BLASTX nr result
ID: Catharanthus22_contig00037631
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus22_contig00037631
(453 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAD40090.2| OSJNBb0012A12.12 [Oryza sativa Japonica Group] 128 3e-33
emb|CAH67143.1| OSIGBa0130P02.7 [Oryza sativa Indica Group] 130 4e-33
gb|ABA95223.1| retrotransposon protein, putative, Ty3-gypsy subc... 130 5e-33
gb|AAN01260.1| Putative retroelement [Oryza sativa Japonica Grou... 129 9e-33
emb|CAH65865.1| OSIGBa0132I10.1 [Oryza sativa Indica Group] 129 9e-33
gb|AAK92588.1|AC074354_22 Putative retroelement [Oryza sativa Ja... 128 1e-32
gb|AAX96295.1| retrotransposon protein, putative, Ty3-gypsy sub-... 129 2e-32
gb|AAX96433.1| retrotransposon protein, putative, Ty3-gypsy sub-... 128 2e-32
gb|ABA98022.1| retrotransposon protein, putative, Ty3-gypsy subc... 129 2e-32
gb|EMJ21917.1| hypothetical protein PRUPE_ppa022673mg [Prunus pe... 131 2e-32
gb|AAV31274.1| putative polyprotein [Oryza sativa Japonica Group... 129 2e-32
gb|AAS07330.1| putative polyprotein [Oryza sativa Japonica Group... 128 2e-32
gb|AAM01143.1|AC108884_25 Putative retroelement [Oryza sativa Ja... 129 2e-32
gb|EMJ14281.1| hypothetical protein PRUPE_ppa021229mg [Prunus pe... 131 2e-32
gb|ABA96052.1| retrotransposon protein, putative, Ty3-gypsy subc... 128 2e-32
gb|AAV31373.1| putative polyprotein [Oryza sativa Japonica Group] 128 2e-32
gb|AAO19383.1| putative polyprotein [Oryza sativa Japonica Group... 128 2e-32
emb|CAH67488.1| H0306B06.3 [Oryza sativa Indica Group] 129 2e-32
gb|AAT85240.1| putative polyprotein [Oryza sativa Japonica Group] 128 2e-32
gb|ABA96234.2| retrotransposon protein, putative, Ty3-gypsy subc... 128 2e-32
>emb|CAD40090.2| OSJNBb0012A12.12 [Oryza sativa Japonica Group]
Length = 1581
Score = 128 bits (321), Expect(2) = 3e-33
Identities = 64/116 (55%), Positives = 81/116 (69%)
Frame = +2
Query: 104 HPQTDG*SERTIQTLEVILRPCALDFGNKWFDNLARAEFAYNNNYHLTIGMAPFEAS*GR 283
HPQTDG +ER Q LE +LR CALDFG W NL AEF+YNN+Y ++ MAP+EA GR
Sbjct: 1315 HPQTDGQTERVNQILEDMLRACALDFGGSWDKNLPYAEFSYNNSYQASLQMAPYEALYGR 1374
Query: 284 RCKTPLYWDEFGVRSYWK*KNLMPELEEIQKQVKIIQDRLRTTKSRQKSYADNRKR 451
+C+TPL WD+ G R + L E +++VKIIQ+RLR +SR KSYADNR+R
Sbjct: 1375 KCRTPLLWDQTGERQVFG----TDILREAEEKVKIIQERLRVAQSRHKSYADNRRR 1426
Score = 39.3 bits (90), Expect(2) = 3e-33
Identities = 17/29 (58%), Positives = 23/29 (79%)
Frame = +1
Query: 10 ILSDRVLMFTSRFWRKFQSAM*TKLSYST 96
I+SDR FTS+FW+KFQ M +KL++ST
