BLASTX nr result
ID: Catharanthus22_contig00038067
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus22_contig00038067
(323 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN73272.1| hypothetical protein VITISV_013115 [Vitis vinifera] 94 2e-17
emb|CAN83015.1| hypothetical protein VITISV_041694 [Vitis vinifera] 93 3e-17
emb|CAN80919.1| hypothetical protein VITISV_002640 [Vitis vinifera] 93 3e-17
emb|CAN76645.1| hypothetical protein VITISV_004685 [Vitis vinifera] 93 4e-17
emb|CAN61658.1| hypothetical protein VITISV_040310 [Vitis vinifera] 92 6e-17
emb|CAN69804.1| hypothetical protein VITISV_017631 [Vitis vinifera] 91 2e-16
emb|CAN82171.1| hypothetical protein VITISV_040546 [Vitis vinifera] 90 3e-16
gb|AAD24600.1| putative retroelement pol polyprotein [Arabidopsi... 90 4e-16
gb|AAB87099.1| putative retroelement pol polyprotein [Arabidopsi... 88 1e-15
gb|AAM98191.1| unknown protein [Arabidopsis thaliana] gi|3860380... 88 1e-15
dbj|BAB10743.1| retroelement pol polyprotein-like [Arabidopsis t... 86 4e-15
emb|CAA18107.1| LTR retrotransposon like protein [Arabidopsis th... 86 4e-15
gb|AAG50751.1|AC079733_19 polyprotein, putative [Arabidopsis tha... 86 4e-15
emb|CAN82073.1| hypothetical protein VITISV_036538 [Vitis vinifera] 82 1e-13
emb|CAN67762.1| hypothetical protein VITISV_040650 [Vitis vinifera] 81 1e-13
gb|AAG09097.1|AC009323_8 Putative retroelement polyprotein [Arab... 80 3e-13
gb|AAG51258.1|AC025782_3 Ty1/copia-element polyprotein [Arabidop... 79 5e-13
dbj|BAA97287.1| retroelement pol polyprotein-like [Arabidopsis t... 78 1e-12
gb|AAC67205.1| putative retroelement pol polyprotein [Arabidopsi... 78 1e-12
emb|CAN60829.1| hypothetical protein VITISV_012059 [Vitis vinifera] 77 2e-12
>emb|CAN73272.1| hypothetical protein VITISV_013115 [Vitis vinifera]
Length = 1178
Score = 93.6 bits (231), Expect = 2e-17
Identities = 45/76 (59%), Positives = 54/76 (71%)
Frame = +1
Query: 91 LAEVLGI*HFLAIAVTKGWKTHQMDVHSTFLHRDLAEEVYMKLPLGFHTNSPNPVCLHRK 270
+A++ + FLAIA +K W+ HQMDVH+ FLH DL EEVYMKLP GF + PN VC RK
Sbjct: 753 VAKMTTVRAFLAIAASKNWELHQMDVHNAFLHGDLEEEVYMKLPPGFERSDPNLVCRLRK 812
Query: 271 PLYGLR*DS*CWFSKL 318
LYGL+ CWFSKL
Sbjct: 813 SLYGLKQAPRCWFSKL 828
>emb|CAN83015.1| hypothetical protein VITISV_041694 [Vitis vinifera]
