BLASTX nr result
ID: Catharanthus22_contig00037609
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus22_contig00037609
(653 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006279274.1| hypothetical protein CARUB_v100165480mg, par... 69 2e-09
gb|EOY19559.1| T6D22.19, putative [Theobroma cacao] 62 1e-08
gb|AAD17360.1| contains similarity to transposase [Arabidopsis t... 66 1e-08
pir||H85073 probable transposon protein [imported] - Arabidopsis... 64 3e-08
gb|EOY16179.1| T6D22.19-like protein [Theobroma cacao] 60 2e-07
gb|AAD24567.1|AF120335_1 putative transposase [Arabidopsis thali... 61 3e-07
gb|AAF79835.1|AC026875_15 T6D22.19 [Arabidopsis thaliana] 61 3e-07
gb|AAF19546.1|AC007190_14 F23N19.13 [Arabidopsis thaliana] 60 4e-07
gb|AAF78383.1|AC069551_16 T10O22.20 [Arabidopsis thaliana] 59 1e-06
ref|XP_006280333.1| hypothetical protein CARUB_v10026257mg [Caps... 59 1e-06
gb|EOY16831.1| BED zinc finger,hAT family dimerization domain [T... 57 5e-06
>ref|XP_006279274.1| hypothetical protein CARUB_v100165480mg, partial [Capsella rubella]
gi|482547953|gb|EOA12172.1| hypothetical protein
CARUB_v100165480mg, partial [Capsella rubella]
Length = 288
Score = 68.6 bits (166), Expect = 2e-09
Identities = 31/71 (43%), Positives = 49/71 (69%)
Frame = +1
Query: 439 RDVDAIIIDNEGKIRSRNFFQKVLREKIAIAIIKHNLPYSYMEYEGIGDIYTYLNLDVKD 618
+DV +++ EGK+++R QK+ RE IA+AI++H LPYS+++Y I + TY N D+K
Sbjct: 90 QDVGDMMMTYEGKLKARKLDQKIFREMIAMAIVEHGLPYSFVDYRRIRNALTYANPDIKH 149
Query: 619 ISRNTVALDVW 651
SRNT + D +
Sbjct: 150 WSRNTTSSDCY 160
>gb|EOY19559.1| T6D22.19, putative [Theobroma cacao]
Length = 559
Score = 61.6 bits (148), Expect(3) = 1e-08
Identities = 30/65 (46%), Positives = 45/65 (69%)
Frame = +1
Query: 454 IIIDNEGKIRSRNFFQKVLREKIAIAIIKHNLPYSYMEYEGIGDIYTYLNLDVKDISRNT 633
++ID EGK+++R F ++ R+ +A AIIKH+LPY+++EY+ I Y+N DV SRNT
Sbjct: 106 MLIDYEGKVKARKFDPRISRDMLAEAIIKHDLPYAFVEYDKIRAWAKYVNPDVVMPSRNT 165
Query: 634 VALDV 648
DV
Sbjct: 166 TVSDV 170
Score = 21.9 bits (45), Expect(3) = 1e-08
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = +2
Query: 368 GGNKYGTSTLSFHI 409
GG+ YGTS L HI
Sbjct: 79 GGSNYGTSHLRRHI 92
Score = 21.6 bits (44), Expect(3) = 1e-08
Identities = 8/21 (38%), Positives = 12/21 (57%)
Frame = +3
Query: 276 SKDVWAYAKSLGVSKDGKARA 338
+ +VW Y +G +DG RA
Sbjct: 43 TSNVWNYFTKIGKKQDGVERA 63
>gb|AAD17360.1| contains similarity to transposase [Arabidopsis thaliana]
Length = 428
Score = 65.9 bits (159), Expect = 1e-08
Identities = 32/80 (40%), Positives = 52/80 (65%)
Frame = +1
Query: 409 KKCSGVRYKFRDVDAIIIDNEGKIRSRNFFQKVLREKIAIAIIKHNLPYSYMEYEGIGDI 588
+KC +R + D+ +I++ E K+++R V REK+A II+H+L ++Y+EYE + +
Sbjct: 156 EKCK-IRLRNSDIGTMIVNAEAKLQARKIDHIVFREKVAKCIIQHDLLFAYVEYEKVRSV 214
Query: 589 YTYLNLDVKDISRNTVALDV 648
+ YLN VK I+RNT DV
Sbjct: 215 WKYLNAYVKFITRNTTVADV 234
>pir||H85073 probable transposon protein [imported] - Arabidopsis thaliana
gi|5032279|gb|AAD38227.1|AF147264_10 may be a pseudogene
[Arabidopsis thaliana] gi|7267351|emb|CAB81124.1|
putative transposon protein [Arabidopsis thaliana]
Length = 483
Score = 64.3 bits (155), Expect = 3e-08
Identities = 29/65 (44%), Positives = 44/65 (67%)
Frame = +1
Query: 457 IIDNEGKIRSRNFFQKVLREKIAIAIIKHNLPYSYMEYEGIGDIYTYLNLDVKDISRNTV 636
