BLASTX nr result
ID: Catharanthus22_contig00037020
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus22_contig00037020
(328 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAB87099.1| putative retroelement pol polyprotein [Arabidopsi... 166 2e-39
gb|AAM98191.1| unknown protein [Arabidopsis thaliana] gi|3860380... 166 2e-39
dbj|BAB10743.1| retroelement pol polyprotein-like [Arabidopsis t... 165 7e-39
emb|CAA18107.1| LTR retrotransposon like protein [Arabidopsis th... 165 7e-39
gb|AAG50751.1|AC079733_19 polyprotein, putative [Arabidopsis tha... 165 7e-39
dbj|BAA97287.1| retroelement pol polyprotein-like [Arabidopsis t... 159 4e-37
gb|AAC67205.1| putative retroelement pol polyprotein [Arabidopsi... 159 4e-37
gb|AAG09097.1|AC009323_8 Putative retroelement polyprotein [Arab... 159 5e-37
gb|AAD24600.1| putative retroelement pol polyprotein [Arabidopsi... 159 5e-37
emb|CAN61658.1| hypothetical protein VITISV_040310 [Vitis vinifera] 156 2e-36
dbj|BAB10837.1| retroelement pol polyprotein-like [Arabidopsis t... 156 2e-36
emb|CAN73272.1| hypothetical protein VITISV_013115 [Vitis vinifera] 155 4e-36
emb|CAN80919.1| hypothetical protein VITISV_002640 [Vitis vinifera] 155 5e-36
gb|AAG51258.1|AC025782_3 Ty1/copia-element polyprotein [Arabidop... 154 9e-36
emb|CAN82171.1| hypothetical protein VITISV_040546 [Vitis vinifera] 154 2e-35
emb|CAN83015.1| hypothetical protein VITISV_041694 [Vitis vinifera] 153 2e-35
gb|AAD19784.1| putative retroelement pol polyprotein [Arabidopsi... 153 2e-35
emb|CAN69804.1| hypothetical protein VITISV_017631 [Vitis vinifera] 153 3e-35
gb|AAD23883.1| putative retroelement pol polyprotein [Arabidopsi... 152 3e-35
emb|CAN76645.1| hypothetical protein VITISV_004685 [Vitis vinifera] 148 6e-34
>gb|AAB87099.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1496
Score = 166 bits (421), Expect = 2e-39
Identities = 79/109 (72%), Positives = 91/109 (83%)
Frame = +1
Query: 1 YKARLVVLDNTQHEGVDYTETFAPVAKMVTIRTMLSVAAAHRWEVHQMDVHNAFLHGDPT 180
+KARLVV+ N Q EGVD+ ETFAPVAK+ T+RT+L+VAAA WEVHQMDVHNAFLHGD
Sbjct: 1047 HKARLVVMGNHQKEGVDFKETFAPVAKLTTVRTILAVAAAKDWEVHQMDVHNAFLHGDLE 1106
Query: 181 EEVYIKLPPGFHTSDPWKVCHLNKSLYGLQQAPRYWFSKLTASLRQCGF 327
EEVY++LPPGF SDP KVC L KSLYGL+QAPR WFSKL+ +LR GF