Length = 1099
Score = 93.2 bits (230), Expect = 3e-17
Identities = 44/67 (65%), Positives = 49/67 (73%)
Frame = +1
Query: 118 FLAIAVTKGWKTHQMDVHSTFLHRDLAEEVYMKLPLGFHTNSPNPVCLHRKPLYGLR*DS 297
FLAIA +K W+ HQMDVH+ FLH DL EEVYMKLP GF + PN VC RK LYGL+
Sbjct: 683 FLAIAASKNWELHQMDVHNAFLHGDLEEEVYMKLPPGFERSDPNLVCRLRKSLYGLKQAP 742
Query: 298 *CWFSKL 318
CWFSKL
Sbjct: 743 RCWFSKL 749
>emb|CAN80919.1| hypothetical protein VITISV_002640 [Vitis vinifera]
Length = 1450
Score = 93.2 bits (230), Expect = 3e-17
Identities = 44/76 (57%), Positives = 55/76 (72%)
Frame = +1
Query: 91 LAEVLGI*HFLAIAVTKGWKTHQMDVHSTFLHRDLAEEVYMKLPLGFHTNSPNPVCLHRK 270
+A++ + FLAIA +K W+ HQMDVH+ FLH DL EEVYMKLP GF ++ PN VC RK
Sbjct: 1036 VAKMTTVRAFLAIAASKNWELHQMDVHNAFLHGDLEEEVYMKLPPGFESSDPNLVCRLRK 1095
Query: 271 PLYGLR*DS*CWFSKL 318
LYGL+ CWF+KL
Sbjct: 1096 SLYGLKQAPRCWFAKL 1111
>emb|CAN76645.1| hypothetical protein VITISV_004685 [Vitis vinifera]
Length = 1196
Score = 92.8 bits (229), Expect = 4e-17
Identities = 44/76 (57%), Positives = 54/76 (71%)
Frame = +1
Query: 91 LAEVLGI*HFLAIAVTKGWKTHQMDVHSTFLHRDLAEEVYMKLPLGFHTNSPNPVCLHRK 270
+A++ + FLAIA +K W+ HQMDVH+ FLH DL EEVYMKLP GF + PN VC RK
Sbjct: 880 IAKMTTVRAFLAIAASKNWELHQMDVHNAFLHGDLEEEVYMKLPPGFESXDPNLVCRLRK 939
Query: 271 PLYGLR*DS*CWFSKL 318
LYGL+ CWF+KL
Sbjct: 940 SLYGLKQAPRCWFAKL 955
>emb|CAN61658.1| hypothetical protein VITISV_040310 [Vitis vinifera]
Length = 1461
Score = 92.4 bits (228), Expect = 6e-17
Identities = 44/76 (57%), Positives = 54/76 (71%)
Frame = +1
Query: 91 LAEVLGI*HFLAIAVTKGWKTHQMDVHSTFLHRDLAEEVYMKLPLGFHTNSPNPVCLHRK 270
+A++ + FLAIA +K W+ HQMDVH+ FLH DL EEVYMKLP GF + PN VC RK
Sbjct: 1036 VAKMTTVRTFLAIAASKNWELHQMDVHNAFLHGDLEEEVYMKLPPGFERSDPNLVCRLRK 1095
Query: 271 PLYGLR*DS*CWFSKL 318
LYGL+ CWF+KL
Sbjct: 1096 SLYGLKQAPRCWFAKL 1111
>emb|CAN69804.1| hypothetical protein VITISV_017631 [Vitis vinifera]
Length = 1191
Score = 90.9 bits (224), Expect = 2e-16
Identities = 43/76 (56%), Positives = 54/76 (71%)
Frame = +1
Query: 91 LAEVLGI*HFLAIAVTKGWKTHQMDVHSTFLHRDLAEEVYMKLPLGFHTNSPNPVCLHRK 270
+A++ + FLAIA +K W+ HQMDVH+ F H DL EEVYMKLP GF ++ PN VC RK
Sbjct: 748 VAKMTTVRAFLAIAASKNWELHQMDVHNAFSHGDLEEEVYMKLPPGFESSDPNLVCRLRK 807
Query: 271 PLYGLR*DS*CWFSKL 318