+++ K ++R Q V RE +A II+H+LP+SY+EYE + + + YLN DVK SRNT
Sbjct: 1 MVNAVAKFQARKIDQSVFRELVAKTIIQHDLPFSYVEYERVRETWKYLNADVKFFSRNTA 60
Query: 637 ALDVW 651
A D++
Sbjct: 61 AADIY 65
>gb|EOY16179.1| T6D22.19-like protein [Theobroma cacao]
Length = 485
Score = 59.7 bits (143), Expect(2) = 2e-07
Identities = 28/65 (43%), Positives = 45/65 (69%)
Frame = +1
Query: 454 IIIDNEGKIRSRNFFQKVLREKIAIAIIKHNLPYSYMEYEGIGDIYTYLNLDVKDISRNT 633
+++D EGK+++R F+ ++ R+ +A AIIKH LP++++EY+ I Y+N DV SRNT
Sbjct: 172 MLMDYEGKVKARKFYPRISRDMLAEAIIKHYLPHAFVEYDKIRAWAKYVNPDVVMPSRNT 231
Query: 634 VALDV 648
DV
Sbjct: 232 AVSDV 236
Score = 21.9 bits (45), Expect(2) = 2e-07
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = +2
Query: 368 GGNKYGTSTLSFHI 409
GG+ YGTS L HI
Sbjct: 145 GGSNYGTSHLRRHI 158
>gb|AAD24567.1|AF120335_1 putative transposase [Arabidopsis thaliana]
Length = 577
Score = 61.2 bits (147), Expect = 3e-07
Identities = 28/56 (50%), Positives = 39/56 (69%)
Frame = +1
Query: 484 SRNFFQKVLREKIAIAIIKHNLPYSYMEYEGIGDIYTYLNLDVKDISRNTVALDVW 651
SR V RE IA+A+++HNLPYS++EYE I + +TY N ++ SRNT A DV+
Sbjct: 19 SRKVDMMVFREMIAVALVQHNLPYSFVEYERIREAFTYANPSIEFWSRNTAAFDVY 74
>gb|AAF79835.1|AC026875_15 T6D22.19 [Arabidopsis thaliana]
Length = 745
Score = 61.2 bits (147), Expect = 3e-07
Identities = 28/56 (50%), Positives = 40/56 (71%)
Frame = +1
Query: 484 SRNFFQKVLREKIAIAIIKHNLPYSYMEYEGIGDIYTYLNLDVKDISRNTVALDVW 651
SR V RE IA+A+++HNLPYS++EYE I + +TY+N ++ SRNT A DV+
Sbjct: 202 SRKVDMMVFREMIAVALVQHNLPYSFVEYERIREAFTYVNPSIEFWSRNTAASDVY 257
>gb|AAF19546.1|AC007190_14 F23N19.13 [Arabidopsis thaliana]
Length = 633
Score = 60.5 bits (145), Expect = 4e-07
Identities = 28/56 (50%), Positives = 39/56 (69%)
Frame = +1
Query: 484 SRNFFQKVLREKIAIAIIKHNLPYSYMEYEGIGDIYTYLNLDVKDISRNTVALDVW 651
SR V RE IA+A+++HNLPYS++EYE I + +TY N ++ SRNT A DV+
Sbjct: 112 SRKVDMMVFREMIAVALVQHNLPYSFVEYERIREAFTYANPSIEFWSRNTAASDVY 167
>gb|AAF78383.1|AC069551_16 T10O22.20 [Arabidopsis thaliana]
Length = 876
Score = 59.3 bits (142), Expect = 1e-06
Identities = 28/56 (50%), Positives = 39/56 (69%)
Frame = +1
Query: 484 SRNFFQKVLREKIAIAIIKHNLPYSYMEYEGIGDIYTYLNLDVKDISRNTVALDVW 651
SR V RE IA+A+++HNLPYS++EYE I + +TY N ++ SRNT A DV+
Sbjct: 286 SRKVDMMVFREMIAVALVQHNLPYSFVEYERIREAFTYANPYIEFWSRNTAASDVY 341
>ref|XP_006280333.1| hypothetical protein CARUB_v10026257mg [Capsella rubella]
gi|482549037|gb|EOA13231.1| hypothetical protein
CARUB_v10026257mg [Capsella rubella]
Length = 508
Score = 58.9 bits (141), Expect = 1e-06
Identities = 26/65 (40%), Positives = 44/65 (67%)
Frame = +1
Query: 454 IIIDNEGKIRSRNFFQKVLREKIAIAIIKHNLPYSYMEYEGIGDIYTYLNLDVKDISRNT 633
+++D + K+R++ QK++REK + +I+H+LP+S +EYE + D Y+N D +RNT
Sbjct: 1 MMLDADMKLRAKKIDQKIVREKFSRVLIRHDLPFSAVEYEELRDFLKYMNPDYISYTRNT 60
Query: 634 VALDV 648
A DV
Sbjct: 61 AASDV 65
>gb|EOY16831.1| BED zinc finger,hAT family dimerization domain [Theobroma cacao]
Length = 495
Score = 57.0 bits (136), Expect = 5e-06
Identities = 33/78 (42%), Positives = 43/78 (55%), Gaps = 3/78 (3%)
Frame = +1
Query: 424 VRYKFRDVDAIIIDNEGK---IRSRNFFQKVLREKIAIAIIKHNLPYSYMEYEGIGDIYT 594
VR RD+ +I E +RS F + RE + AI+ HNLP S++EY GI +
Sbjct: 96 VRKDTRDIGQMIFSKEHNSMLMRSSKFDLEKFRELVVAAIVMHNLPLSFVEYTGIKSMLP 155
Query: 595 YLNLDVKDISRNTVALDV 648
YL DV ISRNTV D+
Sbjct: 156 YLREDVVLISRNTVKADI 173