Sbjct: 1107 EEVYMRLPPGFKCSDPSKVCRLRKSLYGLKQAPRCWFSKLSTALRNIGF 1155
>gb|AAM98191.1| unknown protein [Arabidopsis thaliana] gi|38603804|gb|AAR24647.1|
At2g23330 [Arabidopsis thaliana]
gi|110742535|dbj|BAE99183.1| putative retroelement pol
polyprotein [Arabidopsis thaliana]
Length = 776
Score = 166 bits (421), Expect = 2e-39
Identities = 79/109 (72%), Positives = 91/109 (83%)
Frame = +1
Query: 1 YKARLVVLDNTQHEGVDYTETFAPVAKMVTIRTMLSVAAAHRWEVHQMDVHNAFLHGDPT 180
+KARLVV+ N Q EGVD+ ETFAPVAK+ T+RT+L+VAAA WEVHQMDVHNAFLHGD
Sbjct: 327 HKARLVVMGNHQKEGVDFKETFAPVAKLTTVRTILAVAAAKDWEVHQMDVHNAFLHGDLE 386
Query: 181 EEVYIKLPPGFHTSDPWKVCHLNKSLYGLQQAPRYWFSKLTASLRQCGF 327
EEVY++LPPGF SDP KVC L KSLYGL+QAPR WFSKL+ +LR GF
Sbjct: 387 EEVYMRLPPGFKCSDPSKVCRLRKSLYGLKQAPRCWFSKLSTALRNIGF 435
>dbj|BAB10743.1| retroelement pol polyprotein-like [Arabidopsis thaliana]
Length = 1109
Score = 165 bits (417), Expect = 7e-39
Identities = 80/109 (73%), Positives = 88/109 (80%)
Frame = +1
Query: 1 YKARLVVLDNTQHEGVDYTETFAPVAKMVTIRTMLSVAAAHRWEVHQMDVHNAFLHGDPT 180
YKARLVVL N Q EGVDY ETFAPVAKM T+R L VAAA W VHQMDVHNAFLHGD
Sbjct: 660 YKARLVVLGNCQKEGVDYDETFAPVAKMSTVRLFLGVAAARDWHVHQMDVHNAFLHGDLK 719
Query: 181 EEVYIKLPPGFHTSDPWKVCHLNKSLYGLQQAPRYWFSKLTASLRQCGF 327
EEVY+KLP GF DP KVC L+KSLYGL+QAPR WFSKL+++L+Q GF
Sbjct: 720 EEVYMKLPQGFQCDDPSKVCRLHKSLYGLKQAPRCWFSKLSSALKQYGF 768
>emb|CAA18107.1| LTR retrotransposon like protein [Arabidopsis thaliana]
gi|7269049|emb|CAB79159.1| LTR retrotransposon like
protein [Arabidopsis thaliana]
Length = 1109
Score = 165 bits (417), Expect = 7e-39
Identities = 80/109 (73%), Positives = 88/109 (80%)
Frame = +1
Query: 1 YKARLVVLDNTQHEGVDYTETFAPVAKMVTIRTMLSVAAAHRWEVHQMDVHNAFLHGDPT 180
YKARLVVL N Q EGVDY ETFAPVAKM T+R L VAAA W VHQMDVHNAFLHGD
Sbjct: 660 YKARLVVLGNCQKEGVDYDETFAPVAKMSTVRLFLGVAAARDWHVHQMDVHNAFLHGDLK 719
Query: 181 EEVYIKLPPGFHTSDPWKVCHLNKSLYGLQQAPRYWFSKLTASLRQCGF 327
EEVY+KLP GF DP KVC L+KSLYGL+QAPR WFSKL+++L+Q GF
Sbjct: 720 EEVYMKLPQGFQCDDPSKVCRLHKSLYGLKQAPRCWFSKLSSALKQYGF 768
>gb|AAG50751.1|AC079733_19 polyprotein, putative [Arabidopsis thaliana]
Length = 1468
Score = 165 bits (417), Expect = 7e-39
Identities = 80/109 (73%), Positives = 88/109 (80%)
Frame = +1
