BLASTX nr result
ID: Catharanthus22_contig00036920
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus22_contig00036920
(562 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
dbj|BAA97099.1| retroelement pol polyprotein-like [Arabidopsis t... 83 4e-14
emb|CAN73437.1| hypothetical protein VITISV_031733 [Vitis vinifera] 68 5e-14
emb|CAN82105.1| hypothetical protein VITISV_002577 [Vitis vinifera] 82 1e-13
emb|CAN63908.1| hypothetical protein VITISV_044218 [Vitis vinifera] 69 3e-13
emb|CAN65808.1| hypothetical protein VITISV_033389 [Vitis vinifera] 68 4e-13
emb|CAN65308.1| hypothetical protein VITISV_002323 [Vitis vinifera] 65 5e-13
gb|AAT40486.1| putative polyprotein [Solanum demissum] 79 1e-12
emb|CAN59949.1| hypothetical protein VITISV_043423 [Vitis vinifera] 68 1e-12
emb|CAN83015.1| hypothetical protein VITISV_041694 [Vitis vinifera] 78 2e-12
emb|CAN80919.1| hypothetical protein VITISV_002640 [Vitis vinifera] 78 2e-12
emb|CAN73272.1| hypothetical protein VITISV_013115 [Vitis vinifera] 77 2e-12
emb|CAN69804.1| hypothetical protein VITISV_017631 [Vitis vinifera] 77 2e-12
emb|CAN76645.1| hypothetical protein VITISV_004685 [Vitis vinifera] 76 7e-12
emb|CAN78026.1| hypothetical protein VITISV_032464 [Vitis vinifera] 75 9e-12
gb|AAD19784.1| putative retroelement pol polyprotein [Arabidopsi... 75 1e-11
emb|CAN83378.1| hypothetical protein VITISV_011333 [Vitis vinifera] 75 1e-11
emb|CAA18107.1| LTR retrotransposon like protein [Arabidopsis th... 74 2e-11
gb|AAG50751.1|AC079733_19 polyprotein, putative [Arabidopsis tha... 74 2e-11
dbj|BAB10743.1| retroelement pol polyprotein-like [Arabidopsis t... 73 4e-11
ref|XP_004149623.1| PREDICTED: uncharacterized protein LOC101211... 73 6e-11
>dbj|BAA97099.1| retroelement pol polyprotein-like [Arabidopsis thaliana]
Length = 1098
Score = 83.2 bits (204), Expect = 4e-14
Identities = 35/69 (50%), Positives = 47/69 (68%)
Frame = -1
Query: 547 GKTPPYSQIKVFGCLAFTHDHSLPKAKFRAHNHPCVFMGYPFGKKG*RLYDIENKRFFIS 368
G P YS ++ FGCL + H + K KF + CVF+GYP+GKKG RLYD+E +FF+S
Sbjct: 717 GSRPSYSALRTFGCLCYAHYRARDKDKFSERSRRCVFVGYPYGKKGWRLYDLEKNKFFVS 776
Query: 367 RDGFYEETV 341
RD ++ETV
Sbjct: 777 RDVVFQETV 785
>emb|CAN73437.1| hypothetical protein VITISV_031733 [Vitis vinifera]
Length = 1322
Score = 68.2 bits (165), Expect(2) = 5e-14
Identities = 31/69 (44%), Positives = 44/69 (63%)
Frame = -1
Query: 547 GKTPPYSQIKVFGCLAFTHDHSLPKAKFRAHNHPCVFMGYPFGKKG*RLYDIENKRFFIS 368
GK P YS I+VFGCLA+ + +P KF C+F+GYP G+K +LYD++ + F S
Sbjct: 636 GKLPSYSHIRVFGCLAYATNVHVPH-KFAPRAKRCIFLGYPVGQKAYKLYDLDTHQMFTS 694
