BLASTX nr result
ID: Catharanthus22_contig00037696
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Catharanthus22_contig00037696 (284 letters) Database: ./nr 37,332,560 sequences; 13,225,080,153 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_008081324.1| hypothetical chloroplast RF1 (chloroplast) [... 169 3e-40 gb|ADD30910.1| putative RF1 protein [Nerium oleander] 124 1e-26 ref|YP_817540.1| hypothetical chloroplast RF1 [Coffea arabica] g... 93 3e-17 ref|YP_008814915.1| hypothetical chloroplast RF19 (chloroplast) ... 73 4e-11 gb|AGM15031.1| Ycf1 (chloroplast) [Panax ginseng] gi|506444557|g... 72 8e-11 ref|YP_087024.1| ycf1 protein [Panax ginseng] gi|75117190|sp|Q68... 72 8e-11 ref|YP_008963365.1| hypothetical chloroplast RF19 [Camellia olei... 71 1e-10 gb|AFK81358.1| hypothetical chloroplast RF19 [Camellia sinensis ... 71 1e-10 ref|YP_008593172.1| hypothetical chloroplast RF1 (chloroplast) [... 71 1e-10 ref|YP_008593083.1| hypothetical chloroplast RF1 (chloroplast) [... 71 1e-10 ref|YP_008592994.1| hypothetical chloroplast RF1 (chloroplast) [... 71 1e-10 ref|YP_008592904.1| hypothetical chloroplast RF1 (chloroplast) [... 71 1e-10 ref|YP_007317307.1| Ycf1 (chloroplast) [Camellia sinensis] gi|43... 71 1e-10 ref|YP_008815263.1| hypothetical chloroplast RF19 (chloroplast) ... 70 2e-10 ref|YP_008815089.1| hypothetical chloroplast RF19 (chloroplast) ... 70 2e-10 ref|YP_004935611.1| ycf1 protein (chloroplast) [Eleutherococcus ... 70 4e-10 ref|YP_008520200.1| hypothetical chloroplast RF1 (chloroplast) [... 68 1e-09 gb|AGU44477.1| hypothetical chloroplast RF1 (chloroplast) [Camel... 68 1e-09 ref|YP_008592818.1| hypothetical chloroplast RF1 (chloroplast) [... 67 3e-09 gb|ADD30906.1| putative RF1 protein [Ilex cornuta] 67 3e-09 >ref|YP_008081324.1| hypothetical chloroplast RF1 (chloroplast) [Catharanthus roseus] gi|474452135|gb|AGI51203.1| hypothetical chloroplast RF1 (chloroplast) [Catharanthus roseus] Length = 1748 Score = 169 bits (429), Expect = 3e-40 Identities = 84/93 (90%), Positives = 84/93 (90%) Frame = -1 Query: 281 KPWVIPSKGXXXXXXXXXNVVSENKNIEGKQKGECVSKIKNRNQKEKEPVESKRDLRSNV 102 KPWVIPSKG NVVSENKNIEGKQKGECVSKIKNRNQKEKEPVESKRDLRSNV Sbjct: 1424 KPWVIPSKGLLLNLNRNENVVSENKNIEGKQKGECVSKIKNRNQKEKEPVESKRDLRSNV 1483 Query: 101 QKQGNTRSVPSTNHEKDMEDPYTKSKRKGGKKY 3 QKQGNTRSVPSTNHEKDMEDPYTKSKRKGGKKY Sbjct: 1484 QKQGNTRSVPSTNHEKDMEDPYTKSKRKGGKKY 