BLASTX nr result
ID: Catharanthus22_contig00036837
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus22_contig00036837
(272 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN82105.1| hypothetical protein VITISV_002577 [Vitis vinifera] 69 4e-14
gb|AAD23883.1| putative retroelement pol polyprotein [Arabidopsi... 66 1e-12
gb|AAG50751.1|AC079733_19 polyprotein, putative [Arabidopsis tha... 62 6e-12
gb|AAG51258.1|AC025782_3 Ty1/copia-element polyprotein [Arabidop... 61 6e-12
emb|CAA18107.1| LTR retrotransposon like protein [Arabidopsis th... 62 6e-12
dbj|BAB10743.1| retroelement pol polyprotein-like [Arabidopsis t... 61 8e-12
gb|AAD24600.1| putative retroelement pol polyprotein [Arabidopsi... 60 1e-11
dbj|BAB10837.1| retroelement pol polyprotein-like [Arabidopsis t... 63 2e-10
dbj|BAA97287.1| retroelement pol polyprotein-like [Arabidopsis t... 56 8e-10
gb|AAC67205.1| putative retroelement pol polyprotein [Arabidopsi... 56 8e-10
gb|AAG09097.1|AC009323_8 Putative retroelement polyprotein [Arab... 60 2e-09
emb|CAN71595.1| hypothetical protein VITISV_010143 [Vitis vinifera] 61 3e-09
gb|AAD25646.1| putative retroelement pol polyprotein [Arabidopsi... 58 3e-09
emb|CAN76546.1| hypothetical protein VITISV_010420 [Vitis vinifera] 60 4e-09
gb|EOY05030.1| Cysteine-rich RLK (RECEPTOR-like protein kinase) ... 59 9e-09
gb|EOY09882.1| Uncharacterized protein TCM_025251 [Theobroma cacao] 63 9e-09
emb|CAN83015.1| hypothetical protein VITISV_041694 [Vitis vinifera] 65 9e-09
emb|CAN80919.1| hypothetical protein VITISV_002640 [Vitis vinifera] 65 9e-09
emb|CAN73272.1| hypothetical protein VITISV_013115 [Vitis vinifera] 65 1e-08
emb|CAN69804.1| hypothetical protein VITISV_017631 [Vitis vinifera] 65 1e-08
>emb|CAN82105.1| hypothetical protein VITISV_002577 [Vitis vinifera]
Length = 1109
Score = 68.6 bits (166), Expect(2) = 4e-14
Identities = 34/67 (50%), Positives = 41/67 (61%)
Frame = +3
Query: 33 G*SILTVGYLINHTPLSMSNRKTPFELLFNKVPSYSHIKTFGYLAYVHDHGVPKDKFRSR 212
G +L YLIN TP + KTP+E+L+ + PSY HI TFG L Y HD KDKF SR
Sbjct: 508 GECVLIARYLINXTPSVFLDGKTPYEILYGQAPSYKHIXTFGCLCYAHDQNRDKDKFASR 567
Query: 213 GTTMCIF 233
+ CIF
Sbjct: 568 -SRKCIF 573
Score = 34.7 bits (78), Expect(2) = 4e-14
Identities = 10/18 (55%), Positives = 16/18 (88%)
Frame = +1
Query: 217 RQCVFLGYSYGKKGWKFF 270
R+C+F+GY +GKKGW+ +
Sbjct: 569 RKCIFVGYPFGKKGWRLY 586
>gb|AAD23883.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1156
Score = 65.9 bits (159), Expect(2) = 1e-12
Identities = 30/67 (44%), Positives = 42/67 (62%)
Frame = +3
Query: 33 G*SILTVGYLINHTPLSMSNRKTPFELLFNKVPSYSHIKTFGYLAYVHDHGVPKDKFRSR 212
G ++LT YLIN TP S+ N +P+E+L N P+Y H++ FG YVH KDKF R