Sbjct: 1284 IVSDRGSQFTSKFWKKFQEEMGSKLNFST 1312
>emb|CAH67143.1| OSIGBa0130P02.7 [Oryza sativa Indica Group]
Length = 1741
Score = 130 bits (328), Expect(2) = 4e-33
Identities = 65/116 (56%), Positives = 83/116 (71%)
Frame = +2
Query: 104 HPQTDG*SERTIQTLEVILRPCALDFGNKWFDNLARAEFAYNNNYHLTIGMAPFEAS*GR 283
HPQTDG +ER Q LE +LR CALDFG W NL AEF+YNN+Y ++ MAP+EA GR
Sbjct: 1475 HPQTDGQTERVNQILEDMLRACALDFGGSWDKNLPYAEFSYNNSYQASLQMAPYEALYGR 1534
Query: 284 RCKTPLYWDEFGVRSYWK*KNLMPELEEIQKQVKIIQDRLRTTKSRQKSYADNRKR 451
+C+TPL WD+ G R + M L+E +++VKIIQ+RLR +SR KSYADNR+R
Sbjct: 1535 KCRTPLLWDQTGERQVFG----MDILKEAEEKVKIIQERLRVAQSRHKSYADNRRR 1586
Score = 36.2 bits (82), Expect(2) = 4e-33
Identities = 16/29 (55%), Positives = 21/29 (72%)
Frame = +1
Query: 10 ILSDRVLMFTSRFWRKFQSAM*TKLSYST 96
I+SDR FTS FW+K Q M +KL++ST
Sbjct: 1444 IVSDRGSQFTSNFWKKLQEEMGSKLNFST 1472
>gb|ABA95223.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1874
Score = 130 bits (327), Expect(2) = 5e-33
Identities = 65/116 (56%), Positives = 82/116 (70%)
Frame = +2
Query: 104 HPQTDG*SERTIQTLEVILRPCALDFGNKWFDNLARAEFAYNNNYHLTIGMAPFEAS*GR 283
HPQTDG +ER Q LE +LR CALDFG W NL AEF+YNN+Y ++ MAP+EA GR
Sbjct: 199 HPQTDGQTERVNQILEDMLRACALDFGGSWDKNLPYAEFSYNNSYQASLQMAPYEALYGR 258
Query: 284 RCKTPLYWDEFGVRSYWK*KNLMPELEEIQKQVKIIQDRLRTTKSRQKSYADNRKR 451
+C+TPL WD+ G R + M L E +++VKIIQ+RLR +SR KSYADNR+R
Sbjct: 259 KCRTPLLWDQTGERQVFG----MDILREAEEKVKIIQERLRVAQSRHKSYADNRRR 310
Score = 36.2 bits (82), Expect(2) = 5e-33
Identities = 16/29 (55%), Positives = 21/29 (72%)
Frame = +1
Query: 10 ILSDRVLMFTSRFWRKFQSAM*TKLSYST 96
I+SDR FTS FW+K Q M +KL++ST
Sbjct: 168 IVSDRGSQFTSNFWKKLQEEMGSKLNFST 196
Score = 128 bits (321), Expect(2) = 3e-32
Identities = 64/116 (55%), Positives = 81/116 (69%)
Frame = +2
Query: 104 HPQTDG*SERTIQTLEVILRPCALDFGNKWFDNLARAEFAYNNNYHLTIGMAPFEAS*GR 283
HPQTDG +ER Q LE +LR CALDFG W NL AEF+YNN+Y ++ MAP+EA GR
Sbjct: 1608 HPQTDGQTERVNQILEDMLRACALDFGGSWDKNLPYAEFSYNNSYQASLQMAPYEALYGR 1667
Query: 284 RCKTPLYWDEFGVRSYWK*KNLMPELEEIQKQVKIIQDRLRTTKSRQKSYADNRKR 451
+C+TPL WD+ G R + L E +++VKIIQ+RLR +SR KSYADNR+R
Sbjct: 1668 KCRTPLLWDQTGERQVFG----TDILREAEEKVKIIQERLRVAQSRHKSYADNRRR 1719
Score = 36.2 bits (82), Expect(2) = 3e-32
Identities = 16/29 (55%), Positives = 21/29 (72%)
Frame = +1
Query: 10 ILSDRVLMFTSRFWRKFQSAM*TKLSYST 96
I+SDR FTS FW+K Q M +KL++ST
Sbjct: 1577 IVSDRGSQFTSNFWKKLQEEMGSKLNFST 1605
>gb|AAN01260.1| Putative retroelement [Oryza sativa Japonica Group]