1516 >gb|ADD30910.1| putative RF1 protein [Nerium oleander] Length = 1834 Score = 124 bits (311), Expect = 1e-26 Identities = 67/97 (69%), Positives = 70/97 (72%), Gaps = 4/97 (4%) Frame = -1 Query: 281 KPWVIPSKGXXXXXXXXXNVVSENKNIEGKQKGECVSKIK----NRNQKEKEPVESKRDL 114 KPWVIPSK N +SE KN+EG QKGECVS K NRNQKEKE VESKRDL Sbjct: 1508 KPWVIPSKVLLLNWNLNENALSEKKNVEGNQKGECVSNKKRKNPNRNQKEKESVESKRDL 1567 Query: 113 RSNVQKQGNTRSVPSTNHEKDMEDPYTKSKRKGGKKY 3 RSNVQ QGN SVPSTNHEKD+EDPY RKGGKKY Sbjct: 1568 RSNVQNQGNPGSVPSTNHEKDIEDPY--DARKGGKKY 1602 >ref|YP_817540.1| hypothetical chloroplast RF1 [Coffea arabica] gi|122153677|sp|A0A393.1|YCF1_COFAR RecName: Full=Putative membrane protein ycf1; Short=RF1 gi|116242222|gb|ABJ89737.1| hypothetical chloroplast RF1 [Coffea arabica] Length = 1874 Score = 93.2 bits (230), Expect = 3e-17 Identities = 54/100 (54%), Positives = 61/100 (61%), Gaps = 8/100 (8%) Frame = -1 Query: 281 KPWVIPSKGXXXXXXXXXNVVSENKNIEGKQKGECVS------KIKNRNQKEKEPVESKR 120 KPWVIPSK NV+S NKN++GKQK ECV K KN+NQKEKE + Sbjct: 1536 KPWVIPSKVLLFNLNLNENVISNNKNVDGKQKTECVIPSNKQIKNKNQNQKEKETPADQE 1595 Query: 119 DLRSNVQKQGNTRSVP--STNHEKDMEDPYTKSKRKGGKK 6 DLRS+ QKQGN SVP T EKD E+ Y SK K GKK Sbjct: 1596 DLRSDAQKQGNLGSVPPTKTKQEKDNEEDYAVSKIKAGKK 1635 >ref|YP_008814915.1| hypothetical chloroplast RF19 (chloroplast) [Aralia undulata] gi|458599149|gb|AGG39015.1| hypothetical chloroplast RF19 (chloroplast) [Aralia undulata] Length = 1933 Score = 72.8 bits (177), Expect = 4e-11 Identities = 46/100 (46%), Positives = 59/100 (59%), Gaps = 8/100 (8%) Frame = -1 Query: 284 KKPWVIPSKGXXXXXXXXXNVVSENKNIEGKQKGEC--------VSKIKNRNQKEKEPVE 129 KKPW+IPSK VS+NKNI GKQK + ++KNRNQ+EKEP + Sbjct: 1575 KKPWIIPSK-LLLLNLNRNKNVSDNKNINGKQKWNFFRPSNEKKIFELKNRNQEEKEPAD 1633 Query: 128 SKRDLRSNVQKQGNTRSVPSTNHEKDMEDPYTKSKRKGGK 9 +RDL S+ Q QGN R V S N +K++E+ Y K K GK Sbjct: 1634 -RRDLGSDAQNQGNRRFVLS-NQQKNIEEDYAKLVLKKGK 1671 >gb|AGM15031.1| Ycf1 (chloroplast) [Panax ginseng] gi|506444557|gb|AGM15117.1| Ycf1 (chloroplast) [Panax ginseng] gi|506444673|gb|AGM15203.1| Ycf1 (chloroplast) [Panax ginseng] Length = 1919 Score = 72.0 bits (175), Expect = 8e-11 Identities = 46/100 (46%), Positives = 58/100 (58%), Gaps = 8/100 (8%) Frame = -1 Query: 284 KKPWVIPSKGXXXXXXXXXNVVSENKNIEGKQKGEC--------VSKIKNRNQKEKEPVE 129 KKPW+IPSK VS+NKNI GKQK + ++KNRNQ+EKEP + Sbjct: 1561 KKPWIIPSK-LLLLNLNRNENVSDNKNINGKQKWNFFRPSNEKKIFELKNRNQEEKEPAD 