BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus22_contig00037394
         (256 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAB10837.1| retroelement pol polyprotein-like [Arabidopsis t...    70   2e-14
gb|AAG09097.1|AC009323_8 Putative retroelement polyprotein [Arab...    70   4e-14
dbj|BAA97099.1| retroelement pol polyprotein-like [Arabidopsis t...    72   9e-13
emb|CAN76645.1| hypothetical protein VITISV_004685 [Vitis vinifera]    69   4e-12
emb|CAN69804.1| hypothetical protein VITISV_017631 [Vitis vinifera]    69   4e-12
emb|CAN73272.1| hypothetical protein VITISV_013115 [Vitis vinifera]    69   5e-12
emb|CAN83015.1| hypothetical protein VITISV_041694 [Vitis vinifera]    69   5e-12
emb|CAN82171.1| hypothetical protein VITISV_040546 [Vitis vinifera]    67   1e-11
gb|AAD19784.1| putative retroelement pol polyprotein [Arabidopsi...    74   2e-11
gb|AAD23883.1| putative retroelement pol polyprotein [Arabidopsi...    74   2e-11
dbj|BAA97287.1| retroelement pol polyprotein-like [Arabidopsis t...    73   4e-11
gb|AAC67205.1| putative retroelement pol polyprotein [Arabidopsi...    73   4e-11
gb|AAG50751.1|AC079733_19 polyprotein, putative [Arabidopsis tha...    62   6e-11
dbj|BAB10743.1| retroelement pol polyprotein-like [Arabidopsis t...    62   6e-11
emb|CAN80919.1| hypothetical protein VITISV_002640 [Vitis vinifera]    64   1e-10
gb|AAG51258.1|AC025782_3 Ty1/copia-element polyprotein [Arabidop...    63   1e-10
emb|CAN74847.1| hypothetical protein VITISV_028741 [Vitis vinifera]    66   2e-10
emb|CAA18107.1| LTR retrotransposon like protein [Arabidopsis th...    60   2e-10
emb|CAN82105.1| hypothetical protein VITISV_002577 [Vitis vinifera]    62   2e-09
emb|CAN65308.1| hypothetical protein VITISV_002323 [Vitis vinifera]    67   2e-09

>dbj|BAB10837.1| retroelement pol polyprotein-like [Arabidopsis thaliana]
          Length = 1462

 Score = 70.5 bits (171), Expect(2) = 2e-14
 Identities = 29/54 (53%), Positives = 42/54 (77%)
 Frame = -3

Query: 164 PISLNNADAPFDLVRCDLWGPYKITSSCGCGAHYFLTIVDDFSRSVWTFLL*EK 3
           P+S N   +PF++V CDLWGPY+ TS   CG++YFLT+VD+++R+VW +LL  K
Sbjct: 515 PLSNNKTSSPFEMVHCDLWGPYRTTSI--CGSNYFLTLVDNYTRAVWLYLLPSK 566



 Score = 33.9 bits (76), Expect(2) = 2e-14
 Identities = 14/26 (53%), Positives = 18/26 (69%)
 Frame = -2

Query: 243 GHSVKSDFLDKCSVCLRAKQTRDPFP 166
           GH+  S     C +C++AKQTRDPFP
Sbjct: 493 GHAFDSK---TCEICIKAKQTRDPFP 515


>gb|AAG09097.1|AC009323_8 Putative retroelement polyprotein [Arabidopsis thaliana]
          Length = 1486

 Score = 70.1 bits (170), Expect(2) = 4e-14
 Identities = 31/54 (57%), Positives = 39/54 (72%)
 Frame = -3

Query: 164 PISLNNADAPFDLVRCDLWGPYKITSSCGCGAHYFLTIVDDFSRSVWTFLL*EK 3
           P+S N     F+LV CDLWGPY+ TS   CG+ YFLT+VDD+SR+VW +LL  K
Sbjct: 551 PLSSNKTSFAFELVHCDLWGPYRTTSI--CGSRYFLTLVDDYSRAVWLYLLPSK 602



 Score = 33.1 bits (74), Expect(2) = 4e-14
 Identities = 11/15 (73%), Positives = 14/15 (93%)
 Frame = -2

Query: 210 CSVCLRAKQTRDPFP 166
           C +C++AKQTRDPFP
Sbjct: 537 CEICIQAKQTRDPFP 551


>dbj|BAA97099.1| retroelement pol polyprotein-like [Arabidopsis thaliana]
          Length = 1098