gi|31431346|gb|AAP53141.1| retrotransposon protein,
putative, Ty3-gypsy subclass [Oryza sativa Japonica
Group]
Length = 1683
Score = 129 bits (325), Expect(2) = 9e-33
Identities = 64/116 (55%), Positives = 82/116 (70%)
Frame = +2
Query: 104 HPQTDG*SERTIQTLEVILRPCALDFGNKWFDNLARAEFAYNNNYHLTIGMAPFEAS*GR 283
HPQTDG +ER Q LE +LR CALDFG W NL AEF+YNN+Y ++ MAP+EA GR
Sbjct: 1417 HPQTDGQTERVNQILEDMLRACALDFGGSWDKNLPYAEFSYNNSYQASLQMAPYEALYGR 1476
Query: 284 RCKTPLYWDEFGVRSYWK*KNLMPELEEIQKQVKIIQDRLRTTKSRQKSYADNRKR 451
+C+TPL WD+ G R ++ L E +++VKIIQ+RLR +SR KSYADNR+R
Sbjct: 1477 KCRTPLLWDQTGERQVFR----TDILREAEEKVKIIQERLRVAQSRHKSYADNRRR 1528
Score = 36.2 bits (82), Expect(2) = 9e-33
Identities = 16/29 (55%), Positives = 21/29 (72%)
Frame = +1
Query: 10 ILSDRVLMFTSRFWRKFQSAM*TKLSYST 96
I+SDR FTS FW+K Q M +KL++ST
Sbjct: 1386 IVSDRGSQFTSNFWKKLQEEMGSKLNFST 1414
>emb|CAH65865.1| OSIGBa0132I10.1 [Oryza sativa Indica Group]
Length = 1670
Score = 129 bits (325), Expect(2) = 9e-33
Identities = 64/116 (55%), Positives = 82/116 (70%)
Frame = +2
Query: 104 HPQTDG*SERTIQTLEVILRPCALDFGNKWFDNLARAEFAYNNNYHLTIGMAPFEAS*GR 283
HPQTDG +ER Q LE +LR CALDFG W NL AEF+YNN+Y ++ MAP+EA GR
Sbjct: 1404 HPQTDGQTERVNQILEDMLRACALDFGGSWDKNLPYAEFSYNNSYQASLQMAPYEALYGR 1463
Query: 284 RCKTPLYWDEFGVRSYWK*KNLMPELEEIQKQVKIIQDRLRTTKSRQKSYADNRKR 451
+C+TPL WD+ G R ++ L E +++VKIIQ+RLR +SR KSYADNR+R
Sbjct: 1464 KCRTPLLWDQTGERQFFG----TDILREAEEKVKIIQERLRVAQSRHKSYADNRRR 1515
Score = 36.2 bits (82), Expect(2) = 9e-33
Identities = 16/29 (55%), Positives = 21/29 (72%)
Frame = +1
Query: 10 ILSDRVLMFTSRFWRKFQSAM*TKLSYST 96
I+SDR FTS FW+K Q M +KL++ST
Sbjct: 1373 IVSDRGSQFTSNFWKKLQEEMGSKLNFST 1401
>gb|AAK92588.1|AC074354_22 Putative retroelement [Oryza sativa Japonica Group]
gi|19881702|gb|AAM01103.1|AC098682_7 Putative
retroelement [Oryza sativa Japonica Group]
gi|31431123|gb|AAP52945.1| retrotransposon protein,
putative, Ty3-gypsy subclass [Oryza sativa Japonica
Group]
Length = 1777
Score = 128 bits (322), Expect(2) = 1e-32
Identities = 64/116 (55%), Positives = 84/116 (72%)
Frame = +2
Query: 104 HPQTDG*SERTIQTLEVILRPCALDFGNKWFDNLARAEFAYNNNYHLTIGMAPFEAS*GR 283
HPQTDG +ER Q LE +LR CALDFG W +L AEF+YNN+Y ++ MAPFEA GR
Sbjct: 1511 HPQTDGQTERVNQILEDMLRACALDFGGAWDKSLPYAEFSYNNSYQASLQMAPFEALYGR 1570
Query: 284 RCKTPLYWDEFGVRSYWK*KNLMPELEEIQKQVKIIQDRLRTTKSRQKSYADNRKR 451
+C+TPL+WD+ G R + K L E +++V+II++RLR +SRQKSYADNR+R
Sbjct: 1571 KCRTPLFWDQTGERQLFGTK----VLAEAEEKVRIIRERLRIAQSRQKSYADNRRR 1622
