BLASTX nr result
ID: Catharanthus22_contig00037924
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus22_contig00037924
(460 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006469117.1| PREDICTED: putative ribonuclease H protein A... 78 1e-12
sp|P0C2F6.1|RNHX1_ARATH RecName: Full=Putative ribonuclease H pr... 72 2e-11
ref|XP_006480844.1| PREDICTED: putative ribonuclease H protein A... 73 3e-11
gb|AAC63844.1| putative non-LTR retroelement reverse transcripta... 73 4e-11
ref|XP_004289445.1| PREDICTED: putative ribonuclease H protein A... 72 1e-10
emb|CAB10337.1| reverse transcriptase like protein [Arabidopsis ... 72 1e-10
gb|EOY07997.1| Uncharacterized protein TCM_022315 [Theobroma cacao] 71 1e-10
gb|EOY17515.1| Uncharacterized protein TCM_042331 [Theobroma cacao] 71 2e-10
gb|AAD37021.1| putative non-LTR retrolelement reverse transcript... 71 2e-10
emb|CCA65997.1| hypothetical protein [Beta vulgaris subsp. vulga... 70 2e-10
emb|CCA65974.1| hypothetical protein [Beta vulgaris subsp. vulga... 70 2e-10
gb|ABW81175.1| non-LTR retrotransposon transposase [Arabidopsis ... 70 3e-10
gb|EMJ28309.1| hypothetical protein PRUPE_ppa026753mg, partial [... 70 4e-10
emb|CCA66140.1| hypothetical protein [Beta vulgaris subsp. vulga... 70 4e-10
ref|XP_006490008.1| PREDICTED: uncharacterized protein LOC102624... 69 5e-10
ref|XP_004306074.1| PREDICTED: putative ribonuclease H protein A... 69 6e-10
emb|CCA66178.1| hypothetical protein [Beta vulgaris subsp. vulga... 69 6e-10
emb|CCA66153.1| hypothetical protein [Beta vulgaris subsp. vulga... 67 1e-09
gb|EOY12746.1| Uncharacterized protein TCM_031281 [Theobroma cacao] 68 1e-09
emb|CAN82685.1| hypothetical protein VITISV_000485 [Vitis vinifera] 66 2e-09
>ref|XP_006469117.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Citrus
sinensis]
Length = 491
Score = 78.2 bits (191), Expect = 1e-12
Identities = 38/78 (48%), Positives = 51/78 (65%)
Frame = -1
Query: 415 AKYLSLAGRVTLFQSVISSIPVNLMQVSILPKAITNSLENITRKFLWCSTNEKWKLRLIT 236
A LSLAGR+TL QSV+ +IPV MQ S +P + N + I ++F+W +NE K+ LI
Sbjct: 20 ASQLSLAGRITLPQSVLQAIPVYTMQTSEIPAGVINKINQICKRFIWSGSNENRKMSLIG 79
Query: 235 WNYVSLPKSLGGVQLKNL 182
W+ V PK GG+ LKNL
Sbjct: 80 WDKVCQPKLCGGLGLKNL 97
>sp|P0C2F6.1|RNHX1_ARATH RecName: Full=Putative ribonuclease H protein At1g65750
Length = 620
Score = 72.0 bits (175), Expect(2) = 2e-11
Identities = 35/75 (46%), Positives = 52/75 (69%)
Frame = -1