Query: 1 YKARLVVLDNTQHEGVDYTETFAPVAKMVTIRTMLSVAAAHRWEVHQMDVHNAFLHGDPT 180
YKARLVVL N Q EGVDY ETFAPVAKM T+R L VAAA W VHQMDVHNAFLHGD
Sbjct: 1019 YKARLVVLGNCQKEGVDYDETFAPVAKMSTVRLFLGVAAARDWHVHQMDVHNAFLHGDLK 1078
Query: 181 EEVYIKLPPGFHTSDPWKVCHLNKSLYGLQQAPRYWFSKLTASLRQCGF 327
EEVY+KLP GF DP KVC L+KSLYGL+QAPR WFSKL+++L+Q GF
Sbjct: 1079 EEVYMKLPQGFQCDDPSKVCRLHKSLYGLKQAPRCWFSKLSSALKQYGF 1127
>dbj|BAA97287.1| retroelement pol polyprotein-like [Arabidopsis thaliana]
Length = 1491
Score = 159 bits (402), Expect = 4e-37
Identities = 76/109 (69%), Positives = 88/109 (80%)
Frame = +1
Query: 1 YKARLVVLDNTQHEGVDYTETFAPVAKMVTIRTMLSVAAAHRWEVHQMDVHNAFLHGDPT 180
YKARLVV N Q EG DYTETFAPV KM T+RT+L + AA++WEV+QMDVHNAFLHGD
Sbjct: 1042 YKARLVVQGNNQIEGEDYTETFAPVVKMTTVRTLLRLVAANQWEVYQMDVHNAFLHGDLE 1101
Query: 181 EEVYIKLPPGFHTSDPWKVCHLNKSLYGLQQAPRYWFSKLTASLRQCGF 327
EEVY+KLPPGF S P KVC L KSLYGL+QAPR WF KL+ +L++ GF
Sbjct: 1102 EEVYMKLPPGFRHSHPDKVCRLRKSLYGLKQAPRCWFKKLSDALKRFGF 1150
>gb|AAC67205.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1413
Score = 159 bits (402), Expect = 4e-37
Identities = 76/109 (69%), Positives = 88/109 (80%)
Frame = +1
Query: 1 YKARLVVLDNTQHEGVDYTETFAPVAKMVTIRTMLSVAAAHRWEVHQMDVHNAFLHGDPT 180
YKARLVV N Q EG DYTETFAPV KM T+RT+L + AA++WEV+QMDVHNAFLHGD
Sbjct: 1042 YKARLVVQGNNQIEGEDYTETFAPVVKMTTVRTLLRLVAANQWEVYQMDVHNAFLHGDLE 1101
Query: 181 EEVYIKLPPGFHTSDPWKVCHLNKSLYGLQQAPRYWFSKLTASLRQCGF 327
EEVY+KLPPGF S P KVC L KSLYGL+QAPR WF KL+ +L++ GF
Sbjct: 1102 EEVYMKLPPGFRHSHPDKVCRLRKSLYGLKQAPRCWFKKLSDALKRFGF 1150
>gb|AAG09097.1|AC009323_8 Putative retroelement polyprotein [Arabidopsis thaliana]
Length = 1486
Score = 159 bits (401), Expect = 5e-37
Identities = 75/109 (68%), Positives = 86/109 (78%)
Frame = +1
Query: 1 YKARLVVLDNTQHEGVDYTETFAPVAKMVTIRTMLSVAAAHRWEVHQMDVHNAFLHGDPT 180
+KARLVVL N Q EG+DYTETFAPVAKMVT+R L + WEVHQMDVHNAFLHGD
Sbjct: 1037 HKARLVVLGNNQTEGLDYTETFAPVAKMVTVRAFLQQVVSLDWEVHQMDVHNAFLHGDLD 1096
Query: 181 EEVYIKLPPGFHTSDPWKVCHLNKSLYGLQQAPRYWFSKLTASLRQCGF 327
EEVY++ PPGF T D KVC L KSLYGL+QAPR WF+KLT++L+ GF
Sbjct: 1097 EEVYMQFPPGFRTGDKTKVCRLRKSLYGLKQAPRCWFAKLTSALKNYGF 1145
>gb|AAD24600.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1333
Score = 159 bits (401), Expect = 5e-37