LYGL+ CWF+KL
Sbjct: 808 SLYGLKQAPRCWFAKL 823
>emb|CAN82171.1| hypothetical protein VITISV_040546 [Vitis vinifera]
Length = 1129
Score = 90.1 bits (222), Expect = 3e-16
Identities = 43/76 (56%), Positives = 54/76 (71%)
Frame = +1
Query: 91 LAEVLGI*HFLAIAVTKGWKTHQMDVHSTFLHRDLAEEVYMKLPLGFHTNSPNPVCLHRK 270
+A++ + FLAIA +K W+ HQMDVH+ FLH DL EEVYMKLP GF ++ PN VC K
Sbjct: 704 VAKMTTVRAFLAIAASKNWELHQMDVHNAFLHGDLEEEVYMKLPPGFESSDPNLVCRLWK 763
Query: 271 PLYGLR*DS*CWFSKL 318
LYGL+ CWF+KL
Sbjct: 764 SLYGLKQAPRCWFAKL 779
>gb|AAD24600.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1333
Score = 89.7 bits (221), Expect = 4e-16
Identities = 45/80 (56%), Positives = 54/80 (67%)
Frame = +1
Query: 79 APVNLAEVLGI*HFLAIAVTKGWKTHQMDVHSTFLHRDLAEEVYMKLPLGFHTNSPNPVC 258
APV A++ + FL +AV + W+ HQMDVH+ FLH DL EEVYMKLP GF + PN VC
Sbjct: 906 APV--AKMATVRLFLDVAVKRNWEIHQMDVHNAFLHGDLREEVYMKLPPGFEASHPNKVC 963
Query: 259 LHRKPLYGLR*DS*CWFSKL 318
RK LYGL+ CWF KL
Sbjct: 964 RLRKALYGLKQAPRCWFEKL 983
>gb|AAB87099.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1496
Score = 88.2 bits (217), Expect = 1e-15
Identities = 44/80 (55%), Positives = 54/80 (67%)
Frame = +1
Query: 79 APVNLAEVLGI*HFLAIAVTKGWKTHQMDVHSTFLHRDLAEEVYMKLPLGFHTNSPNPVC 258
APV A++ + LA+A K W+ HQMDVH+ FLH DL EEVYM+LP GF + P+ VC
Sbjct: 1069 APV--AKLTTVRTILAVAAAKDWEVHQMDVHNAFLHGDLEEEVYMRLPPGFKCSDPSKVC 1126
Query: 259 LHRKPLYGLR*DS*CWFSKL 318
RK LYGL+ CWFSKL
Sbjct: 1127 RLRKSLYGLKQAPRCWFSKL 1146
>gb|AAM98191.1| unknown protein [Arabidopsis thaliana] gi|38603804|gb|AAR24647.1|
At2g23330 [Arabidopsis thaliana]
gi|110742535|dbj|BAE99183.1| putative retroelement pol
polyprotein [Arabidopsis thaliana]
Length = 776
Score = 88.2 bits (217), Expect = 1e-15
Identities = 44/80 (55%), Positives = 54/80 (67%)
Frame = +1
Query: 79 APVNLAEVLGI*HFLAIAVTKGWKTHQMDVHSTFLHRDLAEEVYMKLPLGFHTNSPNPVC 258
APV A++ + LA+A K W+ HQMDVH+ FLH DL EEVYM+LP GF + P+ VC
Sbjct: 349 APV--AKLTTVRTILAVAAAKDWEVHQMDVHNAFLHGDLEEEVYMRLPPGFKCSDPSKVC 406
Query: 259 LHRKPLYGLR*DS*CWFSKL 318
RK LYGL+ CWFSKL
Sbjct: 407 RLRKSLYGLKQAPRCWFSKL 426
>dbj|BAB10743.1| retroelement pol polyprotein-like [Arabidopsis thaliana]
Length = 1109
Score = 86.3 bits (212), Expect = 4e-15
Identities = 39/67 (58%), Positives = 45/67 (67%)