Score = 37.0 bits (84), Expect(2) = 1e-32
Identities = 16/29 (55%), Positives = 22/29 (75%)
Frame = +1
Query: 10 ILSDRVLMFTSRFWRKFQSAM*TKLSYST 96
I+SDR FTS+FW+K Q M T+L++ST
Sbjct: 1480 IVSDRGSQFTSKFWQKLQEEMGTRLNFST 1508
>gb|AAX96295.1| retrotransposon protein, putative, Ty3-gypsy sub-class [Oryza sativa
Japonica Group] gi|77548986|gb|ABA91783.1|
retrotransposon protein, putative, Ty3-gypsy subclass
[Oryza sativa Japonica Group]
Length = 1760
Score = 129 bits (324), Expect(2) = 2e-32
Identities = 64/116 (55%), Positives = 83/116 (71%)
Frame = +2
Query: 104 HPQTDG*SERTIQTLEVILRPCALDFGNKWFDNLARAEFAYNNNYHLTIGMAPFEAS*GR 283
HPQTDG +ER Q LE +LR CALDFG W NL AEF+YNN+Y ++ MAPFEA GR
Sbjct: 1494 HPQTDGQTERVNQILEDMLRACALDFGGAWDKNLPYAEFSYNNSYQASLQMAPFEALYGR 1553
Query: 284 RCKTPLYWDEFGVRSYWK*KNLMPELEEIQKQVKIIQDRLRTTKSRQKSYADNRKR 451
+C+TPL+WD+ G R + L E +++V+II++RLR +SRQKSYADNR+R
Sbjct: 1554 KCRTPLFWDQTGERQLFG----TEVLTEAEEKVRIIRERLRIAQSRQKSYADNRRR 1605
Score = 35.8 bits (81), Expect(2) = 2e-32
Identities = 15/29 (51%), Positives = 22/29 (75%)
Frame = +1
Query: 10 ILSDRVLMFTSRFWRKFQSAM*TKLSYST 96
I+SDR FTS+FW+K Q + T+L++ST
Sbjct: 1463 IVSDRGSQFTSKFWQKLQEELGTRLNFST 1491
>gb|AAX96433.1| retrotransposon protein, putative, Ty3-gypsy sub-class [Oryza sativa
Japonica Group] gi|77550058|gb|ABA92855.1|
retrotransposon protein, putative, Ty3-gypsy subclass
[Oryza sativa Japonica Group]
Length = 1636
Score = 128 bits (321), Expect(2) = 2e-32
Identities = 64/116 (55%), Positives = 81/116 (69%)
Frame = +2
Query: 104 HPQTDG*SERTIQTLEVILRPCALDFGNKWFDNLARAEFAYNNNYHLTIGMAPFEAS*GR 283
HPQTDG +ER Q LE +LR CALDFG W NL AEF+YNN+Y ++ MAP+EA GR
Sbjct: 1370 HPQTDGQTERVNQILEDMLRACALDFGGSWDKNLPYAEFSYNNSYQASLQMAPYEALYGR 1429
Query: 284 RCKTPLYWDEFGVRSYWK*KNLMPELEEIQKQVKIIQDRLRTTKSRQKSYADNRKR 451
+C+TPL WD+ G R + L E +++VKIIQ+RLR +SR KSYADNR+R
Sbjct: 1430 KCRTPLLWDQTGERQVFG----TDILREAEEKVKIIQERLRVAQSRHKSYADNRRR 1481
Score = 37.0 bits (84), Expect(2) = 2e-32
Identities = 16/29 (55%), Positives = 22/29 (75%)
Frame = +1
Query: 10 ILSDRVLMFTSRFWRKFQSAM*TKLSYST 96
I+SDR FTS+FW+K Q M +KL++ST
Sbjct: 1339 IVSDRGSQFTSKFWKKLQEEMGSKLNFST 1367
>gb|ABA98022.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1571
Score = 129 bits (324), Expect(2) = 2e-32
Identities = 64/116 (55%), Positives = 83/116 (71%)
Frame = +2
Query: 104 HPQTDG*SERTIQTLEVILRPCALDFGNKWFDNLARAEFAYNNNYHLTIGMAPFEAS*GR 283
HPQTDG +ER Q LE +LR CALDFG W NL AEF+YNN+Y ++ MAPFEA GR