Query: 367 RDGFYEETV 341
RD + ET+
Sbjct: 695 RDVVFHETI 703
Score = 35.0 bits (79), Expect(2) = 5e-14
Identities = 25/73 (34%), Positives = 36/73 (49%), Gaps = 3/73 (4%)
Frame = -2
Query: 228 PPGNMDRVEEPS---D*GLTPMHKKPFPQVGIKGLRRSSKERKIPTRLKDYVCNTIWHST 58
PP + +++PS P H P P+ LRRS + P L+DYVCN + +
Sbjct: 736 PPEPISPIQQPSLPNSVSTQPSHASPPPE---PILRRSQRPHHPPMALRDYVCNQV--TF 790
Query: 57 ISHLSSTPPISKS 19
+HL PP+S S
Sbjct: 791 PNHL---PPLSSS 800
>emb|CAN82105.1| hypothetical protein VITISV_002577 [Vitis vinifera]
Length = 1109
Score = 81.6 bits (200), Expect = 1e-13
Identities = 36/80 (45%), Positives = 49/80 (61%)
Frame = -1
Query: 547 GKTPPYSQIKVFGCLAFTHDHSLPKAKFRAHNHPCVFMGYPFGKKG*RLYDIENKRFFIS 368
G+ P Y I FGCL + HD + K KF + + C+F+GYPFGKKG RLYD+E+ +F+S
Sbjct: 537 GQAPSYKHIXTFGCLCYAHDQNRDKDKFASRSRKCIFVGYPFGKKGWRLYDLESGEYFVS 596
Query: 367 RDGFYEETVSFCSREFETYN 308
R+ V F EF +N
Sbjct: 597 RB------VIFVEAEFSYFN 610
>emb|CAN63908.1| hypothetical protein VITISV_044218 [Vitis vinifera]
Length = 1236
Score = 68.6 bits (166), Expect(2) = 3e-13
Identities = 31/69 (44%), Positives = 44/69 (63%)
Frame = -1
Query: 547 GKTPPYSQIKVFGCLAFTHDHSLPKAKFRAHNHPCVFMGYPFGKKG*RLYDIENKRFFIS 368
GK P YS I+VFGCLA+ + +P KF C+F+GYP G+K +LYD++ + F S
Sbjct: 711 GKLPSYSHIRVFGCLAYATNVHIPH-KFAPRAKRCIFLGYPVGQKAYKLYDLDTHQMFTS 769
Query: 367 RDGFYEETV 341
RD + ET+
Sbjct: 770 RDVVFHETI 778
Score = 32.0 bits (71), Expect(2) = 3e-13
Identities = 22/70 (31%), Positives = 32/70 (45%)
Frame = -2
Query: 228 PPGNMDRVEEPSD*GLTPMHKKPFPQVGIKGLRRSSKERKIPTRLKDYVCNTIWHSTISH 49
PP + +++PS P LRRS + P L+DYVCN + + +H
Sbjct: 811 PPEPISPIQQPSLPNSVSTQPSPTSPPPEPILRRSQRPHHPPMALRDYVCNQV--TFPNH 868
Query: 48 LSSTPPISKS 19
L PP+S S
Sbjct: 869 L---PPLSSS 875
>emb|CAN65808.1| hypothetical protein VITISV_033389 [Vitis vinifera]
Length = 1279
Score = 68.2 bits (165), Expect(2) = 4e-13
Identities = 31/69 (44%), Positives = 44/69 (63%)
Frame = -1
Query: 547 GKTPPYSQIKVFGCLAFTHDHSLPKAKFRAHNHPCVFMGYPFGKKG*RLYDIENKRFFIS 368
GK P YS I+VFGCLA+ + +P KF C+F+GYP G+K +LYD++ + F S
Sbjct: 613 GKLPSYSHIRVFGCLAYATNVHVPH-KFAPRAKRCIFLGYPVGQKAYKLYDLDTHQMFTS 671
Query: 367 RDGFYEETV 341
RD + ET+
Sbjct: 672 RDVVFHETI 680
Score = 32.0 bits (71), Expect(2) = 4e-13
Identities = 22/70 (31%), Positives = 32/70 (45%)
Frame = -2
Query: 228 PPGNMDRVEEPSD*GLTPMHKKPFPQVGIKGLRRSSKERKIPTRLKDYVCNTIWHSTISH 49
PP + +++PS P LRRS P L+DYVCN + ++ +H
Sbjct: 713 PPEPISPIQQPSLPNSVSTQPSPASPPPEPILRRSQXPHHPPMALRDYVCNQV--TSPNH 770
Query: 48 LSSTPPISKS 19
L PP+S S
Sbjct: 771 L---PPLSSS 777
>emb|CAN65308.1| hypothetical protein VITISV_002323 [Vitis vinifera]