Query: 412 KYLSLAGRVTLFQSVISSIPVNLMQVSILPKAITNSLENITRKFLWCSTNEKWKLRLITW 233
K LS AGR+TL ++V+SS+PV+ M +LP++I N L+ ++R FLW ST EK K L+ W
Sbjct: 30 KTLSFAGRLTLTKAVLSSMPVHSMSTILLPQSILNRLDQLSRTFLWGSTAEKKKQHLVKW 89
Query: 232 NYVSLPKSLGGVQLK 188
+ V PK GG+ ++
Sbjct: 90 SKVCSPKKEGGLGVR 104
Score = 22.3 bits (46), Expect(2) = 2e-11
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = -3
Query: 173 NLALISEASWRFLNKHSS 120
N ALIS+ WR L + +S
Sbjct: 110 NRALISKVGWRLLQEKNS 127
>ref|XP_006480844.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Citrus
sinensis]
Length = 768
Score = 73.2 bits (178), Expect = 3e-11
Identities = 34/78 (43%), Positives = 50/78 (64%)
Frame = -1
Query: 415 AKYLSLAGRVTLFQSVISSIPVNLMQVSILPKAITNSLENITRKFLWCSTNEKWKLRLIT 236
A LSLAGR+TL QSV+ ++P+ MQ + LP +I L+ I R+FLW +E K+ L++
Sbjct: 211 ASQLSLAGRITLTQSVLQAVPIYAMQTTNLPGSIKTKLDQICRRFLWSGNDELRKMSLVS 270
Query: 235 WNYVSLPKSLGGVQLKNL 182
W+ + PK GG+ K L
Sbjct: 271 WHNICQPKMAGGLGFKRL 288
>gb|AAC63844.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1231
Score = 72.8 bits (177), Expect = 4e-11
Identities = 34/78 (43%), Positives = 55/78 (70%)
Frame = -1
Query: 418 EAKYLSLAGRVTLFQSVISSIPVNLMQVSILPKAITNSLENITRKFLWCSTNEKWKLRLI 239
+ + LSLAGR+TL ++V+SSIPV++M +LP + ++L+ +R FLW ST EK K L+
Sbjct: 643 KGRSLSLAGRITLTKAVLSSIPVHVMSAILLPVSTLDTLDRYSRTFLWGSTMEKKKQHLL 702
Query: 238 TWNYVSLPKSLGGVQLKN 185
+W + PK+ GG+ L++
Sbjct: 703 SWRKICKPKAEGGIGLRS 720
>ref|XP_004289445.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
vesca subsp. vesca]
Length = 719
Score = 71.6 bits (174), Expect = 1e-10
Identities = 35/76 (46%), Positives = 49/76 (64%)
Frame = -1
Query: 415 AKYLSLAGRVTLFQSVISSIPVNLMQVSILPKAITNSLENITRKFLWCSTNEKWKLRLIT 236
+K LS+AGR+TL QSV +SIP+ MQ + LP ++ S++ FLW +NEK K+ L+
Sbjct: 332 SKTLSMAGRLTLVQSVTASIPIYAMQTAKLPLSLCESIDKANINFLWGDSNEKKKIHLVN 391
Query: 235 WNYVSLPKSLGGVQLK 188
W V PK GG+ LK
Sbjct: 392 WESVCKPKHRGGLGLK 407
>emb|CAB10337.1| reverse transcriptase like protein [Arabidopsis thaliana]
gi|7268307|emb|CAB78601.1| reverse transcriptase like
protein [Arabidopsis thaliana]
Length = 929
Score = 71.6 bits (174), Expect = 1e-10
Identities = 33/77 (42%), Positives = 53/77 (68%)
Frame = -1
Query: 418 EAKYLSLAGRVTLFQSVISSIPVNLMQVSILPKAITNSLENITRKFLWCSTNEKWKLRLI 239
+++ LSLAGR+TL ++V+ SIP++ M +LP ++ L+ ++R FLW ST EK K L+
Sbjct: 578 KSRSLSLAGRITLTKAVLMSIPIHTMSSILLPASLLEQLDKVSRNFLWGSTVEKRKQHLL 637
Query: 238 TWNYVSLPKSLGGVQLK 188