 Score = 72.4 bits (176), Expect(2) = 9e-13
 Identities = 33/52 (63%), Positives = 40/52 (76%)
 Frame = -3

Query: 158 SLNNADAPFDLVRCDLWGPYKITSSCGCGAHYFLTIVDDFSRSVWTFLL*EK 3
           SLN     F+L+ CD+WGPY+  +SCG  + YFLTIVDDFSRSVWTFL+ EK
Sbjct: 552 SLNKTTVCFELIHCDVWGPYRTPASCG--SVYFLTIVDDFSRSVWTFLMAEK 601



 Score = 26.2 bits (56), Expect(2) = 9e-13
 Identities = 10/27 (37%), Positives = 14/27 (51%)
 Frame = -2

Query: 249 FLGHSVKSDFLDKCSVCLRAKQTRDPF 169
           F   S   + +  C +C RAKQ R+ F
Sbjct: 523 FASSSSDLEIIKSCDICYRAKQAREVF 549


>emb|CAN76645.1| hypothetical protein VITISV_004685 [Vitis vinifera]
          Length = 1196

 Score = 68.9 bits (167), Expect(2) = 4e-12
 Identities = 33/54 (61%), Positives = 39/54 (72%)
 Frame = -3

Query: 164 PISLNNADAPFDLVRCDLWGPYKITSSCGCGAHYFLTIVDDFSRSVWTFLL*EK 3
           P+S N A   F+ + CDLWG YK  SSCG  A YFLTIVDDFSR+VW +LL +K
Sbjct: 439 PLSDNKATRIFEKIHCDLWGSYKHVSSCG--ARYFLTIVDDFSRAVWIYLLVDK 490



 Score = 27.3 bits (59), Expect(2) = 4e-12
 Identities = 10/24 (41%), Positives = 13/24 (54%)
 Frame = -2

Query: 237 SVKSDFLDKCSVCLRAKQTRDPFP 166
           ++K      C +C RAK  RD FP
Sbjct: 416 NLKGSLNKACEICFRAKHPRDKFP 439


>emb|CAN69804.1| hypothetical protein VITISV_017631 [Vitis vinifera]
          Length = 1191

 Score = 68.9 bits (167), Expect(2) = 4e-12
 Identities = 33/54 (61%), Positives = 39/54 (72%)
 Frame = -3

Query: 164 PISLNNADAPFDLVRCDLWGPYKITSSCGCGAHYFLTIVDDFSRSVWTFLL*EK 3
           P+S N A   F+ + CDLWG YK  SSCG  A YFLTIVDDFSR+VW +LL +K
Sbjct: 271 PLSDNKATRIFEKIHCDLWGSYKHVSSCG--ARYFLTIVDDFSRAVWIYLLVDK 322



 Score = 27.3 bits (59), Expect(2) = 4e-12
 Identities = 10/24 (41%), Positives = 13/24 (54%)
 Frame = -2

Query: 237 SVKSDFLDKCSVCLRAKQTRDPFP 166
           ++K      C +C RAK  RD FP
Sbjct: 248 NLKGSLNKACEICFRAKHPRDKFP 271


>emb|CAN73272.1| hypothetical protein VITISV_013115 [Vitis vinifera]
          Length = 1178

 Score = 68.9 bits (167), Expect(2) = 5e-12
 Identities = 33/54 (61%), Positives = 39/54 (72%)
 Frame = -3

Query: 164 PISLNNADAPFDLVRCDLWGPYKITSSCGCGAHYFLTIVDDFSRSVWTFLL*EK 3
           P+S N A   F+ + CDLWG YK  SSCG  A YFLTIVDDFSR+VW +LL +K
Sbjct: 312 PLSDNKATRIFEKIHCDLWGSYKHVSSCG--ARYFLTIVDDFSRAVWIYLLVDK 363



 Score = 27.3 bits (59), Expect(2) = 5e-12
 Identities = 10/24 (41%), Positives = 13/24 (54%)
 Frame = -2

Query: 237 SVKSDFLDKCSVCLRAKQTRDPFP 166
           ++K      C +C RAK  RD FP
Sbjct: 289 NLKGSLNKACEICFRAKHXRDKFP 312


>emb|CAN83015.1| hypothetical protein VITISV_041694 [Vitis vinifera]
          Length = 1099