Length = 1114
Score = 65.5 bits (158), Expect(2) = 5e-13
Identities = 30/69 (43%), Positives = 43/69 (62%)
Frame = -1
Query: 547 GKTPPYSQIKVFGCLAFTHDHSLPKAKFRAHNHPCVFMGYPFGKKG*RLYDIENKRFFIS 368
GK P YS I+VFGCLA+ + +P KF C+F+GYP +K +LYD++ + F S
Sbjct: 607 GKLPSYSHIRVFGCLAYATNVHVPH-KFAPRAKRCIFLGYPVXQKAYKLYDLDTHQMFTS 665
Query: 367 RDGFYEETV 341
RD + ET+
Sbjct: 666 RDVVFHETI 674
Score = 34.3 bits (77), Expect(2) = 5e-13
Identities = 25/75 (33%), Positives = 33/75 (44%)
Frame = -2
Query: 243 ECFDDPPGNMDRVEEPSD*GLTPMHKKPFPQVGIKGLRRSSKERKIPTRLKDYVCNTIWH 64
E P N D V S L+P +P P I +++ S P L DYVCN +
Sbjct: 678 ESIPSPSSNSDPVIPLSISDLSPPVXQPSPPEPISPIQQPSLPNSPPMALXDYVCNQVXX 737
Query: 63 STISHLSSTPPISKS 19
+HL PP+S S
Sbjct: 738 P--NHL---PPLSSS 747
>gb|AAT40486.1| putative polyprotein [Solanum demissum]
Length = 1065
Score = 78.6 bits (192), Expect = 1e-12
Identities = 33/69 (47%), Positives = 46/69 (66%)
Frame = -1
Query: 547 GKTPPYSQIKVFGCLAFTHDHSLPKAKFRAHNHPCVFMGYPFGKKG*RLYDIENKRFFIS 368
GK P Y +KVFGC+ F H S K KF + + C+F+GYPFGKKG R+YD+E ++S
Sbjct: 555 GKEPSYKPLKVFGCICFAHLKSRDKDKFGSKSRQCIFLGYPFGKKGWRVYDLETGDLYVS 614
Query: 367 RDGFYEETV 341
RD ++E +
Sbjct: 615 RDVTFDEKI 623
>emb|CAN59949.1| hypothetical protein VITISV_043423 [Vitis vinifera]
Length = 1059
Score = 68.2 bits (165), Expect(2) = 1e-12
Identities = 31/69 (44%), Positives = 44/69 (63%)
Frame = -1
Query: 547 GKTPPYSQIKVFGCLAFTHDHSLPKAKFRAHNHPCVFMGYPFGKKG*RLYDIENKRFFIS 368
GK P YS I+VFGCLA+ + +P KF C+F+GYP G+K +LYD++ + F S
Sbjct: 728 GKLPSYSHIRVFGCLAYATNVHVPH-KFAPRAKRCIFLGYPVGQKAYKLYDLDTHQMFTS 786
Query: 367 RDGFYEETV 341
RD + ET+
Sbjct: 787 RDVVFHETI 795
Score = 30.4 bits (67), Expect(2) = 1e-12
Identities = 20/66 (30%), Positives = 30/66 (45%), Gaps = 1/66 (1%)
Frame = -2
Query: 228 PPGNMDRVEEPSD*GLTPMHKKPFPQVGIKGLRRSSKERKIPTRLKDYVCNTIWH-STIS 52
PP + +++PS P LRRS + P L+DYVCN + + +
Sbjct: 828 PPEPISPIQQPSLPNSVSTQPSPASPPPEPILRRSQRPHHPPMALRDYVCNQVTSPNHLL 887
Query: 51 HLSSTP 34
LSS+P
Sbjct: 888 PLSSSP 893
>emb|CAN83015.1| hypothetical protein VITISV_041694 [Vitis vinifera]
Length = 1099
Score = 77.8 bits (190), Expect = 2e-12
Identities = 35/77 (45%), Positives = 48/77 (62%), Gaps = 1/77 (1%)
Frame = -1
Query: 562 F*VTNGKTPPYSQIKVFGCLAFTHDHSLPKAKFRAHNHPCVFMGYPFGKKG*RLYDIENK 383
F + G P Y+ I FGCL+F HD KF + + CVF+GYPFGKKG +L+D++ K
Sbjct: 388 FEILFGTPPSYAAIHTFGCLSFAHDQKSKGDKFASRSRKCVFLGYPFGKKGWKLFDLDTK 447
Query: 382 RFFISRD-GFYEETVSF 335
F+SRD F+E+ F
Sbjct: 448 ELFVSRDVKFFEDVFPF 464
>emb|CAN80919.1| hypothetical protein VITISV_002640 [Vitis vinifera]