Sbjct: 1389 HPQTDGQTERVNQILEDMLRACALDFGGAWDKNLPYAEFSYNNSYQASLQMAPFEALYGR 1448
Query: 284 RCKTPLYWDEFGVRSYWK*KNLMPELEEIQKQVKIIQDRLRTTKSRQKSYADNRKR 451
+C+TPL+WD+ G R + L E +++V+II++RLR +SRQKSYADNR+R
Sbjct: 1449 KCRTPLFWDQTGERQLFG----TEVLAEAEEKVRIIRERLRIAQSRQKSYADNRRR 1500
Score = 35.8 bits (81), Expect(2) = 2e-32
Identities = 15/29 (51%), Positives = 22/29 (75%)
Frame = +1
Query: 10 ILSDRVLMFTSRFWRKFQSAM*TKLSYST 96
I+SDR FTS+FW+K Q + T+L++ST
Sbjct: 1358 IVSDRGSQFTSKFWQKLQEKLGTRLNFST 1386
>gb|EMJ21917.1| hypothetical protein PRUPE_ppa022673mg [Prunus persica]
Length = 1506
Score = 131 bits (329), Expect(2) = 2e-32
Identities = 64/116 (55%), Positives = 84/116 (72%)
Frame = +2
Query: 104 HPQTDG*SERTIQTLEVILRPCALDFGNKWFDNLARAEFAYNNNYHLTIGMAPFEAS*GR 283
HPQTDG SERTIQTLE +LR CAL F W + L EFAYNN+Y ++IGM+PF+A GR
Sbjct: 1251 HPQTDGQSERTIQTLEDMLRACALQFQGDWDEKLPLMEFAYNNSYQVSIGMSPFDALYGR 1310
Query: 284 RCKTPLYWDEFGVRSYWK*KNLMPELEEIQKQVKIIQDRLRTTKSRQKSYADNRKR 451
+C+TP YWDE G + ++E +KQV+II++RL+T + RQKSYADNR++
Sbjct: 1311 QCRTPFYWDEVGEHRL----VVSEDVELTKKQVQIIRERLKTAQDRQKSYADNRRK 1362
Score = 33.9 bits (76), Expect(2) = 2e-32
Identities = 16/29 (55%), Positives = 19/29 (65%)
Frame = +1
Query: 10 ILSDRVLMFTSRFWRKFQSAM*TKLSYST 96
I+SDR FTSRFW K A T+L +ST
Sbjct: 1220 IVSDRDPRFTSRFWTKLHEAFGTQLQFST 1248
>gb|AAV31274.1| putative polyprotein [Oryza sativa Japonica Group]
gi|54287634|gb|AAV31378.1| putative polyprotein [Oryza
sativa Japonica Group]
Length = 1400
Score = 129 bits (323), Expect(2) = 2e-32
Identities = 65/116 (56%), Positives = 81/116 (69%)
Frame = +2
Query: 104 HPQTDG*SERTIQTLEVILRPCALDFGNKWFDNLARAEFAYNNNYHLTIGMAPFEAS*GR 283
HPQTDG +ER Q LE +LR CALDFG W NL AEF+YNN+Y +I MAP+EA GR
Sbjct: 1207 HPQTDGQTERVNQILEDMLRACALDFGGSWDKNLPYAEFSYNNSYQASIQMAPYEALYGR 1266
Query: 284 RCKTPLYWDEFGVRSYWK*KNLMPELEEIQKQVKIIQDRLRTTKSRQKSYADNRKR 451
+C+TPL WD+ G R + L E +++VKIIQ+RLR +SR KSYADNR+R
Sbjct: 1267 KCRTPLLWDQTGERQVFG----TDILREAEEKVKIIQERLRVAQSRHKSYADNRRR 1318
Score = 36.2 bits (82), Expect(2) = 2e-32
Identities = 16/29 (55%), Positives = 21/29 (72%)
Frame = +1
Query: 10 ILSDRVLMFTSRFWRKFQSAM*TKLSYST 96
I+SDR FTS FW+K Q M +KL++ST
Sbjct: 1176 IVSDRGSQFTSNFWKKLQEEMGSKLNFST 1204
>gb|AAS07330.1| putative polyprotein [Oryza sativa Japonica Group]
gi|108710255|gb|ABF98050.1| retrotransposon protein,
putative, Ty3-gypsy subclass [Oryza sativa Japonica
Group]
Length = 1294
Score = 128 bits (322), Expect(2) = 2e-32
Identities = 64/116 (55%), Positives = 81/116 (69%)
Frame = +2
