BLASTX nr result

ID: Catharanthus22_contig00037125 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus22_contig00037125
         (306 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002535451.1| conserved hypothetical protein [Ricinus comm...   117   2e-24
ref|XP_002523280.1| conserved hypothetical protein [Ricinus comm...    76   5e-12
ref|XP_006837223.1| hypothetical protein AMTR_s00105p00134620 [A...    59   5e-07
gb|EXB55384.1| hypothetical protein L484_016751 [Morus notabilis]      57   2e-06

>ref|XP_002535451.1| conserved hypothetical protein [Ricinus communis]
           gi|223523062|gb|EEF26930.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 115

 Score =  117 bits (292), Expect = 2e-24
 Identities = 56/59 (94%), Positives = 56/59 (94%)
 Frame = -3

Query: 178 RGVSTSLARGWDSFTCIPASTTKSSGLNNPTTAVQPFLGFVESGFPFTHNGGTAPTRQA 2
           RGVSTSLARGWDSFTCIPASTTKSSGLN  TTAVQPFLGFVESGFPFTHNGG APTRQA
Sbjct: 20  RGVSTSLARGWDSFTCIPASTTKSSGLNALTTAVQPFLGFVESGFPFTHNGGAAPTRQA 78


>ref|XP_002523280.1| conserved hypothetical protein [Ricinus communis]
           gi|223537493|gb|EEF39119.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 77

 Score = 75.9 bits (185), Expect = 5e-12
 Identities = 37/45 (82%), Positives = 38/45 (84%)
 Frame = -3

Query: 175 GVSTSLARGWDSFTCIPASTTKSSGLNNPTTAVQPFLGFVESGFP 41
           G STSLARGWDSFTCI ASTTKSS LN  TT VQPFL F+ESGFP
Sbjct: 24  GRSTSLARGWDSFTCISASTTKSSSLNALTTLVQPFLEFIESGFP 68


>ref|XP_006837223.1| hypothetical protein AMTR_s00105p00134620 [Amborella trichopoda]
           gi|548839820|gb|ERN00077.1| hypothetical protein
           AMTR_s00105p00134620 [Amborella trichopoda]
          Length = 78

 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 27/33 (81%), Positives = 28/33 (84%)
 Frame = +3

Query: 15  GAVPPLWVNGKPDSTNPRKGCTAVVGLLRPELF 113
           GA PPL VNGKPDSTNPRKG   VVG+LRPELF
Sbjct: 10  GAAPPLRVNGKPDSTNPRKGSATVVGVLRPELF 42


>gb|EXB55384.1| hypothetical protein L484_016751 [Morus notabilis]
          Length = 91

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 25/26 (96%), Positives = 25/26 (96%)
 Frame = -3

Query: 79  VQPFLGFVESGFPFTHNGGTAPTRQA 2
           VQPFLGFVESGFPFTHNGG APTRQA
Sbjct: 44  VQPFLGFVESGFPFTHNGGAAPTRQA 69


Top