BLASTX nr result

ID: Catharanthus22_contig00037999 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus22_contig00037999
         (460 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002317857.1| hypothetical protein POPTR_0012s00280g [Popu...    55   3e-08
ref|XP_006382338.1| hypothetical protein POPTR_0005s01170g, part...    47   2e-07
gb|EMJ10142.1| hypothetical protein PRUPE_ppb015526mg, partial [...    48   8e-06

>ref|XP_002317857.1| hypothetical protein POPTR_0012s00280g [Populus trichocarpa]
           gi|222858530|gb|EEE96077.1| hypothetical protein
           POPTR_0012s00280g [Populus trichocarpa]
          Length = 288

 Score = 54.7 bits (130), Expect(2) = 3e-08
 Identities = 28/76 (36%), Positives = 39/76 (51%)
 Frame = -1

Query: 256 HDFFLAPFQLEEDFTKIIVGSL*FVKGQYITTRLWQP*FNPVTERTTITIVWARLPDLPL 77
           H FF+  F  E D  K++ G    +   Y+T R W P F   T +   T+VWAR+PDL +
Sbjct: 140 HGFFMVKFNQEMDRMKVMNGGPWMILDHYLTVRTWSPSFVSTTAKIDWTLVWARIPDLNV 199

Query: 76  ISTTEISSYGLATR*G 29
           +   EI    LA+  G
Sbjct: 200 VFYDEIFLLALASALG 215



 Score = 28.5 bits (62), Expect(2) = 3e-08
 Identities = 12/39 (30%), Positives = 23/39 (58%)
 Frame = -2

Query: 375 WVHSIILKPYGKSISYSYLDYKLCQT*KLVEFMNLIDMG 259
           W  S+I+K  GK+I Y+ ++ +L +     +   L+D+G
Sbjct: 101 WCDSLIVKLLGKNIGYTQMNIRLKKVWNFAKGFELMDVG 139


>ref|XP_006382338.1| hypothetical protein POPTR_0005s01170g, partial [Populus
           trichocarpa] gi|550337696|gb|ERP60135.1| hypothetical
           protein POPTR_0005s01170g, partial [Populus trichocarpa]
          Length = 270

 Score = 46.6 bits (109), Expect(2) = 2e-07
 Identities = 24/60 (40%), Positives = 30/60 (50%)
 Frame = -1

Query: 256 HDFFLAPFQLEEDFTKIIVGSL*FVKGQYITTRLWQP*FNPVTERTTITIVWARLPDLPL 77
           +DFFLA F  +ED    + G    V   Y+T R W P F+P         VW RLPDL +
Sbjct: 112 NDFFLARFSNKEDRESAMSGGPWMVADHYLTMRSWHPNFDPNVATIEKVAVWIRLPDLAM 171



 Score = 34.3 bits (77), Expect(2) = 2e-07
 Identities = 17/53 (32%), Positives = 31/53 (58%)
 Frame = -2

Query: 417 VKLSRDNKLLIRSVWVHSIILKPYGKSISYSYLDYKLCQT*KLVEFMNLIDMG 259
           ++L  + K  IR  W  ++I+K  G  +SY++L  +L    K+   +NL+D+G
Sbjct: 59  IRLFMEEKKRIREPWRQTLIIKVLGCRVSYTFLLKRLQIIWKIQGDLNLVDLG 111


>gb|EMJ10142.1| hypothetical protein PRUPE_ppb015526mg, partial [Prunus persica]
          Length = 594

 Score = 48.1 bits (113), Expect(2) = 8e-06
 Identities = 20/60 (33%), Positives = 34/60 (56%)
 Frame = -1

Query: 256 HDFFLAPFQLEEDFTKIIVGSL*FVKGQYITTRLWQP*FNPVTERTTITIVWARLPDLPL 77
           +D+++  F+LEED   ++ G    + GQY+  + W+P F P T + T   VW R+  + L
Sbjct: 212 NDYYVVKFELEEDLNFVLTGGPWIIAGQYLVMQKWRPGFCPATAQITRMAVWLRVSAIQL 271



 Score = 26.9 bits (58), Expect(2) = 8e-06
 Identities = 14/38 (36%), Positives = 23/38 (60%)
 Frame = -2

Query: 375 WVHSIILKPYGKSISYSYLDYKLCQT*KLVEFMNLIDM 262
           W +++I+K  G+S +Y+YL  +L Q   L     LID+
Sbjct: 173 WKNALIIKLLGRSHTYNYLRDRLNQKWSLRGEWKLIDL 210


Top