 Score = 68.9 bits (167), Expect(2) = 5e-12
 Identities = 33/54 (61%), Positives = 39/54 (72%)
 Frame = -3

Query: 164 PISLNNADAPFDLVRCDLWGPYKITSSCGCGAHYFLTIVDDFSRSVWTFLL*EK 3
           P+S N A   F+ + CDLWG YK  SSCG  A YFLTIVDDFSR+VW +LL +K
Sbjct: 226 PLSDNKATRIFEKIHCDLWGSYKHVSSCG--ARYFLTIVDDFSRAVWIYLLVDK 277



 Score = 27.3 bits (59), Expect(2) = 5e-12
 Identities = 10/24 (41%), Positives = 13/24 (54%)
 Frame = -2

Query: 237 SVKSDFLDKCSVCLRAKQTRDPFP 166
           ++K      C +C RAK  RD FP
Sbjct: 203 NLKGSLNKACEICFRAKHPRDKFP 226


>emb|CAN82171.1| hypothetical protein VITISV_040546 [Vitis vinifera]
          Length = 1129

 Score = 66.6 bits (161), Expect(2) = 1e-11
 Identities = 32/54 (59%), Positives = 38/54 (70%)
 Frame = -3

Query: 164 PISLNNADAPFDLVRCDLWGPYKITSSCGCGAHYFLTIVDDFSRSVWTFLL*EK 3
           P+S N A   F+ + CDLW  YK  SSCG  A YFLTIVDDFSR+VW +LL +K
Sbjct: 307 PLSDNKATRIFEKIHCDLWASYKHVSSCG--ARYFLTIVDDFSRAVWIYLLVDK 358



 Score = 28.1 bits (61), Expect(2) = 1e-11
 Identities = 10/24 (41%), Positives = 13/24 (54%)
 Frame = -2

Query: 237 SVKSDFLDKCSVCLRAKQTRDPFP 166
           ++K      C +C RAK  RD FP
Sbjct: 284 NIKGSLNKACEICFRAKHPRDKFP 307


>gb|AAD19784.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1501

 Score = 74.3 bits (181), Expect = 2e-11
 Identities = 34/66 (51%), Positives = 46/66 (69%)
 Frame = -3

Query: 200 VCGLSRPVILFLPISLNNADAPFDLVRCDLWGPYKITSSCGCGAHYFLTIVDDFSRSVWT 21
           VC  ++      P S+N  +  F L+ CD+WGPY++ +SCG  A YFLTIVDD+SR+VWT
Sbjct: 562 VCFRAKQTREVFPESINKTEECFSLIHCDVWGPYRVPASCG--AVYFLTIVDDYSRAVWT 619

Query: 20  FLL*EK 3
           +LL EK
Sbjct: 620 YLLLEK 625


>gb|AAD23883.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1156

 Score = 73.9 bits (180), Expect = 2e-11
 Identities = 34/63 (53%), Positives = 44/63 (69%)
 Frame = -3

Query: 200 VCGLSRPVILFLPISLNNADAPFDLVRCDLWGPYKITSSCGCGAHYFLTIVDDFSRSVWT 21
           VC  ++      P+S N +   F L+ CD+WGPY++ SSCG  A YFLTIVDDFSR+VWT
Sbjct: 123 VCFRAKQTREVFPVSTNKSIECFSLIHCDVWGPYRVPSSCG--AVYFLTIVDDFSRAVWT 180

Query: 20  FLL 12
           +LL
Sbjct: 181 YLL 183


>dbj|BAA97287.1| retroelement pol polyprotein-like [Arabidopsis thaliana]
          Length = 1491

 Score = 72.8 bits (177), Expect = 4e-11
 Identities = 35/63 (55%), Positives = 43/63 (68%)
 Frame = -3

Query: 200 VCGLSRPVILFLPISLNNADAPFDLVRCDLWGPYKITSSCGCGAHYFLTIVDDFSRSVWT 21
           VC  ++      P S N +   F L+ CD+WGPY++ SSCG  A YFLTIVDDFSRSVWT
Sbjct: 545 VCFRAKQTREVFPDSSNKSTDCFSLIHCDVWGPYRVPSSCG--AVYFLTIVDDFSRSVWT 602