Identities = 75/109 (68%), Positives = 83/109 (76%)
Frame = +1
Query: 1 YKARLVVLDNTQHEGVDYTETFAPVAKMVTIRTMLSVAAAHRWEVHQMDVHNAFLHGDPT 180
YKARLV L N Q EG DY ETFAPVAKM T+R L VA WE+HQMDVHNAFLHGD
Sbjct: 884 YKARLVALGNKQKEGEDYGETFAPVAKMATVRLFLDVAVKRNWEIHQMDVHNAFLHGDLR 943
Query: 181 EEVYIKLPPGFHTSDPWKVCHLNKSLYGLQQAPRYWFSKLTASLRQCGF 327
EEVY+KLPPGF S P KVC L K+LYGL+QAPR WF KLT +L++ GF
Sbjct: 944 EEVYMKLPPGFEASHPNKVCRLRKALYGLKQAPRCWFEKLTTALKRYGF 992
>emb|CAN61658.1| hypothetical protein VITISV_040310 [Vitis vinifera]
Length = 1461
Score = 156 bits (395), Expect = 2e-36
Identities = 73/108 (67%), Positives = 86/108 (79%)
Frame = +1
Query: 4 KARLVVLDNTQHEGVDYTETFAPVAKMVTIRTMLSVAAAHRWEVHQMDVHNAFLHGDPTE 183
K+RLVVL N Q G+DY ETF+PVAKM T+RT L++AA+ WE+HQMDVHNAFLHGD E
Sbjct: 1013 KSRLVVLGNHQEAGIDYHETFSPVAKMTTVRTFLAIAASKNWELHQMDVHNAFLHGDLEE 1072
Query: 184 EVYIKLPPGFHTSDPWKVCHLNKSLYGLQQAPRYWFSKLTASLRQCGF 327
EVY+KLPPGF SDP VC L KSLYGL+QAPR WF+KL +L+ GF
Sbjct: 1073 EVYMKLPPGFERSDPNLVCRLRKSLYGLKQAPRCWFAKLVTALKGYGF 1120
>dbj|BAB10837.1| retroelement pol polyprotein-like [Arabidopsis thaliana]
Length = 1462
Score = 156 bits (395), Expect = 2e-36
Identities = 75/109 (68%), Positives = 85/109 (77%)
Frame = +1
Query: 1 YKARLVVLDNTQHEGVDYTETFAPVAKMVTIRTMLSVAAAHRWEVHQMDVHNAFLHGDPT 180
+KARLVVL N Q EG+DY+ETFAPVAKMVT+R L A+ WEVHQMDVHNAFLHGD
Sbjct: 999 HKARLVVLGNKQTEGIDYSETFAPVAKMVTVRAFLQQVASLDWEVHQMDVHNAFLHGDLD 1058
Query: 181 EEVYIKLPPGFHTSDPWKVCHLNKSLYGLQQAPRYWFSKLTASLRQCGF 327
EEVYIK PPGF + D KVC L K+LYGL+QAPR WF+KLT +L GF
Sbjct: 1059 EEVYIKFPPGFGSDDNRKVCRLRKALYGLKQAPRCWFAKLTTALNDYGF 1107
>emb|CAN73272.1| hypothetical protein VITISV_013115 [Vitis vinifera]
Length = 1178
Score = 155 bits (393), Expect = 4e-36
Identities = 73/108 (67%), Positives = 85/108 (78%)
Frame = +1
Query: 4 KARLVVLDNTQHEGVDYTETFAPVAKMVTIRTMLSVAAAHRWEVHQMDVHNAFLHGDPTE 183
K+RLVVL N Q G+DY ETF+PVAKM T+R L++AA+ WE+HQMDVHNAFLHGD E
Sbjct: 730 KSRLVVLGNHQEAGIDYHETFSPVAKMTTVRAFLAIAASKNWELHQMDVHNAFLHGDLEE 789
Query: 184 EVYIKLPPGFHTSDPWKVCHLNKSLYGLQQAPRYWFSKLTASLRQCGF 327
EVY+KLPPGF SDP VC L KSLYGL+QAPR WFSKL +L+ GF
Sbjct: 790 EVYMKLPPGFERSDPNLVCRLRKSLYGLKQAPRCWFSKLVTALKGYGF 837
>emb|CAN80919.1| hypothetical protein VITISV_002640 [Vitis vinifera]
Length = 1450
