXXXXXXXXXXXXXXXSVISHFSQNGYHFLALRTFSFMHFNGVEIDSYALCSALTSSS 10
                            +IS FS+NG+ F AL+TFSFMHFNG+ +D+YALC +LT+SS
Sbjct: 63  TNCFKSINPKNPVPFNVIISDFSKNGFAFFALKTFSFMHFNGISLDTYALCGSLTASS 120


>ref|XP_004248875.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g23330-like [Solanum lycopersicum]
          Length = 599

 Score = 98.6 bits (244), Expect = 8e-19
 Identities = 56/141 (39%), Positives = 75/141 (53%), Gaps = 4/141 (2%)
 Frame = -2

Query: 411 QTLGVLVPLMTTQNPLYRAPKFDFIDRFLLRCSETRNLKVIKKFHAHLLRTGLLFVTPSI 232
           QT+  + P+  T       P    I      C  ++NL+ IK F AHL+RTGL+F++ + 
Sbjct: 119 QTVEKMKPVFET------GPNSSSITNIFHHCCNSKNLRAIKVFQAHLIRTGLIFISTNF 172

Query: 231 QTKVIFSYIKNNWGVXXXXXXXXXXXXXXXXXS----VISHFSQNGYHFLALRTFSFMHF 64
           Q K+  S   NN                         ++SHFSQNG+H LALRTFSFMHF
Sbjct: 173 QFKLATSLPNNNKNNHVQNFTNFFKFLKPTNPLLLNSILSHFSQNGFHSLALRTFSFMHF 232

Query: 63  NGVEIDSYALCSALTSSSGDK 1
            G+ IDSY LCS++T+SS  K
Sbjct: 233 GGIGIDSYTLCSSITASSAVK 253


>ref|XP_003604017.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355493065|gb|AES74268.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 742

 Score = 85.5 bits (210), Expect = 7e-15
 Identities = 48/117 (41%), Positives = 64/117 (54%), Gaps = 5/117 (4%)
 Frame = -2

Query: 345 DFIDRFLLRCSETRNLKVIKKFHAHLLRTGLLFVTPSIQTKVIFSYIK-----NNWGVXX 181
           + I ++L +C  T NL  IKK HAHLL  G LF+   + T++I +Y       N   +  
Sbjct: 192 NLIIQYLHQCQVTNNLSSIKKLHAHLLTKGTLFILHDLHTQLISTYTSFFPSNNLQTLTN 251

Query: 180 XXXXXXXXXXXXXXXSVISHFSQNGYHFLALRTFSFMHFNGVEIDSYALCSALTSSS 10
                           +ISHF + G+ FLAL TFSFMH N V +D+YALCS LT+SS
Sbjct: 252 SFFKCMNSTNPLHFNVIISHFCRKGFPFLALTTFSFMHTNHVPLDTYALCSTLTASS 308


>ref|XP_004500755.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g12770-like [Cicer arietinum]
          Length = 458

 Score = 84.0 bits (206), Expect = 2e-14
 Identities = 47/115 (40%), Positives = 61/115 (53%), Gaps = 5/115 (4%)
 Frame = -2

Query: 339 IDRFLLRCSETRNLKVIKKFHAHLLRTGLLFVTPSIQTKVIFSYIK-----NNWGVXXXX 175
           I +FL +C  T NL  IKK H HLL  G LF+   I T++I +Y       N   +    
Sbjct: 18  IIQFLHKCHVTNNLSSIKKLHGHLLTQGTLFILHDIHTQLIATYTSCLPNNNLQTLVNTF 77

Query: 174 XXXXXXXXXXXXXSVISHFSQNGYHFLALRTFSFMHFNGVEIDSYALCSALTSSS 10
                         +ISHF   G+ FLAL +FSFMH N + +D+YALCS LT+SS
Sbjct: 78  FKCMNSTNPLHFNLIISHFCHKGFPFLALASFSFMHTNAIPLDTYALCSTLTASS 132


>ref|XP_003523507.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g12770-like [Glycine max]
          Length = 472

 Score = 79.3 bits (194), Expect = 5e-13
 Identities = 45/111 (40%), Positives = 64/111 (57%), Gaps = 4/111 (3%)
 Frame = -2

Query: 330 FLLRCSETRNLKVIKKFHAHLLRTGLLFVTPSIQTKVIFSYI----KNNWGVXXXXXXXX 163
           FL +   + N+  IKK HA LLRTG+LF++ ++ T++I +Y      NN           
Sbjct: 9   FLHQSRGSGNVSAIKKLHAQLLRTGMLFLSHNLHTQLIATYAACLPNNNLQSLNNFFKCM 68