Query: 104 HPQTDG*SERTIQTLEVILRPCALDFGNKWFDNLARAEFAYNNNYHLTIGMAPFEAS*GR 283
HPQTDG +ER Q LE +LR CALDFG W NL AEF+YNN+Y ++ MAP+EA GR
Sbjct: 1117 HPQTDGQTERVNQILEDMLRACALDFGGSWDKNLPYAEFSYNNSYQASLQMAPYEAMYGR 1176
Query: 284 RCKTPLYWDEFGVRSYWK*KNLMPELEEIQKQVKIIQDRLRTTKSRQKSYADNRKR 451
+C+TPL WD+ G R + L E +++VKIIQ+RLR +SR KSYADNR+R
Sbjct: 1177 KCRTPLLWDQTGERQVFG----TDILREAEEKVKIIQERLRVAQSRHKSYADNRRR 1228
Score = 36.6 bits (83), Expect(2) = 2e-32
Identities = 16/29 (55%), Positives = 22/29 (75%)
Frame = +1
Query: 10 ILSDRVLMFTSRFWRKFQSAM*TKLSYST 96
I+SDR FTS+FW+K Q M +KL++ST
Sbjct: 1086 IVSDRGSQFTSKFWKKLQEDMGSKLNFST 1114
>gb|AAM01143.1|AC108884_25 Putative retroelement [Oryza sativa Japonica Group]
gi|21263216|gb|AAM44893.1|AC122144_16 Putative
retroelement [Oryza sativa Japonica Group]
gi|31431896|gb|AAP53608.1| retrotransposon protein,
putative, Ty3-gypsy subclass [Oryza sativa Japonica
Group]
Length = 1245
Score = 129 bits (324), Expect(2) = 2e-32
Identities = 64/116 (55%), Positives = 83/116 (71%)
Frame = +2
Query: 104 HPQTDG*SERTIQTLEVILRPCALDFGNKWFDNLARAEFAYNNNYHLTIGMAPFEAS*GR 283
HPQTDG +ER Q LE +LR CALDFG W NL AEF+YNN+Y ++ MAPFEA GR
Sbjct: 1048 HPQTDGQTERVNQILEDMLRACALDFGGAWDKNLPYAEFSYNNSYQASLQMAPFEALYGR 1107
Query: 284 RCKTPLYWDEFGVRSYWK*KNLMPELEEIQKQVKIIQDRLRTTKSRQKSYADNRKR 451
+C+TPL+WD+ G R + L E +++V+II++RLR +SRQKSYADNR+R
Sbjct: 1108 KCRTPLFWDQTGERQLFG----TEVLAEAEEKVRIIRERLRIAQSRQKSYADNRRR 1159
Score = 35.8 bits (81), Expect(2) = 2e-32
Identities = 15/29 (51%), Positives = 22/29 (75%)
Frame = +1
Query: 10 ILSDRVLMFTSRFWRKFQSAM*TKLSYST 96
I+SDR FTS+FW+K Q + T+L++ST
Sbjct: 1017 IVSDRGSQFTSKFWQKLQEELGTRLNFST 1045
>gb|EMJ14281.1| hypothetical protein PRUPE_ppa021229mg [Prunus persica]
Length = 1194
Score = 131 bits (329), Expect(2) = 2e-32
Identities = 64/116 (55%), Positives = 84/116 (72%)
Frame = +2
Query: 104 HPQTDG*SERTIQTLEVILRPCALDFGNKWFDNLARAEFAYNNNYHLTIGMAPFEAS*GR 283
HPQTDG SERTIQTLE +LR CAL F W + L EFAYNN+Y ++IGM+PF+A GR
Sbjct: 939 HPQTDGQSERTIQTLEHMLRACALQFRGDWDEKLPLMEFAYNNSYQVSIGMSPFDALYGR 998
Query: 284 RCKTPLYWDEFGVRSYWK*KNLMPELEEIQKQVKIIQDRLRTTKSRQKSYADNRKR 451
+C+TP YWDE G + ++E +KQV+II++RL+T + RQKSYADNR++
Sbjct: 999 QCRTPFYWDEVGEHRL----VVSEDVELTKKQVQIIRERLKTAQDRQKSYADNRRK 1050
Score = 33.9 bits (76), Expect(2) = 2e-32
Identities = 16/29 (55%), Positives = 19/29 (65%)
Frame = +1
Query: 10 ILSDRVLMFTSRFWRKFQSAM*TKLSYST 96
I+SDR FTSRFW K A T+L +ST
Sbjct: 908 IVSDRDPRFTSRFWTKLNEAFGTQLQFST 936