Sbjct: 273 GEAVLTAAYLINRTPTSLHNGLSPYEILHNSKPNYEHLRVFGSACYVHRASRDKDKFGER 332
Query: 213 GTTMCIF 233
+ +C+F
Sbjct: 333 -SRLCVF 338
Score = 32.3 bits (72), Expect(2) = 1e-12
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = +1
Query: 217 RQCVFLGYSYGKKGWKFF 270
R CVF+GY + +KGWK F
Sbjct: 334 RLCVFIGYPFAQKGWKVF 351
>gb|AAG50751.1|AC079733_19 polyprotein, putative [Arabidopsis thaliana]
Length = 1468
Score = 61.6 bits (148), Expect(2) = 6e-12
Identities = 28/67 (41%), Positives = 40/67 (59%)
Frame = +3
Query: 33 G*SILTVGYLINHTPLSMSNRKTPFELLFNKVPSYSHIKTFGYLAYVHDHGVPKDKFRSR 212
G IL+ YLIN TP + K+P+E+L+ P YSH++ FG L Y H+ DKF +R
Sbjct: 699 GECILSAAYLINRTPSMLLQGKSPYEMLYKTAPKYSHLRVFGSLCYAHNQNHKGDKFAAR 758
Query: 213 GTTMCIF 233
+ C+F
Sbjct: 759 -SRRCVF 764
Score = 34.3 bits (77), Expect(2) = 6e-12
Identities = 11/18 (61%), Positives = 16/18 (88%)
Frame = +1
Query: 217 RQCVFLGYSYGKKGWKFF 270
R+CVF+GY +G+KGW+ F
Sbjct: 760 RRCVFVGYPHGQKGWRLF 777
>gb|AAG51258.1|AC025782_3 Ty1/copia-element polyprotein [Arabidopsis thaliana]
Length = 1152
Score = 60.8 bits (146), Expect(2) = 6e-12
Identities = 28/65 (43%), Positives = 42/65 (64%)
Frame = +3
Query: 39 SILTVGYLINHTPLSMSNRKTPFELLFNKVPSYSHIKTFGYLAYVHDHGVPKDKFRSRGT 218
S+LT YLIN TP + + KTP+++L+++ PSY+ ++ FG L + H DKF+ RG
Sbjct: 701 SVLTAAYLINRTPTPILDGKTPYKILYSQPPSYASLRVFGSLCFARKHTGRLDKFQERG- 759
Query: 219 TMCIF 233
CIF
Sbjct: 760 RKCIF 764
Score = 35.0 bits (79), Expect(2) = 6e-12
Identities = 10/19 (52%), Positives = 17/19 (89%)
Frame = +1
Query: 214 GRQCVFLGYSYGKKGWKFF 270
GR+C+F+GY +G+KGW+ +
Sbjct: 759 GRKCIFVGYPHGQKGWRIY 777
>emb|CAA18107.1| LTR retrotransposon like protein [Arabidopsis thaliana]
gi|7269049|emb|CAB79159.1| LTR retrotransposon like
protein [Arabidopsis thaliana]
Length = 1109
Score = 61.6 bits (148), Expect(2) = 6e-12
Identities = 28/67 (41%), Positives = 40/67 (59%)
Frame = +3
Query: 33 G*SILTVGYLINHTPLSMSNRKTPFELLFNKVPSYSHIKTFGYLAYVHDHGVPKDKFRSR 212
G IL+ YLIN TP + K+P+E+L+ P YSH++ FG L Y H+ DKF +R
Sbjct: 475 GECILSAAYLINRTPSMLLQGKSPYEMLYKTAPKYSHLRVFGSLCYAHNQNHKGDKFAAR 534
Query: 213 GTTMCIF 233
+ C+F
Sbjct: 535 -SRRCVF 540
Score = 34.3 bits (77), Expect(2) = 6e-12
Identities = 11/18 (61%), Positives = 16/18 (88%)
Frame = +1
Query: 217 RQCVFLGYSYGKKGWKFF 270
R+CVF+GY +G+KGW+ F
Sbjct: 536 RRCVFVGYPHGQKGWRLF 553
>dbj|BAB10743.1| retroelement pol polyprotein-like [Arabidopsis thaliana]
Length = 1109
Score = 61.2 bits (147), Expect(2) = 8e-12
Identities = 28/67 (41%), Positives = 41/67 (61%)
Frame = +3
Query: 33 G*SILTVGYLINHTPLSMSNRKTPFELLFNKVPSYSHIKTFGYLAYVHDHGVPKDKFRSR 212
G IL+ YLIN TP + K+P+E+L+ P+YSH++ FG L Y H+ DKF +R
Sbjct: 475 GECILSAAYLINRTPSMLLQGKSPYEMLYKTAPNYSHLRVFGSLCYAHNQNHKGDKFVAR 534
Query: 213 GTTMCIF 233