Query: 162 XXXXXXXXXSVISHFSQNGYHFLALRTFSFMHFNGVEIDSYALCSALTSSS 10
                    ++IS F + G  FLAL +FSF+H NGV +D+YALCS LT+SS
Sbjct: 69  NSTNPLHFNAIISDFCRKGLPFLALASFSFVHANGVPLDTYALCSTLTASS 119


>gb|ESW15550.1| hypothetical protein PHAVU_007G081500g [Phaseolus vulgaris]
          Length = 470

 Score = 78.2 bits (191), Expect = 1e-12
 Identities = 44/114 (38%), Positives = 64/114 (56%), Gaps = 4/114 (3%)
 Frame = -2

Query: 339 IDRFLLRCSETRNLKVIKKFHAHLLRTGLLFVTPSIQTKVIFSYI----KNNWGVXXXXX 172
           I   L +C  + +   IKK HA LLRTG++F++  + T++I +Y       N  +     
Sbjct: 6   IFELLHQCRVSADDSAIKKLHAQLLRTGMIFLSHHLHTQLIATYAACLPNTNLHLLKNFF 65

Query: 171 XXXXXXXXXXXXSVISHFSQNGYHFLALRTFSFMHFNGVEIDSYALCSALTSSS 10
                       ++IS F + G+ FLAL +FSFMH NGV +D+YALCS LT+SS
Sbjct: 66  KCMNSTNPLHFNAIISDFCRKGFPFLALASFSFMHTNGVPLDTYALCSTLTASS 119


>ref|XP_004158417.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At4g18750, chloroplastic-like [Cucumis sativus]
          Length = 497

 Score = 78.2 bits (191), Expect = 1e-12
 Identities = 48/116 (41%), Positives = 62/116 (53%), Gaps = 4/116 (3%)
 Frame = -2

Query: 345 DFIDRFLLRCSETRNLKVIKKFHAHLLRTGLLFVTPSIQTKVIFSY--IKNNWGVXXXXX 172
           D    F    S+ +NLK IKK HAHLLRT   F +P++ +K+I SY  I  N+       
Sbjct: 35  DSFASFFHHSSQFKNLKTIKKIHAHLLRTHFQFFSPNLHSKLILSYSQIIPNFDAKSLNG 94

Query: 171 XXXXXXXXXXXXS--VISHFSQNGYHFLALRTFSFMHFNGVEIDSYALCSALTSSS 10
                          +IS FS++G+   AL  FSFMH NGV ID+YALCS+L   S
Sbjct: 95  IFQCIIPRTSLTFNVMISDFSRHGFQDFALMGFSFMHSNGVPIDTYALCSSLNGCS 150


>ref|XP_004147057.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
           chloroplastic-like [Cucumis sativus]
          Length = 469

 Score = 78.2 bits (191), Expect = 1e-12
 Identities = 48/116 (41%), Positives = 62/116 (53%), Gaps = 4/116 (3%)
 Frame = -2

Query: 345 DFIDRFLLRCSETRNLKVIKKFHAHLLRTGLLFVTPSIQTKVIFSY--IKNNWGVXXXXX 172
           D    F    S+ +NLK IKK HAHLLRT   F +P++ +K+I SY  I  N+       
Sbjct: 7   DSFASFFHHSSQFKNLKTIKKIHAHLLRTHFQFFSPNLHSKLILSYSQIIPNFDAKSLNG 66

Query: 171 XXXXXXXXXXXXS--VISHFSQNGYHFLALRTFSFMHFNGVEIDSYALCSALTSSS 10
                          +IS FS++G+   AL  FSFMH NGV ID+YALCS+L   S
Sbjct: 67  IFQCIIPRTSLTFNVMISDFSRHGFQDFALMGFSFMHSNGVPIDTYALCSSLNGCS 122


>ref|XP_006582458.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g12770-like [Glycine max]
          Length = 458

 Score = 76.3 bits (186), Expect = 4e-12
 Identities = 45/117 (38%), Positives = 65/117 (55%), Gaps = 4/117 (3%)
 Frame = -2

Query: 348 FDFIDRFLLRCSETRNLKVIKKFHAHLLRTGLLFVTPSIQTKVIFSYI----KNNWGVXX 181
           F+F+ +F +    + N+  IKK HA LLR G+LF++  + T++I +Y      N      
Sbjct: 7   FEFLHQFRV----SGNVSAIKKLHAQLLRRGMLFLSHHLHTQLIATYAACLPNNTRQSLN 62

Query: 180 XXXXXXXXXXXXXXXSVISHFSQNGYHFLALRTFSFMHFNGVEIDSYALCSALTSSS 10
                          + IS F + G+ FLAL +FSFMH NGV +D+YALCS LT+SS
Sbjct: 63  NFFKCMNSTNPLHFNATISDFCRKGFPFLALSSFSFMHTNGVPLDTYALCSTLTASS 119