+W V PK+ GG+ L+
Sbjct: 638 SWKKVCRPKAAGGLGLR 654
>gb|EOY07997.1| Uncharacterized protein TCM_022315 [Theobroma cacao]
Length = 667
Score = 71.2 bits (173), Expect = 1e-10
Identities = 34/82 (41%), Positives = 51/82 (62%)
Frame = -1
Query: 418 EAKYLSLAGRVTLFQSVISSIPVNLMQVSILPKAITNSLENITRKFLWCSTNEKWKLRLI 239
+AK LS+ GRV L +SV+SS+P+ M + +PK + LE I R+FLWC + +K K+ I
Sbjct: 231 KAKTLSIGGRVALLRSVLSSLPIFYMSIFQIPKRVIKELEKIERRFLWCGSEKKQKIHYI 290
Query: 238 TWNYVSLPKSLGGVQLKNLPNK 173
W+ V K GG+ + N+ K
Sbjct: 291 EWSKVCNYKENGGLGIINMEVK 312
>gb|EOY17515.1| Uncharacterized protein TCM_042331 [Theobroma cacao]
Length = 1176
Score = 70.9 bits (172), Expect = 2e-10
Identities = 33/81 (40%), Positives = 49/81 (60%)
Frame = -1
Query: 418 EAKYLSLAGRVTLFQSVISSIPVNLMQVSILPKAITNSLENITRKFLWCSTNEKWKLRLI 239
E K LSL GR+TL +SV+SS+P+ L+QV P + +E + FLW +NE +
Sbjct: 737 ENKVLSLGGRITLLRSVLSSLPMYLLQVLKPPAIVIEKIERLFNSFLWGDSNEGKMMHWA 796
Query: 238 TWNYVSLPKSLGGVQLKNLPN 176
WN ++ P S GG+ ++NL N
Sbjct: 797 AWNKITFPSSEGGLDIRNLKN 817
>gb|AAD37021.1| putative non-LTR retrolelement reverse transcriptase [Arabidopsis
thaliana]
Length = 732
Score = 70.9 bits (172), Expect = 2e-10
Identities = 34/77 (44%), Positives = 53/77 (68%)
Frame = -1
Query: 418 EAKYLSLAGRVTLFQSVISSIPVNLMQVSILPKAITNSLENITRKFLWCSTNEKWKLRLI 239
+ ++LSLAGRVTL ++V+SSIPV+ M LPK+ + L+ ++R FLW S+ + K LI
Sbjct: 305 KGRFLSLAGRVTLTKAVLSSIPVHTMSTIALPKSTLDGLDKVSRSFLWGSSVTQRKQHLI 364
Query: 238 TWNYVSLPKSLGGVQLK 188
+W V P+S GG+ ++
Sbjct: 365 SWKRVCKPRSEGGLGIR 381
>emb|CCA65997.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
Length = 1363
Score = 70.5 bits (171), Expect = 2e-10
Identities = 34/81 (41%), Positives = 51/81 (62%)
Frame = -1
Query: 418 EAKYLSLAGRVTLFQSVISSIPVNLMQVSILPKAITNSLENITRKFLWCSTNEKWKLRLI 239
+AKYL++AGR TL +SV+SS PV MQ S+LP ++ N +E RKFLW ++ L +
Sbjct: 783 QAKYLNMAGRCTLIKSVVSSFPVYGMQSSLLPVSVMNEIEKDCRKFLWNKMDKSHYLARM 842
Query: 238 TWNYVSLPKSLGGVQLKNLPN 176
+W+ + P GG+ + L N
Sbjct: 843 SWDRICSPTGKGGLGFRRLHN 863
>emb|CCA65974.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
Length = 1379
Score = 70.5 bits (171), Expect = 2e-10
Identities = 32/82 (39%), Positives = 52/82 (63%)
Frame = -1
Query: 418 EAKYLSLAGRVTLFQSVISSIPVNLMQVSILPKAITNSLENITRKFLWCSTNEKWKLRLI 239
++K LS+ GR+TL +S ++S+P+ M + +PK + + ITR+FLW EK L +
Sbjct: 776 KSKMLSIGGRLTLIKSSLASLPLYFMSLFPIPKGVVEKINMITRRFLWSGCAEKKTLPPV 835