Frame = +1
Query: 118 FLAIAVTKGWKTHQMDVHSTFLHRDLAEEVYMKLPLGFHTNSPNPVCLHRKPLYGLR*DS 297
FL +A + W HQMDVH+ FLH DL EEVYMKLP GF + P+ VC K LYGL+
Sbjct: 693 FLGVAAARDWHVHQMDVHNAFLHGDLKEEVYMKLPQGFQCDDPSKVCRLHKSLYGLKQAP 752
Query: 298 *CWFSKL 318
CWFSKL
Sbjct: 753 RCWFSKL 759
>emb|CAA18107.1| LTR retrotransposon like protein [Arabidopsis thaliana]
gi|7269049|emb|CAB79159.1| LTR retrotransposon like
protein [Arabidopsis thaliana]
Length = 1109
Score = 86.3 bits (212), Expect = 4e-15
Identities = 39/67 (58%), Positives = 45/67 (67%)
Frame = +1
Query: 118 FLAIAVTKGWKTHQMDVHSTFLHRDLAEEVYMKLPLGFHTNSPNPVCLHRKPLYGLR*DS 297
FL +A + W HQMDVH+ FLH DL EEVYMKLP GF + P+ VC K LYGL+
Sbjct: 693 FLGVAAARDWHVHQMDVHNAFLHGDLKEEVYMKLPQGFQCDDPSKVCRLHKSLYGLKQAP 752
Query: 298 *CWFSKL 318
CWFSKL
Sbjct: 753 RCWFSKL 759
>gb|AAG50751.1|AC079733_19 polyprotein, putative [Arabidopsis thaliana]
Length = 1468
Score = 86.3 bits (212), Expect = 4e-15
Identities = 39/67 (58%), Positives = 45/67 (67%)
Frame = +1
Query: 118 FLAIAVTKGWKTHQMDVHSTFLHRDLAEEVYMKLPLGFHTNSPNPVCLHRKPLYGLR*DS 297
FL +A + W HQMDVH+ FLH DL EEVYMKLP GF + P+ VC K LYGL+
Sbjct: 1052 FLGVAAARDWHVHQMDVHNAFLHGDLKEEVYMKLPQGFQCDDPSKVCRLHKSLYGLKQAP 1111
Query: 298 *CWFSKL 318
CWFSKL
Sbjct: 1112 RCWFSKL 1118
>emb|CAN82073.1| hypothetical protein VITISV_036538 [Vitis vinifera]
Length = 1157
Score = 81.6 bits (200), Expect = 1e-13
Identities = 38/75 (50%), Positives = 52/75 (69%)
Frame = +1
Query: 94 AEVLGI*HFLAIAVTKGWKTHQMDVHSTFLHRDLAEEVYMKLPLGFHTNSPNPVCLHRKP 273
A+++ + FLA+ KGW+ HQMDVH+ FLH +L EEVYM++ GF + +P VC RK
Sbjct: 778 AKMVTVQTFLAVVAMKGWELHQMDVHNAFLHGELDEEVYMQMSPGFASPTPGKVCGLRKS 837
Query: 274 LYGLR*DS*CWFSKL 318
LYGL+ CWF+KL
Sbjct: 838 LYGLQQAPKCWFAKL 852
>emb|CAN67762.1| hypothetical protein VITISV_040650 [Vitis vinifera]
Length = 1316
Score = 81.3 bits (199), Expect = 1e-13
Identities = 40/76 (52%), Positives = 51/76 (67%)
Frame = +1
Query: 91 LAEVLGI*HFLAIAVTKGWKTHQMDVHSTFLHRDLAEEVYMKLPLGFHTNSPNPVCLHRK 270
+A++ + FLA+ V K W+ HQMDV++ FLH DL EEVYMKLP GF N VC +K
Sbjct: 891 VAKMTSVRCFLAVXVAKRWELHQMDVNNAFLHGDLEEEVYMKLPEGFKATGKNKVCKLQK 950
Query: 271 PLYGLR*DS*CWFSKL 318
LYGL+ S WF+KL
Sbjct: 951 SLYGLKQASRQWFAKL 966