Score = 155 bits (392), Expect = 5e-36
Identities = 72/108 (66%), Positives = 86/108 (79%)
Frame = +1
Query: 4 KARLVVLDNTQHEGVDYTETFAPVAKMVTIRTMLSVAAAHRWEVHQMDVHNAFLHGDPTE 183
K+RLVVL N Q G+DY ETF+PVAKM T+R L++AA+ WE+HQMDVHNAFLHGD E
Sbjct: 1013 KSRLVVLGNHQEAGIDYHETFSPVAKMTTVRAFLAIAASKNWELHQMDVHNAFLHGDLEE 1072
Query: 184 EVYIKLPPGFHTSDPWKVCHLNKSLYGLQQAPRYWFSKLTASLRQCGF 327
EVY+KLPPGF +SDP VC L KSLYGL+QAPR WF+KL +L+ GF
Sbjct: 1073 EVYMKLPPGFESSDPNLVCRLRKSLYGLKQAPRCWFAKLVTALKGYGF 1120
>gb|AAG51258.1|AC025782_3 Ty1/copia-element polyprotein [Arabidopsis thaliana]
Length = 1152
Score = 154 bits (390), Expect = 9e-36
Identities = 72/109 (66%), Positives = 86/109 (78%)
Frame = +1
Query: 1 YKARLVVLDNTQHEGVDYTETFAPVAKMVTIRTMLSVAAAHRWEVHQMDVHNAFLHGDPT 180
YKARLV L N Q EG+D+T+TFAPV KM T+R +L VAAA WE+HQMDVHNAFLHGD
Sbjct: 995 YKARLVALGNHQKEGIDFTKTFAPVVKMQTVRLLLDVAAAKDWELHQMDVHNAFLHGDLK 1054
Query: 181 EEVYIKLPPGFHTSDPWKVCHLNKSLYGLQQAPRYWFSKLTASLRQCGF 327
E++Y+K PPGF T+DP VC L KS+YGL+QAPR WF KL+ SL + GF
Sbjct: 1055 EDIYMKPPPGFKTTDPSLVCKLKKSIYGLKQAPRCWFEKLSTSLLKFGF 1103
>emb|CAN82171.1| hypothetical protein VITISV_040546 [Vitis vinifera]
Length = 1129
Score = 154 bits (388), Expect = 2e-35
Identities = 72/108 (66%), Positives = 86/108 (79%)
Frame = +1
Query: 4 KARLVVLDNTQHEGVDYTETFAPVAKMVTIRTMLSVAAAHRWEVHQMDVHNAFLHGDPTE 183
K+RLVVL N Q G+DY ETF+PVAKM T+R L++AA+ WE+HQMDVHNAFLHGD E
Sbjct: 681 KSRLVVLGNHQEAGIDYHETFSPVAKMTTVRAFLAIAASKNWELHQMDVHNAFLHGDLEE 740
Query: 184 EVYIKLPPGFHTSDPWKVCHLNKSLYGLQQAPRYWFSKLTASLRQCGF 327
EVY+KLPPGF +SDP VC L KSLYGL+QAPR WF+KL +L+ GF
Sbjct: 741 EVYMKLPPGFESSDPNLVCRLWKSLYGLKQAPRCWFAKLVTALKGYGF 788
>emb|CAN83015.1| hypothetical protein VITISV_041694 [Vitis vinifera]
Length = 1099
Score = 153 bits (387), Expect = 2e-35
Identities = 72/108 (66%), Positives = 84/108 (77%)
Frame = +1
Query: 4 KARLVVLDNTQHEGVDYTETFAPVAKMVTIRTMLSVAAAHRWEVHQMDVHNAFLHGDPTE 183
K+RLVVL N Q G+DY ETF+PVAKM +R L++AA+ WE+HQMDVHNAFLHGD E
Sbjct: 651 KSRLVVLGNHQEAGIDYHETFSPVAKMTMVRAFLAIAASKNWELHQMDVHNAFLHGDLEE 710
Query: 184 EVYIKLPPGFHTSDPWKVCHLNKSLYGLQQAPRYWFSKLTASLRQCGF 327
EVY+KLPPGF SDP VC L KSLYGL+QAPR WFSKL +L+ GF
Sbjct: 711 EVYMKLPPGFERSDPNLVCRLRKSLYGLKQAPRCWFSKLVTALKGYGF 758