Length = 1450
Score = 77.8 bits (190), Expect = 2e-12
Identities = 35/77 (45%), Positives = 48/77 (62%), Gaps = 1/77 (1%)
Frame = -1
Query: 562 F*VTNGKTPPYSQIKVFGCLAFTHDHSLPKAKFRAHNHPCVFMGYPFGKKG*RLYDIENK 383
F + G P Y+ I FGCL+F HD KF + + CVF+GYPFGKKG +L+D++ K
Sbjct: 721 FEILFGTPPSYAAIHTFGCLSFAHDQKSKGDKFASRSRKCVFLGYPFGKKGWKLFDLDTK 780
Query: 382 RFFISRD-GFYEETVSF 335
F+SRD F+E+ F
Sbjct: 781 ELFVSRDVKFFEDVFPF 797
>emb|CAN73272.1| hypothetical protein VITISV_013115 [Vitis vinifera]
Length = 1178
Score = 77.4 bits (189), Expect = 2e-12
Identities = 35/77 (45%), Positives = 48/77 (62%), Gaps = 1/77 (1%)
Frame = -1
Query: 562 F*VTNGKTPPYSQIKVFGCLAFTHDHSLPKAKFRAHNHPCVFMGYPFGKKG*RLYDIENK 383
F + G P Y+ I FGCL+F HD KF + + CVF+GYPFGKKG +L+D++ K
Sbjct: 474 FEILFGTPPSYAAIHTFGCLSFAHDXKSKGDKFASRSRKCVFLGYPFGKKGWKLFDLDTK 533
Query: 382 RFFISRD-GFYEETVSF 335
F+SRD F+E+ F
Sbjct: 534 ELFVSRDVKFFEDVFPF 550
>emb|CAN69804.1| hypothetical protein VITISV_017631 [Vitis vinifera]
Length = 1191
Score = 77.4 bits (189), Expect = 2e-12
Identities = 35/77 (45%), Positives = 48/77 (62%), Gaps = 1/77 (1%)
Frame = -1
Query: 562 F*VTNGKTPPYSQIKVFGCLAFTHDHSLPKAKFRAHNHPCVFMGYPFGKKG*RLYDIENK 383
F + G P Y+ I FGCL+F HD KF + + CVF+GYPFGKKG +L+D++ K
Sbjct: 433 FEILFGTPPSYAAIHTFGCLSFAHDKKSKGDKFASRSRKCVFLGYPFGKKGWKLFDLDTK 492
Query: 382 RFFISRD-GFYEETVSF 335
F+SRD F+E+ F
Sbjct: 493 ELFVSRDVKFFEDVFPF 509
>emb|CAN76645.1| hypothetical protein VITISV_004685 [Vitis vinifera]
Length = 1196
Score = 75.9 bits (185), Expect = 7e-12
Identities = 35/77 (45%), Positives = 47/77 (61%), Gaps = 1/77 (1%)
Frame = -1
Query: 562 F*VTNGKTPPYSQIKVFGCLAFTHDHSLPKAKFRAHNHPCVFMGYPFGKKG*RLYDIENK 383
F + G P Y+ I FGCL+F HD KF + + CVF+GYPFGKKG +L D++ K
Sbjct: 601 FEILFGTPPSYAAIHTFGCLSFAHDKKSKGDKFASRSRKCVFLGYPFGKKGWKLXDLDTK 660
Query: 382 RFFISRD-GFYEETVSF 335
F+SRD F+E+ F
Sbjct: 661 ELFVSRDVKFFEDVFPF 677
>emb|CAN78026.1| hypothetical protein VITISV_032464 [Vitis vinifera]
Length = 685
Score = 75.5 bits (184), Expect = 9e-12
Identities = 32/67 (47%), Positives = 43/67 (64%)
Frame = -1
Query: 562 F*VTNGKTPPYSQIKVFGCLAFTHDHSLPKAKFRAHNHPCVFMGYPFGKKG*RLYDIENK 383
F + G P Y+ I FGCL+F HD KF + + CVF+GYPFGKKG +L+D++ K
Sbjct: 615 FEILFGTPPSYAAIHTFGCLSFAHDQKSKGDKFASRSRKCVFLGYPFGKKGXKLFDLDTK 674
Query: 382 RFFISRD 362
F+SRD
Sbjct: 675 ELFVSRD 681
>gb|AAD19784.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1501
Score = 75.1 bits (183), Expect = 1e-11
Identities = 33/72 (45%), Positives = 45/72 (62%)
Frame = -1
Query: 556 VTNGKTPPYSQIKVFGCLAFTHDHSLPKAKFRAHNHPCVFMGYPFGKKG*RLYDIENKRF 377