Query: 20  FLL 12
           +LL
Sbjct: 603 YLL 605


>gb|AAC67205.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1413

 Score = 72.8 bits (177), Expect = 4e-11
 Identities = 35/63 (55%), Positives = 43/63 (68%)
 Frame = -3

Query: 200 VCGLSRPVILFLPISLNNADAPFDLVRCDLWGPYKITSSCGCGAHYFLTIVDDFSRSVWT 21
           VC  ++      P S N +   F L+ CD+WGPY++ SSCG  A YFLTIVDDFSRSVWT
Sbjct: 545 VCFRAKQTREVFPDSSNKSTDCFSLIHCDVWGPYRVPSSCG--AVYFLTIVDDFSRSVWT 602

Query: 20  FLL 12
           +LL
Sbjct: 603 YLL 605


>gb|AAG50751.1|AC079733_19 polyprotein, putative [Arabidopsis thaliana]
          Length = 1468

 Score = 62.0 bits (149), Expect(2) = 6e-11
 Identities = 28/54 (51%), Positives = 37/54 (68%)
 Frame = -3

Query: 164 PISLNNADAPFDLVRCDLWGPYKITSSCGCGAHYFLTIVDDFSRSVWTFLL*EK 3
           P+S N +   F L+ CD+WGPY+  S  G  A YFLTIVDD+SR VW +L+ +K
Sbjct: 561 PLSDNRSMDSFQLIHCDVWGPYRAPSYSG--ARYFLTIVDDYSRGVWVYLMTDK 612



 Score = 30.4 bits (67), Expect(2) = 6e-11
 Identities = 11/15 (73%), Positives = 12/15 (80%)
 Frame = -2

Query: 210 CSVCLRAKQTRDPFP 166
           C  C+RAKQTRD FP
Sbjct: 547 CDTCMRAKQTRDTFP 561


>dbj|BAB10743.1| retroelement pol polyprotein-like [Arabidopsis thaliana]
          Length = 1109

 Score = 62.0 bits (149), Expect(2) = 6e-11
 Identities = 28/54 (51%), Positives = 37/54 (68%)
 Frame = -3

Query: 164 PISLNNADAPFDLVRCDLWGPYKITSSCGCGAHYFLTIVDDFSRSVWTFLL*EK 3
           P+S N +   F L+ CD+WGPY+  S  G  A YFLTIVDD+SR VW +L+ +K
Sbjct: 337 PLSDNRSMDSFQLIHCDVWGPYRTPSYSG--ARYFLTIVDDYSRGVWVYLMTDK 388



 Score = 30.4 bits (67), Expect(2) = 6e-11
 Identities = 11/15 (73%), Positives = 12/15 (80%)
 Frame = -2

Query: 210 CSVCLRAKQTRDPFP 166
           C  C+RAKQTRD FP
Sbjct: 323 CDTCMRAKQTRDTFP 337


>emb|CAN80919.1| hypothetical protein VITISV_002640 [Vitis vinifera]
          Length = 1450

 Score = 64.3 bits (155), Expect(2) = 1e-10
 Identities = 30/54 (55%), Positives = 37/54 (68%)
 Frame = -3

Query: 164 PISLNNADAPFDLVRCDLWGPYKITSSCGCGAHYFLTIVDDFSRSVWTFLL*EK 3
           P++ N A   F+ + CDLWG YK  SSC   A YFLTI+DDFSR+VW +LL  K
Sbjct: 559 PLTDNKATRIFEKIHCDLWGSYKHVSSCA--ARYFLTIIDDFSRAVWIYLLVNK 610



 Score = 27.3 bits (59), Expect(2) = 1e-10
 Identities = 10/24 (41%), Positives = 13/24 (54%)
 Frame = -2

Query: 237 SVKSDFLDKCSVCLRAKQTRDPFP 166
           ++K      C +C RAK  RD FP
Sbjct: 536 NLKGSLNKACEICFRAKHPRDKFP 559


>gb|AAG51258.1|AC025782_3 Ty1/copia-element polyprotein [Arabidopsis thaliana]
          Length = 1152

 Score = 62.8 bits (151), Expect(2) = 1e-10
 Identities = 29/49 (59%), Positives = 34/49 (69%)
 Frame = -3

Query: 158 SLNNADAPFDLVRCDLWGPYKITSSCGCGAHYFLTIVDDFSRSVWTFLL 12
           S N A+  F  +  D+WGPYK  SSCG  AHYFLTIVDD SR+VW  L+
Sbjct: 563 SFNKAEECFSFIHYDVWGPYKHASSCG--AHYFLTIVDDHSRAVWIHLM 609