1619 Query: 128 SKRDLRSNVQKQGNTRSVPSTNHEKDMEDPYTKSKRKGGK 9 + DL S+ Q QGN R V S N +KD+E+ Y K K GK Sbjct: 1620 -RGDLGSDAQNQGNRRFVLS-NQQKDIEEDYAKLVLKRGK 1657 >ref|YP_087024.1| ycf1 protein [Panax ginseng] gi|75117190|sp|Q68RU8.1|YCF1_PANGI RecName: Full=Putative membrane protein ycf1 gi|51235372|gb|AAT98568.1| ycf1 protein [Panax ginseng] Length = 1919 Score = 72.0 bits (175), Expect = 8e-11 Identities = 46/100 (46%), Positives = 58/100 (58%), Gaps = 8/100 (8%) Frame = -1 Query: 284 KKPWVIPSKGXXXXXXXXXNVVSENKNIEGKQKGEC--------VSKIKNRNQKEKEPVE 129 KKPW+IPSK VS+NKNI GKQK + ++KNRNQ+EKEP + Sbjct: 1561 KKPWIIPSK-LLLLNLNRNENVSDNKNINGKQKWNFFRPSNEKKIFELKNRNQEEKEPAD 1619 Query: 128 SKRDLRSNVQKQGNTRSVPSTNHEKDMEDPYTKSKRKGGK 9 + DL S+ Q QGN R V S N +KD+E+ Y K K GK Sbjct: 1620 -RGDLGSDAQNQGNRRFVLS-NQQKDIEEDYAKLVLKRGK 1657 >ref|YP_008963365.1| hypothetical chloroplast RF19 [Camellia oleifera] gi|388893354|gb|AFK81445.1| hypothetical chloroplast RF19 [Camellia oleifera] Length = 1875 Score = 71.2 bits (173), Expect = 1e-10 Identities = 47/98 (47%), Positives = 57/98 (58%), Gaps = 6/98 (6%) Frame = -1 Query: 281 KPWVIPSKGXXXXXXXXXNVVSENKNIEGKQKGECVS------KIKNRNQKEKEPVESKR 120 KPW IPSK SENKNI KQKG S ++KN+N+KEKE +R Sbjct: 1519 KPWFIPSKLLFFNINENG---SENKNINRKQKGVIPSNEKKKMELKNKNKKEKESA-GQR 1574 Query: 119 DLRSNVQKQGNTRSVPSTNHEKDMEDPYTKSKRKGGKK 6 DLRSN Q Q N SVPST +KD+E+ Y++S K KK Sbjct: 1575 DLRSNAQNQVNLVSVPST-EQKDIEEDYSESNMKNRKK 1611 >gb|AFK81358.1| hypothetical chloroplast RF19 [Camellia sinensis var. assamica] Length = 1875 Score = 71.2 bits (173), Expect = 1e-10 Identities = 47/98 (47%), Positives = 57/98 (58%), Gaps = 6/98 (6%) Frame = -1 Query: 281 KPWVIPSKGXXXXXXXXXNVVSENKNIEGKQKGECVS------KIKNRNQKEKEPVESKR 120 KPW IPSK SENKNI KQKG S ++KN+N+KEKE +R Sbjct: 1519 KPWFIPSKLLFFNINENG---SENKNINRKQKGVIPSNEKKKMELKNKNKKEKESA-GQR 1574 Query: 119 DLRSNVQKQGNTRSVPSTNHEKDMEDPYTKSKRKGGKK 6 DLRSN Q Q N SVPST +KD+E+ Y++S K KK Sbjct: 1575 DLRSNAQNQVNLVSVPST-EQKDIEEDYSESNMKNRKK 1611 >ref|YP_008593172.1| hypothetical chloroplast RF1 (chloroplast) [Camellia yunnanensis] gi|537362852|gb|AGU44655.1| hypothetical chloroplast RF1 (chloroplast) [Camellia yunnanensis] Length = 1873 Score = 71.2 bits (173), Expect = 1e-10 Identities = 47/98 (47%), Positives = 57/98 (58%), Gaps = 6/98 (6%) Frame = -1 Query: 281 KPWVIPSKGXXXXXXXXXNVVSENKNIEGKQKGECVS------KIKNRNQKEKEPVESKR 