Query: 238 TWNYVSLPKSLGGVQLKNLPNK 173
+W V LPKS GG+ + N+ +K
Sbjct: 836 SWKVVQLPKSRGGLNIGNVMHK 857
>gb|ABW81175.1| non-LTR retrotransposon transposase [Arabidopsis cebennensis]
Length = 799
Score = 70.1 bits (170), Expect = 3e-10
Identities = 32/78 (41%), Positives = 51/78 (65%)
Frame = -1
Query: 418 EAKYLSLAGRVTLFQSVISSIPVNLMQVSILPKAITNSLENITRKFLWCSTNEKWKLRLI 239
+ + LSLAGR+TL +SV+SSIP++ M LPKA + + I++ F+W S+ EK K L+
Sbjct: 235 KGRMLSLAGRLTLTKSVLSSIPIHTMSTIALPKATLDGFDRISKSFVWGSSTEKKKQHLL 294
Query: 238 TWNYVSLPKSLGGVQLKN 185
WN + K GG+ +++
Sbjct: 295 AWNKIYCTKQAGGLGIRS 312
>gb|EMJ28309.1| hypothetical protein PRUPE_ppa026753mg, partial [Prunus persica]
Length = 172
Score = 69.7 bits (169), Expect = 4e-10
Identities = 35/77 (45%), Positives = 51/77 (66%)
Frame = -1
Query: 418 EAKYLSLAGRVTLFQSVISSIPVNLMQVSILPKAITNSLENITRKFLWCSTNEKWKLRLI 239
+++ LS+AGR+TL QSV SSIP MQ++ LP+A+ L+ ++ FLW S+ K L
Sbjct: 68 KSQLLSMAGRITLIQSVASSIPQYTMQMAKLPQALCEDLDKSSKSFLWESSETHHKTHLG 127
Query: 238 TWNYVSLPKSLGGVQLK 188
W+ V LPK LGG+ +K
Sbjct: 128 KWDTVCLPKPLGGLGIK 144
>emb|CCA66140.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
Length = 1381
Score = 69.7 bits (169), Expect = 4e-10
Identities = 30/82 (36%), Positives = 53/82 (64%)
Frame = -1
Query: 418 EAKYLSLAGRVTLFQSVISSIPVNLMQVSILPKAITNSLENITRKFLWCSTNEKWKLRLI 239
+ K LS+ GR+TL +S + S+PV M + +P+ + N + + R+FLW ++ K + L+
Sbjct: 776 KCKMLSIGGRLTLIKSSLISLPVYFMSIYPMPQDVVNKIIGLARQFLWAGSDGKNAMPLV 835
Query: 238 TWNYVSLPKSLGGVQLKNLPNK 173
W+ + LPKSLGG+ + N+ +K
Sbjct: 836 AWSVLQLPKSLGGMGIGNIKHK 857
>ref|XP_006490008.1| PREDICTED: uncharacterized protein LOC102624085 [Citrus sinensis]
Length = 1635
Score = 69.3 bits (168), Expect = 5e-10
Identities = 31/78 (39%), Positives = 50/78 (64%)
Frame = -1
Query: 415 AKYLSLAGRVTLFQSVISSIPVNLMQVSILPKAITNSLENITRKFLWCSTNEKWKLRLIT 236
A +L+LAGR+TL QSV+ +I V MQ + LP++I ++ + R+F+W + E K+ L+
Sbjct: 1277 ASHLTLAGRITLAQSVLQAISVYAMQTTKLPRSIKMKIDQLCRRFIWSGSAEHQKMSLVN 1336
Query: 235 WNYVSLPKSLGGVQLKNL 182
W+ + PK GG+ K L
Sbjct: 1337 WDMICTPKCKGGLGFKKL 1354
>ref|XP_004306074.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
vesca subsp. vesca]
Length = 407
Score = 68.9 bits (167), Expect = 6e-10
Identities = 33/77 (42%), Positives = 49/77 (63%)
Frame = -1
Query: 418 EAKYLSLAGRVTLFQSVISSIPVNLMQVSILPKAITNSLENITRKFLWCSTNEKWKLRLI 239
++K LS+AGR+TL QSV S+IP MQ + P ++ +L+ + R FLW T K K+ L+
Sbjct: 43 KSKVLSMAGRLTLIQSVSSAIPNYAMQTAKFPVSLCENLDKLNRNFLWGDTEIKKKVHLV 102