>gb|AAG09097.1|AC009323_8 Putative retroelement polyprotein [Arabidopsis thaliana]
Length = 1486
Score = 80.1 bits (196), Expect = 3e-13
Identities = 41/80 (51%), Positives = 51/80 (63%)
Frame = +1
Query: 79 APVNLAEVLGI*HFLAIAVTKGWKTHQMDVHSTFLHRDLAEEVYMKLPLGFHTNSPNPVC 258
APV A+++ + FL V+ W+ HQMDVH+ FLH DL EEVYM+ P GF T VC
Sbjct: 1059 APV--AKMVTVRAFLQQVVSLDWEVHQMDVHNAFLHGDLDEEVYMQFPPGFRTGDKTKVC 1116
Query: 259 LHRKPLYGLR*DS*CWFSKL 318
RK LYGL+ CWF+KL
Sbjct: 1117 RLRKSLYGLKQAPRCWFAKL 1136
>gb|AAG51258.1|AC025782_3 Ty1/copia-element polyprotein [Arabidopsis thaliana]
Length = 1152
Score = 79.3 bits (194), Expect = 5e-13
Identities = 35/66 (53%), Positives = 44/66 (66%)
Frame = +1
Query: 121 LAIAVTKGWKTHQMDVHSTFLHRDLAEEVYMKLPLGFHTNSPNPVCLHRKPLYGLR*DS* 300
L +A K W+ HQMDVH+ FLH DL E++YMK P GF T P+ VC +K +YGL+
Sbjct: 1029 LDVAAAKDWELHQMDVHNAFLHGDLKEDIYMKPPPGFKTTDPSLVCKLKKSIYGLKQAPR 1088
Query: 301 CWFSKL 318
CWF KL
Sbjct: 1089 CWFEKL 1094
>dbj|BAA97287.1| retroelement pol polyprotein-like [Arabidopsis thaliana]
Length = 1491
Score = 78.2 bits (191), Expect = 1e-12
Identities = 36/66 (54%), Positives = 43/66 (65%)
Frame = +1
Query: 121 LAIAVTKGWKTHQMDVHSTFLHRDLAEEVYMKLPLGFHTNSPNPVCLHRKPLYGLR*DS* 300
L + W+ +QMDVH+ FLH DL EEVYMKLP GF + P+ VC RK LYGL+
Sbjct: 1076 LRLVAANQWEVYQMDVHNAFLHGDLEEEVYMKLPPGFRHSHPDKVCRLRKSLYGLKQAPR 1135
Query: 301 CWFSKL 318
CWF KL
Sbjct: 1136 CWFKKL 1141
>gb|AAC67205.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1413
Score = 78.2 bits (191), Expect = 1e-12
Identities = 36/66 (54%), Positives = 43/66 (65%)
Frame = +1
Query: 121 LAIAVTKGWKTHQMDVHSTFLHRDLAEEVYMKLPLGFHTNSPNPVCLHRKPLYGLR*DS* 300
L + W+ +QMDVH+ FLH DL EEVYMKLP GF + P+ VC RK LYGL+
Sbjct: 1076 LRLVAANQWEVYQMDVHNAFLHGDLEEEVYMKLPPGFRHSHPDKVCRLRKSLYGLKQAPR 1135
Query: 301 CWFSKL 318
CWF KL
Sbjct: 1136 CWFKKL 1141
>emb|CAN60829.1| hypothetical protein VITISV_012059 [Vitis vinifera]
Length = 1128
Score = 77.0 bits (188), Expect = 2e-12
Identities = 39/66 (59%), Positives = 46/66 (69%)
Frame = +1
Query: 121 LAIAVTKGWKTHQMDVHSTFLHRDLAEEVYMKLPLGFHTNSPNPVCLHRKPLYGLR*DS* 300
LAIA K W HQ+DV++ FLH DL EEVYM+LPLGF T + VC +K LYGLR S
Sbjct: 710 LAIAAAKQWYLHQLDVNNAFLHGDLNEEVYMQLPLGFSTPNDPRVCKLKKSLYGLRQASR 769
Query: 301 CWFSKL 318
W+SKL
Sbjct: 770 QWYSKL 775