120 KPW IPSK SENKNI KQKG S ++KN+N+KEKE +R Sbjct: 1519 KPWFIPSKLLFFNINENG---SENKNINRKQKGVIPSNEKKKMELKNKNKKEKESA-GQR 1574 Query: 119 DLRSNVQKQGNTRSVPSTNHEKDMEDPYTKSKRKGGKK 6 DLRSN Q Q N SVPST +KD+E+ Y++S K KK Sbjct: 1575 DLRSNAQNQVNLVSVPST-EQKDIEEDYSESNMKNRKK 1611 >ref|YP_008593083.1| hypothetical chloroplast RF1 (chloroplast) [Camellia pitardii] gi|537362762|gb|AGU44566.1| hypothetical chloroplast RF1 (chloroplast) [Camellia pitardii] Length = 1871 Score = 71.2 bits (173), Expect = 1e-10 Identities = 47/98 (47%), Positives = 57/98 (58%), Gaps = 6/98 (6%) Frame = -1 Query: 281 KPWVIPSKGXXXXXXXXXNVVSENKNIEGKQKGECVS------KIKNRNQKEKEPVESKR 120 KPW IPSK SENKNI KQKG S ++KN+N+KEKE +R Sbjct: 1517 KPWFIPSKLLFFNINENG---SENKNINRKQKGVIPSNEKKKMELKNKNKKEKESA-GQR 1572 Query: 119 DLRSNVQKQGNTRSVPSTNHEKDMEDPYTKSKRKGGKK 6 DLRSN Q Q N SVPST +KD+E+ Y++S K KK Sbjct: 1573 DLRSNAQNQVNLVSVPST-EQKDIEEDYSESNMKNRKK 1609 >ref|YP_008592994.1| hypothetical chloroplast RF1 (chloroplast) [Camellia impressinervis] gi|537362582|gb|AGU44388.1| hypothetical chloroplast RF1 (chloroplast) [Camellia impressinervis] Length = 1873 Score = 71.2 bits (173), Expect = 1e-10 Identities = 47/98 (47%), Positives = 57/98 (58%), Gaps = 6/98 (6%) Frame = -1 Query: 281 KPWVIPSKGXXXXXXXXXNVVSENKNIEGKQKGECVS------KIKNRNQKEKEPVESKR 120 KPW IPSK SENKNI KQKG S ++KN+N+KEKE +R Sbjct: 1519 KPWFIPSKLLFFNINENG---SENKNINRKQKGVIPSNEKKKMELKNKNKKEKESA-GQR 1574 Query: 119 DLRSNVQKQGNTRSVPSTNHEKDMEDPYTKSKRKGGKK 6 DLRSN Q Q N SVPST +KD+E+ Y++S K KK Sbjct: 1575 DLRSNAQNQVNLVSVPST-EQKDIEEDYSESNMKNRKK 1611 >ref|YP_008592904.1| hypothetical chloroplast RF1 (chloroplast) [Camellia danzaiensis] gi|537362494|gb|AGU44301.1| hypothetical chloroplast RF1 (chloroplast) [Camellia danzaiensis] Length = 1871 Score = 71.2 bits (173), Expect = 1e-10 Identities = 47/98 (47%), Positives = 57/98 (58%), Gaps = 6/98 (6%) Frame = -1 Query: 281 KPWVIPSKGXXXXXXXXXNVVSENKNIEGKQKGECVS------KIKNRNQKEKEPVESKR 120 KPW IPSK SENKNI KQKG S ++KN+N+KEKE +R Sbjct: 1517 KPWFIPSKLLFFNINENG---SENKNINRKQKGVIPSNEKKKMELKNKNKKEKESA-GQR 1572 Query: 119 DLRSNVQKQGNTRSVPSTNHEKDMEDPYTKSKRKGGKK 6 DLRSN Q Q N SVPST +KD+E+ Y++S K KK Sbjct: 1573 DLRSNAQNQVNLVSVPST-EQKDIEEDYSESNMKNRKK 1609 >ref|YP_007317307.1| Ycf1 (chloroplast) [Camellia sinensis] gi|430728331|gb|AGA55655.1| Ycf1 (chloroplast) [Camellia sinensis] Length = 1873 Score = 71.2 bits (173), Expect = 1e-10 Identities = 47/98 (47%), Positives = 57/98 (58%), Gaps = 6/98 (6%) Frame = -1 Query: 281 KPWVIPSKGXXXXXXXXXNVVSENKNIEGKQKGECVS------KIKNRNQKEKEPVESKR 120 KPW IPSK SENKNI KQKG S ++KN+N+KEKE +R Sbjct: 1519 KPWFIPSKLLFFNINENG---SENKNINRKQKGVIPSNEKKKMELKNKNKKEKESA-GQR 1574 Query: 119 DLRSNVQKQGNTRSVPSTNHEKDMEDPYTKSKRKGGKK 6 DLRSN Q Q N SVPST +KD+E+ Y++S K KK Sbjct: 1575 DLRSNAQNQVNLVSVPST-EQKDIEEDYSESNMKNRKK 1611 >ref|YP_008815263.1| hypothetical chloroplast RF19 (chloroplast) [Kalopanax septemlobus] gi|458599671|gb|AGG39363.1| hypothetical chloroplast RF19 (chloroplast) [Kalopanax septemlobus] Length = 1877 Score = 70.5 bits (171), Expect = 2e-10 Identities = 45/100 (45%), Positives = 58/100 (58%), Gaps = 8/100 (8%) Frame = -1 Query: 284 KKPWVIPSKGXXXXXXXXXNVVSENKNIEGKQKGECVS--------KIKNRNQKEKEPVE 129 KKPW+IPSK VS+NKNI GKQK ++KNRNQ+EKEP + Sbjct: 1519 KKPWIIPSK-LLLLNLNINENVSDNKNINGKQKWNFFRLSNEKKYFELKNRNQEEKEPAD 1577 Query: 128 SKRDLRSNVQKQGNTRSVPSTNHEKDMEDPYTKSKRKGGK 9 +RDL S+ Q +GN S+ S N +KD+E+ Y K K GK Sbjct: 1578 -RRDLGSDAQNRGNRGSLLS-NQQKDIEEDYAKLVLKKGK 1615 >ref|YP_008815089.1| hypothetical chloroplast RF19 (chloroplast) [Metapanax delavayi] gi|458599430|gb|AGG39189.1| hypothetical chloroplast RF19 (chloroplast) [Metapanax delavayi] Length = 1876 Score = 70.5 bits (171), Expect = 2e-10 Identities = 46/100 (46%), Positives = 56/100 (56%), Gaps = 8/100 (8%) Frame = -1 Query: 284 KKPWVIPSKGXXXXXXXXXNVVSENKNIEGKQKGECVS--------KIKNRNQKEKEPVE 129 KKPW+IPSK VS+NKNI GKQK ++KNRNQ+EKEP Sbjct: 1518 KKPWIIPSK-LLLLNFNINENVSDNKNINGKQKWNFFRLSNEKKYFELKNRNQEEKEPA- 1575 Query: 128 SKRDLRSNVQKQGNTRSVPSTNHEKDMEDPYTKSKRKGGK 9 +RDL + Q QGN SV S N +KD+E+ Y K K GK Sbjct: 1576 GRRDLGPDAQNQGNRGSVLS-NQQKDIEEDYAKLVLKKGK 1614 >ref|YP_004935611.1| ycf1 protein (chloroplast) [Eleutherococcus senticosus] gi|347448265|gb|AEO92677.1| ycf1 protein (chloroplast) [Eleutherococcus senticosus] Length = 1875 Score = 69.7 bits (169), Expect = 4e-10 Identities = 46/100 (46%), Positives = 57/100 (57%), Gaps = 8/100 (8%) Frame = -1 Query: 284 KKPWVIPSKGXXXXXXXXXNVVSENKNIEGKQKGECVS--------KIKNRNQKEKEPVE 129 KKPW+IPSK VS+NKNI GKQK ++KNRNQ+EKEP + Sbjct: 1517 KKPWIIPSK-LLLLNLNINENVSDNKNINGKQKWNFFRLSNEKKYFELKNRNQEEKEPAD 1575 Query: 128 SKRDLRSNVQKQGNTRSVPSTNHEKDMEDPYTKSKRKGGK 9 +RDL S+ Q Q N SV S N +KD+E+ Y K K GK Sbjct: 1576 -RRDLGSDAQNQVNRGSVLS-NQQKDIEEDYAKLVLKKGK 