+ C+F
Sbjct: 535 -SRRCVF 540
Score = 34.3 bits (77), Expect(2) = 8e-12
Identities = 11/18 (61%), Positives = 16/18 (88%)
Frame = +1
Query: 217 RQCVFLGYSYGKKGWKFF 270
R+CVF+GY +G+KGW+ F
Sbjct: 536 RRCVFVGYPHGQKGWRLF 553
>gb|AAD24600.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1333
Score = 60.5 bits (145), Expect(2) = 1e-11
Identities = 29/67 (43%), Positives = 38/67 (56%)
Frame = +3
Query: 33 G*SILTVGYLINHTPLSMSNRKTPFELLFNKVPSYSHIKTFGYLAYVHDHGVPKDKFRSR 212
G +LT YLIN TP S+ N TP+E L K P + H++ FG L Y H+ DKF R
Sbjct: 575 GECVLTAAYLINRTPSSVLNDSTPYERLHKKQPRFDHLRVFGSLCYAHNRNRGGDKFAER 634
Query: 213 GTTMCIF 233
+ C+F
Sbjct: 635 -SRRCVF 640
Score = 34.3 bits (77), Expect(2) = 1e-11
Identities = 11/18 (61%), Positives = 16/18 (88%)
Frame = +1
Query: 217 RQCVFLGYSYGKKGWKFF 270
R+CVF+GY +G+KGW+ F
Sbjct: 636 RRCVFVGYPHGQKGWRLF 653
>dbj|BAB10837.1| retroelement pol polyprotein-like [Arabidopsis thaliana]
Length = 1462
Score = 63.2 bits (152), Expect(2) = 2e-10
Identities = 29/56 (51%), Positives = 36/56 (64%)
Frame = +3
Query: 45 LTVGYLINHTPLSMSNRKTPFELLFNKVPSYSHIKTFGYLAYVHDHGVPKDKFRSR 212
LT YLIN TP + KTPFELL+N+ P +HI+ FG + YVH+ DKF SR
Sbjct: 657 LTAAYLINRTPTPLLQGKTPFELLYNRPPPVNHIRVFGCICYVHNQKHGGDKFESR 712
Score = 27.3 bits (59), Expect(2) = 2e-10
Identities = 8/15 (53%), Positives = 12/15 (80%)
Frame = +1
Query: 226 VFLGYSYGKKGWKFF 270
+FLGY + KKGW+ +
Sbjct: 717 IFLGYPFAKKGWRVY 731
>dbj|BAA97287.1| retroelement pol polyprotein-like [Arabidopsis thaliana]
Length = 1491
Score = 55.8 bits (133), Expect(2) = 8e-10
Identities = 28/67 (41%), Positives = 38/67 (56%)
Frame = +3
Query: 33 G*SILTVGYLINHTPLSMSNRKTPFELLFNKVPSYSHIKTFGYLAYVHDHGVPKDKFRSR 212
G +++T YLIN TP S+ N +P+ELL P Y ++ FG Y H KDKF R
Sbjct: 695 GEAVMTAAYLINRTPSSIHNGLSPYELLHGCKPDYDQLRVFGSACYAHRVTRDKDKFGER 754
Query: 213 GTTMCIF 233
+ +CIF
Sbjct: 755 -SRLCIF 760
Score = 32.7 bits (73), Expect(2) = 8e-10
Identities = 10/18 (55%), Positives = 15/18 (83%)
Frame = +1
Query: 217 RQCVFLGYSYGKKGWKFF 270
R C+F+GY +G+KGWK +
Sbjct: 756 RLCIFVGYPFGQKGWKVY 773
>gb|AAC67205.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1413
Score = 55.8 bits (133), Expect(2) = 8e-10
Identities = 28/67 (41%), Positives = 38/67 (56%)
Frame = +3
Query: 33 G*SILTVGYLINHTPLSMSNRKTPFELLFNKVPSYSHIKTFGYLAYVHDHGVPKDKFRSR 212
G +++T YLIN TP S+ N +P+ELL P Y ++ FG Y H KDKF R
Sbjct: 695 GEAVMTAAYLINRTPSSIHNGLSPYELLHGCKPDYDQLRVFGSACYAHRVTRDKDKFGER 754
Query: 213 GTTMCIF 233
+ +CIF
Sbjct: 755 -SRLCIF 760
Score = 32.7 bits (73), Expect(2) = 8e-10
Identities = 10/18 (55%), Positives = 15/18 (83%)
Frame = +1
Query: 217 RQCVFLGYSYGKKGWKFF 270
R C+F+GY +G+KGWK +
Sbjct: 756 RLCIFVGYPFGQKGWKVY 773