>gb|ABA96052.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 307
Score = 128 bits (321), Expect(2) = 2e-32
Identities = 64/116 (55%), Positives = 81/116 (69%)
Frame = +2
Query: 104 HPQTDG*SERTIQTLEVILRPCALDFGNKWFDNLARAEFAYNNNYHLTIGMAPFEAS*GR 283
HPQTDG +ER Q LE +LR CALDFG W NL AEF+YNN+Y ++ MAP+EA GR
Sbjct: 129 HPQTDGQTERVNQILEDMLRACALDFGGSWDKNLPYAEFSYNNSYQASLQMAPYEALYGR 188
Query: 284 RCKTPLYWDEFGVRSYWK*KNLMPELEEIQKQVKIIQDRLRTTKSRQKSYADNRKR 451
+C+TPL WD+ G R + L E +++VKIIQ+RLR +SR KSYADNR+R
Sbjct: 189 KCRTPLLWDQTGERQVFG----TDILREAEEKVKIIQERLRVAQSRHKSYADNRRR 240
Score = 37.0 bits (84), Expect(2) = 2e-32
Identities = 16/29 (55%), Positives = 22/29 (75%)
Frame = +1
Query: 10 ILSDRVLMFTSRFWRKFQSAM*TKLSYST 96
I+SDR FTS+FW+K Q M +KL++ST
Sbjct: 98 IVSDRGSQFTSKFWKKLQEEMGSKLNFST 126
>gb|AAV31373.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 2408
Score = 128 bits (322), Expect(2) = 2e-32
Identities = 64/116 (55%), Positives = 81/116 (69%)
Frame = +2
Query: 104 HPQTDG*SERTIQTLEVILRPCALDFGNKWFDNLARAEFAYNNNYHLTIGMAPFEAS*GR 283
HPQTDG +ER Q LE +LR C LDFG W NL AEF+YNN+Y ++ MAP+EA GR
Sbjct: 1150 HPQTDGQTERVNQILEDMLRACVLDFGGSWDKNLPYAEFSYNNSYQASLQMAPYEALYGR 1209
Query: 284 RCKTPLYWDEFGVRSYWK*KNLMPELEEIQKQVKIIQDRLRTTKSRQKSYADNRKR 451
+C+TPL WD+ G R + L E +++VKIIQ+RLR +SRQKSYADNR+R
Sbjct: 1210 KCRTPLLWDQTGERQVFG----TDILREAEEKVKIIQERLRVAQSRQKSYADNRRR 1261
Score = 36.2 bits (82), Expect(2) = 2e-32
Identities = 16/29 (55%), Positives = 22/29 (75%)
Frame = +1
Query: 10 ILSDRVLMFTSRFWRKFQSAM*TKLSYST 96
I+SDR FTS+FW+K Q M T+L++ST
Sbjct: 1119 IVSDRGSQFTSKFWQKLQLEMGTRLNFST 1147
>gb|AAO19383.1| putative polyprotein [Oryza sativa Japonica Group]
gi|108710558|gb|ABF98353.1| retrotransposon protein,
putative, Ty3-gypsy subclass [Oryza sativa Japonica
Group]
Length = 1770
Score = 128 bits (322), Expect(2) = 2e-32
Identities = 64/116 (55%), Positives = 81/116 (69%)
Frame = +2
Query: 104 HPQTDG*SERTIQTLEVILRPCALDFGNKWFDNLARAEFAYNNNYHLTIGMAPFEAS*GR 283
HPQTDG +ER Q LE +LR CALDFG W NL AEF+YNN+Y ++ MAP+EA GR
Sbjct: 1488 HPQTDGQTERVNQVLEDMLRACALDFGGSWDKNLPYAEFSYNNSYQASLQMAPYEALYGR 1547
Query: 284 RCKTPLYWDEFGVRSYWK*KNLMPELEEIQKQVKIIQDRLRTTKSRQKSYADNRKR 451
+C+TPL WD+ G R + L E +++VKIIQ+RLR +SR KSYADNR+R
Sbjct: 1548 KCRTPLLWDQTGERQVFG----TDILREAEEKVKIIQERLRVAQSRHKSYADNRRR 1599
Score = 36.2 bits (82), Expect(2) = 2e-32
Identities = 16/29 (55%), Positives = 21/29 (72%)
Frame = +1
Query: 10 ILSDRVLMFTSRFWRKFQSAM*TKLSYST 96
I+SDR FTS FW+K Q M +KL++ST
