BLASTX nr result

ID: Catharanthus22_contig00037728 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus22_contig00037728
         (306 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004233667.1| PREDICTED: zinc finger protein 252-like [Sol...    92   9e-17
ref|XP_003633858.1| PREDICTED: uncharacterized protein LOC100262...    72   1e-10
emb|CAN68959.1| hypothetical protein VITISV_019273 [Vitis vinifera]    72   1e-10
ref|XP_002526088.1| zinc finger protein, putative [Ricinus commu...    60   4e-07
gb|EXB38081.1| Zinc finger protein ZAT9 [Morus notabilis]              56   4e-06
ref|XP_002324101.2| hypothetical protein POPTR_0017s12740g [Popu...    56   6e-06

>ref|XP_004233667.1| PREDICTED: zinc finger protein 252-like [Solanum lycopersicum]
          Length = 460

 Score = 91.7 bits (226), Expect = 9e-17
 Identities = 49/84 (58%), Positives = 59/84 (70%), Gaps = 7/84 (8%)
 Frame = +2

Query: 2   KSFSSSRALAGHMRTHSVKNR---HLCDKCRKGFDSRRALYGHLKSHSKRSRV---STES 163
           K F S +ALAGH+RTHS K     H+C+KC KGF S RAL+GH+K HSKR RV    +ES
Sbjct: 124 KEFPSMKALAGHLRTHSKKGMEKCHICEKCGKGFVSMRALFGHMKVHSKRLRVDNQDSES 183

Query: 164 ADGLSEFDIDCP-RKKRSVIRYKL 232
              LS+FD  CP RKKRS I+YK+
Sbjct: 184 KQSLSDFDTVCPIRKKRSKIKYKM 207


>ref|XP_003633858.1| PREDICTED: uncharacterized protein LOC100262792 [Vitis vinifera]
          Length = 801

 Score = 71.6 bits (174), Expect = 1e-10
 Identities = 37/79 (46%), Positives = 51/79 (64%), Gaps = 1/79 (1%)
 Frame = +2

Query: 2   KSFSSSRALAGHMRTHSVKNRHLCDKCRKGFDSRRALYGHLKSHSKRSRVSTESADGL-S 178
           K F+SSRA+ GHMR HS +  +LC +C KGF S RAL GH++ HS+R R   ES     S
Sbjct: 70  KGFNSSRAVFGHMRHHS-RQENLCRECGKGFSSLRALSGHMRCHSERFRAIDESRTSCQS 128

Query: 179 EFDIDCPRKKRSVIRYKLT 235
           + +  CP +++   RYK+T
Sbjct: 129 QDETSCPTRRKRSQRYKMT 147


>emb|CAN68959.1| hypothetical protein VITISV_019273 [Vitis vinifera]
          Length = 1073

 Score = 71.6 bits (174), Expect = 1e-10
 Identities = 37/79 (46%), Positives = 51/79 (64%), Gaps = 1/79 (1%)
 Frame = +2

Query: 2   KSFSSSRALAGHMRTHSVKNRHLCDKCRKGFDSRRALYGHLKSHSKRSRVSTESADGL-S 178
           K F+SSRA+ GHMR HS +  +LC +C KGF S RAL GH++ HS+R R   ES     S
Sbjct: 267 KGFNSSRAVFGHMRHHS-RQENLCRECGKGFSSLRALSGHMRCHSERFRAIDESRTSCQS 325

Query: 179 EFDIDCPRKKRSVIRYKLT 235
           + +  CP +++   RYK+T
Sbjct: 326 QDETSCPTRRKRSQRYKMT 344


>ref|XP_002526088.1| zinc finger protein, putative [Ricinus communis]
           gi|223534585|gb|EEF36282.1| zinc finger protein,
           putative [Ricinus communis]
          Length = 577

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 29/56 (51%), Positives = 40/56 (71%), Gaps = 2/56 (3%)
 Frame = +2

Query: 2   KSFSSSRALAGHMRTHSVKNRH--LCDKCRKGFDSRRALYGHLKSHSKRSRVSTES 163
           K F S+R+L GHMR HSV+ R+   C +C KGF + R+L GH++ HS ++RVS ES
Sbjct: 91  KQFESARSLHGHMRHHSVEERNGVRCKECGKGFKTVRSLTGHMRLHSLKNRVSNES 146


>gb|EXB38081.1| Zinc finger protein ZAT9 [Morus notabilis]
          Length = 513

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 39/88 (44%), Positives = 46/88 (52%), Gaps = 12/88 (13%)
 Frame = +2

Query: 2   KSFSSSRALAGHMRTHSVKNRHL----CDKCRKGFDSRRALYGHLKSHSKRSR------V 151
           K F S RAL GHMR HS K +      C KC K F+S RAL GH+KSHS   R      V
Sbjct: 87  KGFDSMRALFGHMRHHSGKKKKKEQIHCKKCGKEFESLRALIGHMKSHSSEKRFVLGGGV 146

Query: 152 STESADGLSEFDIDCPRKKRS--VIRYK 229
             E   G +       RKKRS  ++RY+
Sbjct: 147 QREKLFGETS---QLVRKKRSRRLLRYR 171


>ref|XP_002324101.2| hypothetical protein POPTR_0017s12740g [Populus trichocarpa]
           gi|550320151|gb|EEF04234.2| hypothetical protein
           POPTR_0017s12740g [Populus trichocarpa]
          Length = 549

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 34/86 (39%), Positives = 52/86 (60%), Gaps = 8/86 (9%)
 Frame = +2

Query: 2   KSFSSSRALAGHMRTHSVKNRH--LCDKCRKGFDSRRALYGHLKSHSKRSRVSTESAD-- 169
           K F S ++L GHMR HS K R    C++C +GF S ++L  H++ H K+ RVS+   +  
Sbjct: 87  KEFGSPKSLHGHMRHHSAKERKGVYCEECGRGFLSLKSLSNHMRLHHKKLRVSSSGPNLV 146

Query: 170 --GLSEFD-IDCPRKKRSV-IRYKLT 235
              LS  + ++  R+KRS  +RYK+T
Sbjct: 147 VMALSATETVNLVRRKRSSRMRYKIT 172


Top