Query: 238 TWNYVSLPKSLGGVQLK 188
W+ V PK LG + +K
Sbjct: 103 NWDVVCQPKQLGDIGIK 119
>emb|CCA66178.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
Length = 1381
Score = 68.9 bits (167), Expect = 6e-10
Identities = 29/82 (35%), Positives = 50/82 (60%)
Frame = -1
Query: 418 EAKYLSLAGRVTLFQSVISSIPVNLMQVSILPKAITNSLENITRKFLWCSTNEKWKLRLI 239
+ + LS+ GR+TL +S +S++P+ M + +PK + + ITR+FLW EK + L+
Sbjct: 776 KGRMLSIGGRLTLIKSSLSNLPLYFMSLFPIPKGVVEKINKITRRFLWSGDMEKRSIPLV 835
Query: 238 TWNYVSLPKSLGGVQLKNLPNK 173
W LPK +GG+ + N+ +K
Sbjct: 836 AWKIAQLPKDMGGLGIGNIFHK 857
>emb|CCA66153.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
Length = 1381
Score = 67.0 bits (162), Expect(2) = 1e-09
Identities = 29/82 (35%), Positives = 53/82 (64%)
Frame = -1
Query: 418 EAKYLSLAGRVTLFQSVISSIPVNLMQVSILPKAITNSLENITRKFLWCSTNEKWKLRLI 239
++ LS+ GR+TL ++ +S++P+ M + +PK + + I R+FLW + K + L+
Sbjct: 776 KSNLLSIGGRLTLIKACLSNLPLYYMSLFPIPKGVLGKIVAIQRRFLWSGNSSKKGMPLV 835
Query: 238 TWNYVSLPKSLGGVQLKNLPNK 173
+W+ ++LPK LGG+ L NL +K
Sbjct: 836 SWDLIALPKHLGGLGLGNLHHK 857
Score = 21.2 bits (43), Expect(2) = 1e-09
Identities = 8/16 (50%), Positives = 12/16 (75%)
Frame = -3
Query: 176 QNLALISEASWRFLNK 129
+N AL+ + WRFLN+
Sbjct: 857 KNTALLFKWIWRFLNE 872
>gb|EOY12746.1| Uncharacterized protein TCM_031281 [Theobroma cacao]
Length = 1408
Score = 68.2 bits (165), Expect = 1e-09
Identities = 32/82 (39%), Positives = 52/82 (63%)
Frame = -1
Query: 418 EAKYLSLAGRVTLFQSVISSIPVNLMQVSILPKAITNSLENITRKFLWCSTNEKWKLRLI 239
+ ++LS+ GR+TL SV+SS+P+ + + LP + LE I R FLW ++EK K+ +
Sbjct: 838 KGQFLSMGGRLTLINSVLSSLPLFYLSIFRLPTMVKQKLEAIQRNFLWFGSSEKKKIHYV 897
Query: 238 TWNYVSLPKSLGGVQLKNLPNK 173
W+ VS PK+ GG+ + +L K
Sbjct: 898 NWSTVSNPKTQGGLGIIDLELK 919
>emb|CAN82685.1| hypothetical protein VITISV_000485 [Vitis vinifera]
Length = 1563
Score = 66.2 bits (160), Expect(2) = 2e-09
Identities = 31/71 (43%), Positives = 43/71 (60%)
Frame = -1
Query: 409 YLSLAGRVTLFQSVISSIPVNLMQVSILPKAITNSLENITRKFLWCSTNEKWKLRLITWN 230
YLSL GR+TL QS +S IP + + +P +I + +E + R FLW E+ K L+ W
Sbjct: 730 YLSLGGRITLIQSCLSHIPSYFISLFKIPASIASKIEKMQRNFLWSGAGEEKKDHLVRWE 789
Query: 229 YVSLPKSLGGV 197
VS PK LGG+
Sbjct: 790 VVSRPKELGGL 800
Score = 21.2 bits (43), Expect(2) = 2e-09
Identities = 9/22 (40%), Positives = 14/22 (63%)
Frame = -3
Query: 188 KPSQQNLALISEASWRFLNKHS 123
K S +N+AL+ + WRF + S
Sbjct: 804 KISLRNIALLGKWLWRFPRERS 825