BLASTX nr result

ID: Catharanthus22_contig00037763 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus22_contig00037763
         (302 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EOY00707.1| Uncharacterized protein isoform 1 [Theobroma cacao]     57   3e-06
ref|XP_002315652.2| hypothetical protein POPTR_0010s06000g [Popu...    56   4e-06

>gb|EOY00707.1| Uncharacterized protein isoform 1 [Theobroma cacao]
          Length = 690

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 28/47 (59%), Positives = 39/47 (82%)
 Frame = +1

Query: 118 SKLMEDFLIRKILLTHDPDGSQLDTDLLLRAVKNVVFYATPISEVSD 258
           S L ++ LI+K+LL+HDPDG  LD+++LL AV+N++FYAT  SEVSD
Sbjct: 15  SFLDDEILIKKLLLSHDPDGRHLDSEMLLCAVENIMFYAT-TSEVSD 60


>ref|XP_002315652.2| hypothetical protein POPTR_0010s06000g [Populus trichocarpa]
           gi|550329180|gb|EEF01823.2| hypothetical protein
           POPTR_0010s06000g [Populus trichocarpa]
          Length = 663

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 29/53 (54%), Positives = 40/53 (75%)
 Frame = +1

Query: 76  NDSSSLLSTKSAEASKLMEDFLIRKILLTHDPDGSQLDTDLLLRAVKNVVFYA 234
           ND SS  S+  +E     +D LI+K+LLTHDPDG +LD++LLLRA++NV+ YA
Sbjct: 6   NDCSSQHSSMPSE-----DDILIKKLLLTHDPDGRRLDSELLLRAMENVLCYA 53


Top