 Score = 28.5 bits (62), Expect(2) = 1e-10
 Identities = 13/23 (56%), Positives = 14/23 (60%)
 Frame = -2

Query: 237 SVKSDFLDKCSVCLRAKQTRDPF 169
           S  SD    C VC+RAKQTR  F
Sbjct: 538 SCSSDLKTICDVCVRAKQTRASF 560


>emb|CAN74847.1| hypothetical protein VITISV_028741 [Vitis vinifera]
          Length = 1262

 Score = 66.2 bits (160), Expect(2) = 2e-10
 Identities = 32/53 (60%), Positives = 38/53 (71%)
 Frame = -3

Query: 161 ISLNNADAPFDLVRCDLWGPYKITSSCGCGAHYFLTIVDDFSRSVWTFLL*EK 3
           +S N A   F+ + CDLWG YK  SSCG  A YFLTIVDDFSR+VW +LL +K
Sbjct: 559 LSDNKATRIFEKIHCDLWGSYKHVSSCG--ARYFLTIVDDFSRAVWIYLLVDK 609



 Score = 24.6 bits (52), Expect(2) = 2e-10
 Identities = 9/23 (39%), Positives = 12/23 (52%)
 Frame = -2

Query: 237 SVKSDFLDKCSVCLRAKQTRDPF 169
           ++K      C +C RAK  RD F
Sbjct: 535 NLKGSLNKACEICFRAKHPRDKF 557


>emb|CAA18107.1| LTR retrotransposon like protein [Arabidopsis thaliana]
           gi|7269049|emb|CAB79159.1| LTR retrotransposon like
           protein [Arabidopsis thaliana]
          Length = 1109

 Score = 60.1 bits (144), Expect(2) = 2e-10
 Identities = 27/54 (50%), Positives = 36/54 (66%)
 Frame = -3

Query: 164 PISLNNADAPFDLVRCDLWGPYKITSSCGCGAHYFLTIVDDFSRSVWTFLL*EK 3
           P+  N +   F L+ CD+WGPY+  S  G  A YFLTIVDD+SR VW +L+ +K
Sbjct: 337 PLRDNRSMDSFQLIHCDVWGPYRTPSYSG--ARYFLTIVDDYSRGVWVYLMTDK 388



 Score = 30.4 bits (67), Expect(2) = 2e-10
 Identities = 11/15 (73%), Positives = 12/15 (80%)
 Frame = -2

Query: 210 CSVCLRAKQTRDPFP 166
           C  C+RAKQTRD FP
Sbjct: 323 CDTCMRAKQTRDTFP 337


>emb|CAN82105.1| hypothetical protein VITISV_002577 [Vitis vinifera]
          Length = 1109

 Score = 62.4 bits (150), Expect(2) = 2e-09
 Identities = 29/50 (58%), Positives = 35/50 (70%)
 Frame = -3

Query: 152 NNADAPFDLVRCDLWGPYKITSSCGCGAHYFLTIVDDFSRSVWTFLL*EK 3
           N A   FDL+ CDLWG Y++ +S  CG  YFLTIVDD SR+VW +LL  K
Sbjct: 374 NKAKECFDLIHCDLWGAYRVPAS--CGGIYFLTIVDDCSRAVWIYLLNRK 421



 Score = 24.6 bits (52), Expect(2) = 2e-09
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = -2

Query: 210 CSVCLRAKQTRDPF 169
           C +C RA+QTR+ F
Sbjct: 356 CDICFRAQQTREMF 369


>emb|CAN65308.1| hypothetical protein VITISV_002323 [Vitis vinifera]
          Length = 1114

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 32/66 (48%), Positives = 43/66 (65%)
 Frame = -3

Query: 200 VCGLSRPVILFLPISLNNADAPFDLVRCDLWGPYKITSSCGCGAHYFLTIVDDFSRSVWT 21
           VC L++   L + +S  ++  PF+L+ CD+WGPYKI S    GA YFLTIVDD+SR  W 
Sbjct: 428 VCALAKQRRLPISVSSISSVRPFELIHCDIWGPYKIASL--SGAKYFLTIVDDYSRFTWV 485

Query: 20  FLL*EK 3
           F +  K
Sbjct: 486 FFMHHK 491