>gb|AAG09097.1|AC009323_8 Putative retroelement polyprotein [Arabidopsis thaliana]
Length = 1486
Score = 60.1 bits (144), Expect(2) = 2e-09
Identities = 28/56 (50%), Positives = 35/56 (62%)
Frame = +3
Query: 45 LTVGYLINHTPLSMSNRKTPFELLFNKVPSYSHIKTFGYLAYVHDHGVPKDKFRSR 212
LT YLIN TP + KTPFEL++N+ P HI+ FG + YVH+ DKF SR
Sbjct: 693 LTAAYLINRTPTPLLKGKTPFELIYNRPPPLQHIRIFGCICYVHNLKHGGDKFASR 748
Score = 27.3 bits (59), Expect(2) = 2e-09
Identities = 8/15 (53%), Positives = 12/15 (80%)
Frame = +1
Query: 226 VFLGYSYGKKGWKFF 270
+FLGY + KKGW+ +
Sbjct: 753 IFLGYPFAKKGWRVY 767
>emb|CAN71595.1| hypothetical protein VITISV_010143 [Vitis vinifera]
Length = 1523
Score = 60.8 bits (146), Expect(2) = 3e-09
Identities = 29/60 (48%), Positives = 37/60 (61%)
Frame = +3
Query: 33 G*SILTVGYLINHTPLSMSNRKTPFELLFNKVPSYSHIKTFGYLAYVHDHGVPKDKFRSR 212
G +ILT YLIN TP + KTPFE LF+K P+YSH++ FG +V H + KF R
Sbjct: 712 GDAILTAAYLINRTPTPLLQGKTPFEKLFHKSPNYSHLRVFGCRCFVSTHPLRPSKFDPR 771
Score = 25.8 bits (55), Expect(2) = 3e-09
Identities = 9/25 (36%), Positives = 16/25 (64%)
Frame = +1
Query: 196 TSLDLEGRQCVFLGYSYGKKGWKFF 270
+ D + VF+GY +G+KG+K +
Sbjct: 766 SKFDPRSIESVFIGYPHGQKGYKVY 790
>gb|AAD25646.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1461
Score = 57.8 bits (138), Expect(2) = 3e-09
Identities = 29/67 (43%), Positives = 40/67 (59%)
Frame = +3
Query: 33 G*SILTVGYLINHTPLSMSNRKTPFELLFNKVPSYSHIKTFGYLAYVHDHGVPKDKFRSR 212
G +LT +LIN TP ++ + KTPFE+L K+P YS +KTFG L Y + KF R
Sbjct: 752 GDCVLTAVFLINRTPSALLSNKTPFEVLTGKLPDYSQLKTFGCLCYSSTSSKQRHKFLPR 811
Query: 213 GTTMCIF 233
+ C+F
Sbjct: 812 -SRACVF 817
Score = 28.9 bits (63), Expect(2) = 3e-09
Identities = 11/16 (68%), Positives = 13/16 (81%)
Frame = +1
Query: 217 RQCVFLGYSYGKKGWK 264
R CVFLGY +G KG+K
Sbjct: 813 RACVFLGYPFGFKGYK 828
>emb|CAN76546.1| hypothetical protein VITISV_010420 [Vitis vinifera]
Length = 1288
Score = 60.5 bits (145), Expect(2) = 4e-09
Identities = 29/57 (50%), Positives = 35/57 (61%)
Frame = +3
Query: 42 ILTVGYLINHTPLSMSNRKTPFELLFNKVPSYSHIKTFGYLAYVHDHGVPKDKFRSR 212
ILT YLIN TP N KTPFE+L +K+P YSH++ FG L YV + KF R
Sbjct: 600 ILTAVYLINRTPSPFLNNKTPFEILHDKLPDYSHLRVFGCLCYVSTLKANRTKFSPR 656
Score = 25.8 bits (55), Expect(2) = 4e-09
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = +1
Query: 193 KTSLDLEGRQCVFLGYSYGKKGWK 264
+T + VFLGY +G KG+K
Sbjct: 650 RTKFSPRAKAAVFLGYPFGFKGYK 673
>gb|EOY05030.1| Cysteine-rich RLK (RECEPTOR-like protein kinase) 8 [Theobroma
cacao]
Length = 1141
Score = 59.3 bits (142), Expect(2) = 9e-09
Identities = 27/57 (47%), Positives = 36/57 (63%)
Frame = +3
Query: 33 G*SILTVGYLINHTPLSMSNRKTPFELLFNKVPSYSHIKTFGYLAYVHDHGVPKDKF 203
G +LT YLIN PLS+ KTP+E+LF + P+Y H++TFG L Y +DKF