Sbjct: 1457 IVSDRGSQFTSNFWKKLQEEMGSKLNFST 1485
>emb|CAH67488.1| H0306B06.3 [Oryza sativa Indica Group]
Length = 1510
Score = 129 bits (323), Expect(2) = 2e-32
Identities = 63/116 (54%), Positives = 84/116 (72%)
Frame = +2
Query: 104 HPQTDG*SERTIQTLEVILRPCALDFGNKWFDNLARAEFAYNNNYHLTIGMAPFEAS*GR 283
HPQTDG +ER Q LE +LR CALDFG W +L AEF+YNN+Y ++ MAPFEA GR
Sbjct: 1244 HPQTDGQTERVNQILEDMLRACALDFGGAWDKSLPYAEFSYNNSYQASLQMAPFEALYGR 1303
Query: 284 RCKTPLYWDEFGVRSYWK*KNLMPELEEIQKQVKIIQDRLRTTKSRQKSYADNRKR 451
+C+TPL+WD+ G R ++ L E +++V+II++RLR +SRQKSYADNR+R
Sbjct: 1304 KCRTPLFWDQTGERQLFR----TEVLAEAEEKVRIIRERLRIAQSRQKSYADNRRR 1355
Score = 35.8 bits (81), Expect(2) = 2e-32
Identities = 15/29 (51%), Positives = 22/29 (75%)
Frame = +1
Query: 10 ILSDRVLMFTSRFWRKFQSAM*TKLSYST 96
I+SDR FTS+FW+K Q + T+L++ST
Sbjct: 1213 IVSDRGSQFTSKFWQKLQEELGTRLNFST 1241
>gb|AAT85240.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1472
Score = 128 bits (322), Expect(2) = 2e-32
Identities = 64/116 (55%), Positives = 81/116 (69%)
Frame = +2
Query: 104 HPQTDG*SERTIQTLEVILRPCALDFGNKWFDNLARAEFAYNNNYHLTIGMAPFEAS*GR 283
HPQTDG +ER Q LE +LR C LDFG W NL AEF+YNN+Y ++ MAP+EA GR
Sbjct: 1206 HPQTDGQTERVNQILEDMLRACVLDFGGSWDKNLPYAEFSYNNSYQASLQMAPYEALYGR 1265
Query: 284 RCKTPLYWDEFGVRSYWK*KNLMPELEEIQKQVKIIQDRLRTTKSRQKSYADNRKR 451
+C+TPL WD+ G R + L E +++VKIIQ+RLR +SRQKSYADNR+R
Sbjct: 1266 KCRTPLLWDQTGERQVFG----TDILREAEEKVKIIQERLRVAQSRQKSYADNRRR 1317
Score = 36.2 bits (82), Expect(2) = 2e-32
Identities = 16/29 (55%), Positives = 22/29 (75%)
Frame = +1
Query: 10 ILSDRVLMFTSRFWRKFQSAM*TKLSYST 96
I+SDR FTS+FW+K Q M T+L++ST
Sbjct: 1175 IVSDRGSQFTSKFWQKLQLEMGTRLNFST 1203
>gb|ABA96234.2| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1407
Score = 128 bits (322), Expect(2) = 2e-32
Identities = 66/116 (56%), Positives = 83/116 (71%)
Frame = +2
Query: 104 HPQTDG*SERTIQTLEVILRPCALDFGNKWFDNLARAEFAYNNNYHLTIGMAPFEAS*GR 283
HPQTDG +ER Q LE +LR CALDFG W NL AEF+YNN+Y ++ MAP+EA GR
Sbjct: 1141 HPQTDGQTERVNQILEDMLRACALDFGGSWDKNLPYAEFSYNNSYQASLQMAPYEALYGR 1200
Query: 284 RCKTPLYWDEFGVRSYWK*KNLMPELEEIQKQVKIIQDRLRTTKSRQKSYADNRKR 451
+C+TPL WD+ G R + +L+ E EE +VKIIQ+RLR +SR KSYADNR+R
Sbjct: 1201 KCRTPLLWDQTGERQVFG-TDLLREAEE---KVKIIQERLRVAQSRHKSYADNRRR 1252
Score = 36.2 bits (82), Expect(2) = 2e-32
Identities = 16/29 (55%), Positives = 21/29 (72%)
Frame = +1
Query: 10 ILSDRVLMFTSRFWRKFQSAM*TKLSYST 96
I+SDR FTS FW+K Q M +KL++ST
Sbjct: 1110 IVSDRGSQFTSNFWKKLQEEMGSKLNFST 1138