V +G P YSQ++VFG + H + K KF + C+F+GYPFGKKG ++YDIE F
Sbjct: 738 VLHGSKPVYSQLRVFGSACYVHRVTRDKDKFGQRSRSCIFVGYPFGKKGWKVYDIERNEF 797
Query: 376 FISRDGFYEETV 341
+SRD + E V
Sbjct: 798 LVSRDVIFREEV 809
>emb|CAN83378.1| hypothetical protein VITISV_011333 [Vitis vinifera]
Length = 758
Score = 74.7 bits (182), Expect = 1e-11
Identities = 31/70 (44%), Positives = 45/70 (64%)
Frame = -1
Query: 547 GKTPPYSQIKVFGCLAFTHDHSLPKAKFRAHNHPCVFMGYPFGKKG*RLYDIENKRFFIS 368
G+ P Y I+ FGCL + HD + K KF + + C+F+ YPFGKKG +LYD+E+ + +S
Sbjct: 417 GQAPSYKHIRTFGCLCYAHDQNRDKDKFSSRSRKCIFVRYPFGKKGWQLYDLESSEYSVS 476
Query: 367 RDGFYEETVS 338
RD + VS
Sbjct: 477 RDETWGTDVS 486
>emb|CAA18107.1| LTR retrotransposon like protein [Arabidopsis thaliana]
gi|7269049|emb|CAB79159.1| LTR retrotransposon like
protein [Arabidopsis thaliana]
Length = 1109
Score = 74.3 bits (181), Expect = 2e-11
Identities = 31/65 (47%), Positives = 46/65 (70%)
Frame = -1
Query: 538 PPYSQIKVFGCLAFTHDHSLPKAKFRAHNHPCVFMGYPFGKKG*RLYDIENKRFFISRDG 359
P YS ++VFG L + H+ + KF A + CVF+GYP G+KG RL+D+E ++FF+SRD
Sbjct: 507 PKYSHLRVFGSLCYAHNQNHKGDKFAARSRRCVFVGYPHGQKGWRLFDLEEQKFFVSRDV 566
Query: 358 FYEET 344
++ET
Sbjct: 567 IFQET 571
>gb|AAG50751.1|AC079733_19 polyprotein, putative [Arabidopsis thaliana]
Length = 1468
Score = 74.3 bits (181), Expect = 2e-11
Identities = 31/65 (47%), Positives = 46/65 (70%)
Frame = -1
Query: 538 PPYSQIKVFGCLAFTHDHSLPKAKFRAHNHPCVFMGYPFGKKG*RLYDIENKRFFISRDG 359
P YS ++VFG L + H+ + KF A + CVF+GYP G+KG RL+D+E ++FF+SRD
Sbjct: 731 PKYSHLRVFGSLCYAHNQNHKGDKFAARSRRCVFVGYPHGQKGWRLFDLEEQKFFVSRDV 790
Query: 358 FYEET 344
++ET
Sbjct: 791 IFQET 795
>dbj|BAB10743.1| retroelement pol polyprotein-like [Arabidopsis thaliana]
Length = 1109
Score = 73.2 bits (178), Expect = 4e-11
Identities = 31/65 (47%), Positives = 46/65 (70%)
Frame = -1
Query: 538 PPYSQIKVFGCLAFTHDHSLPKAKFRAHNHPCVFMGYPFGKKG*RLYDIENKRFFISRDG 359
P YS ++VFG L + H+ + KF A + CVF+GYP G+KG RL+D+E ++FF+SRD
Sbjct: 507 PNYSHLRVFGSLCYAHNQNHKGDKFVARSRRCVFVGYPHGQKGWRLFDLEEQKFFVSRDV 566
Query: 358 FYEET 344
++ET
Sbjct: 567 IFQET 571
>ref|XP_004149623.1| PREDICTED: uncharacterized protein LOC101211618 [Cucumis sativus]
Length = 2085
Score = 72.8 bits (177), Expect = 6e-11
Identities = 38/73 (52%), Positives = 47/73 (64%), Gaps = 1/73 (1%)
Frame = -1
Query: 544 KTPPYSQIKVFGCLAFTHDHSLPKAKFRAHNHPCVFMGYPFGKKG*RLYDIENKRFFISR 365
K Y+ IK FGCLA+ S+ ++KF PCVFMG+P G KG RLYDI ++FFISR
Sbjct: 584 KKADYNIIKTFGCLAYASTPSVNRSKFDPRAQPCVFMGFPPGIKGYRLYDIAKRKFFISR 643
Query: 364 DG-FYEETVSFCS 329
D F+EE F S
Sbjct: 644 DVLFFEELFPFHS 656