Sbjct: 483 GECVLTAAYLINRMPLSVLKNKTPYEILFGRSPTYQHLRTFGCLCYGLITNKSRDKF 539
Score = 25.8 bits (55), Expect(2) = 9e-09
Identities = 8/15 (53%), Positives = 13/15 (86%)
Frame = +1
Query: 226 VFLGYSYGKKGWKFF 270
+FLGY +G+KG++ F
Sbjct: 547 IFLGYPHGQKGYRIF 561
>gb|EOY09882.1| Uncharacterized protein TCM_025251 [Theobroma cacao]
Length = 482
Score = 62.8 bits (151), Expect(2) = 9e-09
Identities = 29/63 (46%), Positives = 39/63 (61%)
Frame = +3
Query: 15 LFNSILG*SILTVGYLINHTPLSMSNRKTPFELLFNKVPSYSHIKTFGYLAYVHDHGVPK 194
L S G +LT YLINH PL + KTP+E+L K P+Y ++++FG L Y H P+
Sbjct: 218 LLISFWGECVLTAAYLINHMPLIILQNKTPYEVLLRKSPTYDYLRSFGCLCYGHIINKPR 277
Query: 195 DKF 203
DKF
Sbjct: 278 DKF 280
Score = 22.3 bits (46), Expect(2) = 9e-09
Identities = 7/15 (46%), Positives = 12/15 (80%)
Frame = +1
Query: 226 VFLGYSYGKKGWKFF 270
VF+GY G+KG++ +
Sbjct: 288 VFVGYPSGQKGYRIY 302
>emb|CAN83015.1| hypothetical protein VITISV_041694 [Vitis vinifera]
Length = 1099
Score = 65.1 bits (157), Expect = 9e-09
Identities = 33/75 (44%), Positives = 46/75 (61%)
Frame = +3
Query: 33 G*SILTVGYLINHTPLSMSNRKTPFELLFNKVPSYSHIKTFGYLAYVHDHGVPKDKFRSR 212
G S+L +LIN TP + + KTPFE+LF PSY+ I TFG L++ HD DKF SR
Sbjct: 364 GESVLAAAHLINRTPSPLLHNKTPFEILFGTPPSYAAIHTFGCLSFAHDQKSKGDKFASR 423
Query: 213 GTTMCIFRIFVWKKR 257
+ C+F + + K+
Sbjct: 424 -SRKCVFLGYPFGKK 437
>emb|CAN80919.1| hypothetical protein VITISV_002640 [Vitis vinifera]
Length = 1450
Score = 65.1 bits (157), Expect = 9e-09
Identities = 33/75 (44%), Positives = 46/75 (61%)
Frame = +3
Query: 33 G*SILTVGYLINHTPLSMSNRKTPFELLFNKVPSYSHIKTFGYLAYVHDHGVPKDKFRSR 212
G S+L +LIN TP + + KTPFE+LF PSY+ I TFG L++ HD DKF SR
Sbjct: 697 GESVLAAAHLINRTPSPLLHNKTPFEILFGTPPSYAAIHTFGCLSFAHDQKSKGDKFASR 756
Query: 213 GTTMCIFRIFVWKKR 257
+ C+F + + K+
Sbjct: 757 -SRKCVFLGYPFGKK 770
>emb|CAN73272.1| hypothetical protein VITISV_013115 [Vitis vinifera]
Length = 1178
Score = 64.7 bits (156), Expect = 1e-08
Identities = 33/75 (44%), Positives = 46/75 (61%)
Frame = +3
Query: 33 G*SILTVGYLINHTPLSMSNRKTPFELLFNKVPSYSHIKTFGYLAYVHDHGVPKDKFRSR 212
G S+L +LIN TP + + KTPFE+LF PSY+ I TFG L++ HD DKF SR
Sbjct: 450 GESVLAAAHLINRTPSPLLHNKTPFEILFGTPPSYAAIHTFGCLSFAHDXKSKGDKFASR 509
Query: 213 GTTMCIFRIFVWKKR 257
+ C+F + + K+
Sbjct: 510 -SRKCVFLGYPFGKK 523
>emb|CAN69804.1| hypothetical protein VITISV_017631 [Vitis vinifera]
Length = 1191
Score = 64.7 bits (156), Expect = 1e-08
Identities = 33/75 (44%), Positives = 46/75 (61%)
Frame = +3
Query: 33 G*SILTVGYLINHTPLSMSNRKTPFELLFNKVPSYSHIKTFGYLAYVHDHGVPKDKFRSR 212
G S+L +LIN TP + + KTPFE+LF PSY+ I TFG L++ HD DKF SR
Sbjct: 409 GESVLAAAHLINRTPSPLLHNKTPFEILFGTPPSYAAIHTFGCLSFAHDKKSKGDKFASR 468
Query: 213 GTTMCIFRIFVWKKR 257
+ C+F + + K+
Sbjct: 469 -SRKCVFLGYPFGKK 482