1613 >ref|YP_008520200.1| hypothetical chloroplast RF1 (chloroplast) [Camellia taliensis] gi|537362942|gb|AGU44744.1| hypothetical chloroplast RF1 (chloroplast) [Camellia taliensis] Length = 1869 Score = 68.2 bits (165), Expect = 1e-09 Identities = 46/96 (47%), Positives = 56/96 (58%), Gaps = 4/96 (4%) Frame = -1 Query: 281 KPWVIPSKGXXXXXXXXXNVVSENKNIEGKQKGECVS----KIKNRNQKEKEPVESKRDL 114 KPW IPSK SENKNI KQKG S K++ +N+KEKE +RDL Sbjct: 1517 KPWFIPSKLLFFNINENG---SENKNINRKQKGVIPSNEKKKMELKNKKEKESA-GQRDL 1572 Query: 113 RSNVQKQGNTRSVPSTNHEKDMEDPYTKSKRKGGKK 6 RSN Q Q N SVPST +KD+E+ Y++S K KK Sbjct: 1573 RSNAQNQVNLVSVPST-EQKDIEEDYSESNMKNRKK 1607 >gb|AGU44477.1| hypothetical chloroplast RF1 (chloroplast) [Camellia taliensis] Length = 1869 Score = 68.2 bits (165), Expect = 1e-09 Identities = 46/96 (47%), Positives = 56/96 (58%), Gaps = 4/96 (4%) Frame = -1 Query: 281 KPWVIPSKGXXXXXXXXXNVVSENKNIEGKQKGECVS----KIKNRNQKEKEPVESKRDL 114 KPW IPSK SENKNI KQKG S K++ +N+KEKE +RDL Sbjct: 1517 KPWFIPSKLLFFNINENG---SENKNINRKQKGVIPSNEKKKMELKNKKEKESA-GQRDL 1572 Query: 113 RSNVQKQGNTRSVPSTNHEKDMEDPYTKSKRKGGKK 6 RSN Q Q N SVPST +KD+E+ Y++S K KK Sbjct: 1573 RSNAQNQVNLVSVPST-EQKDIEEDYSESNMKNRKK 1607 >ref|YP_008592818.1| hypothetical chloroplast RF1 (chloroplast) [Camellia cuspidata] gi|537362404|gb|AGU44212.1| hypothetical chloroplast RF1 (chloroplast) [Camellia cuspidata] Length = 1869 Score = 66.6 bits (161), Expect = 3e-09 Identities = 45/98 (45%), Positives = 55/98 (56%), Gaps = 6/98 (6%) Frame = -1 Query: 281 KPWVIPSKGXXXXXXXXXNVVSENKNIEGKQKGECVS------KIKNRNQKEKEPVESKR 120 KPW IPSK SENKNI KQKG S ++KN+N+KE +R Sbjct: 1517 KPWFIPSKLLFFNINENG---SENKNINRKQKGVIPSNEKKKMELKNKNKKESA---GQR 1570 Query: 119 DLRSNVQKQGNTRSVPSTNHEKDMEDPYTKSKRKGGKK 6 DLRSN Q Q N SVPST +KD+E+ Y++S K KK Sbjct: 1571 DLRSNAQNQVNLVSVPST-EQKDIEEDYSESNMKNRKK 1607 >gb|ADD30906.1| putative RF1 protein [Ilex cornuta] Length = 1897 Score = 66.6 bits (161), Expect = 3e-09 Identities = 45/105 (42%), Positives = 59/105 (56%), Gaps = 12/105 (11%) Frame = -1 Query: 281 KPWVIPSKGXXXXXXXXXNVVSENKNIEGKQKGECVS---------KIKNRNQKEKEPVE 129 KPW+IPSK VSENKN+ GK KG ++KNRNQ+EKEP + Sbjct: 1539 KPWIIPSK-LLLLNLNINENVSENKNVNGKPKGNFFIPSNEEKKSFELKNRNQEEKEPAD 1597 Query: 128 SKRDLRSNVQKQGNTRSVPSTNHEKDMEDPYTKS---KRKGGKKY 3 +RD S+ Q Q N S+ S N +KD+E+ Y +S KRK K+Y Sbjct: 1598 -RRDRGSDAQNQRNLGSLLS-NQQKDIEEDYARSDMKKRKTKKQY 1640