>gb|AAD19784.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1501
Score = 153 bits (387), Expect = 2e-35
Identities = 75/109 (68%), Positives = 85/109 (77%)
Frame = +1
Query: 1 YKARLVVLDNTQHEGVDYTETFAPVAKMVTIRTMLSVAAAHRWEVHQMDVHNAFLHGDPT 180
YKARLVV N Q EG DY ETFAPV +M T+RT+L AA++WEV+QMDVHNAFLHGD
Sbjct: 1052 YKARLVVQGNKQVEGEDYKETFAPVVRMTTVRTLLRNVAANQWEVYQMDVHNAFLHGDLE 1111
Query: 181 EEVYIKLPPGFHTSDPWKVCHLNKSLYGLQQAPRYWFSKLTASLRQCGF 327
EEVY+KLPPGF S P KVC L KSLYGL+QAPR WF KL+ SL + GF
Sbjct: 1112 EEVYMKLPPGFRHSHPDKVCRLRKSLYGLKQAPRCWFKKLSDSLLRFGF 1160
>emb|CAN69804.1| hypothetical protein VITISV_017631 [Vitis vinifera]
Length = 1191
Score = 153 bits (386), Expect = 3e-35
Identities = 71/108 (65%), Positives = 85/108 (78%)
Frame = +1
Query: 4 KARLVVLDNTQHEGVDYTETFAPVAKMVTIRTMLSVAAAHRWEVHQMDVHNAFLHGDPTE 183
K+RLVVL N Q G+DY ETF+PVAKM T+R L++AA+ WE+HQMDVHNAF HGD E
Sbjct: 725 KSRLVVLGNHQEAGIDYHETFSPVAKMTTVRAFLAIAASKNWELHQMDVHNAFSHGDLEE 784
Query: 184 EVYIKLPPGFHTSDPWKVCHLNKSLYGLQQAPRYWFSKLTASLRQCGF 327
EVY+KLPPGF +SDP VC L KSLYGL+QAPR WF+KL +L+ GF
Sbjct: 785 EVYMKLPPGFESSDPNLVCRLRKSLYGLKQAPRCWFAKLVTALKGYGF 832
>gb|AAD23883.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1156
Score = 152 bits (385), Expect = 3e-35
Identities = 74/109 (67%), Positives = 86/109 (78%)
Frame = +1
Query: 1 YKARLVVLDNTQHEGVDYTETFAPVAKMVTIRTMLSVAAAHRWEVHQMDVHNAFLHGDPT 180
YKARLVV N Q EG DY ETFAPV KM T+RT+L + AA++WEV+QMDV+NAFLHGD
Sbjct: 699 YKARLVVQGNKQVEGEDYNETFAPVVKMTTVRTLLRLVAANQWEVYQMDVNNAFLHGDLD 758
Query: 181 EEVYIKLPPGFHTSDPWKVCHLNKSLYGLQQAPRYWFSKLTASLRQCGF 327
EEVY+KLPPGF S P KVC L KSLYGL+QAPR WF KL+ +L + GF
Sbjct: 759 EEVYMKLPPGFRHSHPDKVCRLRKSLYGLKQAPRCWFKKLSDALLRFGF 807
>emb|CAN76645.1| hypothetical protein VITISV_004685 [Vitis vinifera]
Length = 1196
Score = 148 bits (374), Expect = 6e-34
Identities = 69/108 (63%), Positives = 82/108 (75%)
Frame = +1
Query: 4 KARLVVLDNTQHEGVDYTETFAPVAKMVTIRTMLSVAAAHRWEVHQMDVHNAFLHGDPTE 183
K RLVVL N Q +DY ETF+P+AKM T+R L++AA+ WE+HQMDVHNAFLHGD E
Sbjct: 857 KYRLVVLGNHQEADIDYHETFSPIAKMTTVRAFLAIAASKNWELHQMDVHNAFLHGDLEE 916
Query: 184 EVYIKLPPGFHTSDPWKVCHLNKSLYGLQQAPRYWFSKLTASLRQCGF 327
EVY+KLPPGF + DP VC L KSLYGL+QAPR WF+KL L+ GF
Sbjct: 917 EVYMKLPPGFESXDPNLVCRLRKSLYGLKQAPRCWFAKLVTXLKGYGF 964