BLASTX nr result
ID: Catharanthus22_contig00036172
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus22_contig00036172
(253 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006601251.1| PREDICTED: RNA pseudouridine synthase 3, mit... 62 6e-08
ref|XP_006601250.1| PREDICTED: RNA pseudouridine synthase 3, mit... 62 6e-08
ref|XP_006353749.1| PREDICTED: RNA pseudouridine synthase 3, mit... 61 1e-07
ref|XP_004243668.1| PREDICTED: RNA pseudourine synthase 3, mitoc... 61 1e-07
ref|XP_002526838.1| ribosomal pseudouridine synthase, putative [... 61 1e-07
ref|XP_006385075.1| hypothetical protein POPTR_0004s23670g [Popu... 61 2e-07
ref|XP_006843179.1| hypothetical protein AMTR_s00146p00072100 [A... 61 2e-07
ref|XP_004515177.1| PREDICTED: RNA pseudourine synthase 3, mitoc... 60 2e-07
ref|XP_004515176.1| PREDICTED: RNA pseudourine synthase 3, mitoc... 60 2e-07
gb|ESW32964.1| hypothetical protein PHAVU_001G032500g [Phaseolus... 60 3e-07
gb|EOY26277.1| Pseudouridine synthase family protein [Theobroma ... 59 7e-07
ref|XP_002267010.1| PREDICTED: RNA pseudourine synthase 3, mitoc... 59 7e-07
ref|XP_006389943.1| hypothetical protein EUTSA_v10018480mg [Eutr... 57 2e-06
ref|XP_004158518.1| PREDICTED: RNA pseudourine synthase 3, mitoc... 57 3e-06
ref|XP_004138653.1| PREDICTED: RNA pseudourine synthase 3, mitoc... 57 3e-06
ref|XP_004300876.1| PREDICTED: RNA pseudourine synthase 3, mitoc... 56 4e-06
gb|EMJ11188.1| hypothetical protein PRUPE_ppa005240mg [Prunus pe... 56 4e-06
emb|CBI18448.3| unnamed protein product [Vitis vinifera] 55 7e-06
ref|XP_006300371.1| hypothetical protein CARUB_v10022381mg [Caps... 55 1e-05
gb|AAC83020.1| Contains similarity to gi|1786244 hypothetical 24... 55 1e-05
>ref|XP_006601251.1| PREDICTED: RNA pseudouridine synthase 3, mitochondrial-like isoform
X2 [Glycine max]
Length = 449
Score = 62.4 bits (150), Expect = 6e-08
Identities = 29/38 (76%), Positives = 33/38 (86%)
Frame = -2
Query: 252 ETKISKRFDIIPSGTLYPNADEIEYLRRLVIYKAQPFI 139
ET+ISKR+D IPSGTLYPNADEI+YL+RLVIYK I
Sbjct: 151 ETRISKRYDAIPSGTLYPNADEIKYLQRLVIYKDSAII 188
>ref|XP_006601250.1| PREDICTED: RNA pseudouridine synthase 3, mitochondrial-like isoform
X1 [Glycine max]
Length = 476
Score = 62.4 bits (150), Expect = 6e-08
Identities = 29/38 (76%), Positives = 33/38 (86%)
Frame = -2
Query: 252 ETKISKRFDIIPSGTLYPNADEIEYLRRLVIYKAQPFI 139
ET+ISKR+D IPSGTLYPNADEI+YL+RLVIYK I
Sbjct: 151 ETRISKRYDAIPSGTLYPNADEIKYLQRLVIYKDSAII 188
>ref|XP_006353749.1| PREDICTED: RNA pseudouridine synthase 3, mitochondrial-like isoform
X1 [Solanum tuberosum] gi|565374397|ref|XP_006353750.1|
PREDICTED: RNA pseudouridine synthase 3,
mitochondrial-like isoform X2 [Solanum tuberosum]
gi|565374399|ref|XP_006353751.1| PREDICTED: RNA
pseudouridine synthase 3, mitochondrial-like isoform X3
[Solanum tuberosum]
Length = 475
Score = 61.2 bits (147), Expect = 1e-07
Identities = 27/33 (81%), Positives = 31/33 (93%)
Frame = -2
Query: 252 ETKISKRFDIIPSGTLYPNADEIEYLRRLVIYK 154
ET+ISKR+D+IPSGTLYPNADEI YL+RLV YK
Sbjct: 151 ETRISKRYDVIPSGTLYPNADEIAYLQRLVFYK 183
>ref|XP_004243668.1| PREDICTED: RNA pseudourine synthase 3, mitochondrial-like [Solanum
lycopersicum]
Length = 475
Score = 61.2 bits (147), Expect = 1e-07
Identities = 27/33 (81%), Positives = 31/33 (93%)
Frame = -2
Query: 252 ETKISKRFDIIPSGTLYPNADEIEYLRRLVIYK 154
ET+ISKR+D+IPSGTLYPNADEI YL+RLV YK
Sbjct: 151 ETRISKRYDVIPSGTLYPNADEIAYLQRLVFYK 183
>ref|XP_002526838.1| ribosomal pseudouridine synthase, putative [Ricinus communis]
gi|223533842|gb|EEF35573.1| ribosomal pseudouridine
synthase, putative [Ricinus communis]
Length = 468
Score = 61.2 bits (147), Expect = 1e-07
Identities = 29/38 (76%), Positives = 32/38 (84%)
Frame = -2
Query: 252 ETKISKRFDIIPSGTLYPNADEIEYLRRLVIYKAQPFI 139
ET+ISKRFD IPSGTLYPNADEI+YL+RLV YK I
Sbjct: 143 ETRISKRFDTIPSGTLYPNADEIQYLQRLVKYKDSAII 180
>ref|XP_006385075.1| hypothetical protein POPTR_0004s23670g [Populus trichocarpa]
gi|550341843|gb|ERP62872.1| hypothetical protein
POPTR_0004s23670g [Populus trichocarpa]
Length = 462
Score = 60.8 bits (146), Expect = 2e-07
Identities = 29/33 (87%), Positives = 30/33 (90%)
Frame = -2
Query: 252 ETKISKRFDIIPSGTLYPNADEIEYLRRLVIYK 154
ET ISKRFD IPSGTLYPNADEIEYL+RLV YK
Sbjct: 137 ETAISKRFDTIPSGTLYPNADEIEYLQRLVKYK 169
>ref|XP_006843179.1| hypothetical protein AMTR_s00146p00072100 [Amborella trichopoda]
gi|548845403|gb|ERN04854.1| hypothetical protein
AMTR_s00146p00072100 [Amborella trichopoda]
Length = 462
Score = 60.8 bits (146), Expect = 2e-07
Identities = 28/38 (73%), Positives = 33/38 (86%)
Frame = -2
Query: 252 ETKISKRFDIIPSGTLYPNADEIEYLRRLVIYKAQPFI 139
E+KISKR+D IPSGTL+PNADEI+YLRRLV+YK I
Sbjct: 140 ESKISKRYDTIPSGTLHPNADEIDYLRRLVMYKDSAII 177
>ref|XP_004515177.1| PREDICTED: RNA pseudourine synthase 3, mitochondrial-like isoform
X2 [Cicer arietinum]
Length = 360
Score = 60.5 bits (145), Expect = 2e-07
Identities = 30/38 (78%), Positives = 32/38 (84%)
Frame = -2
Query: 252 ETKISKRFDIIPSGTLYPNADEIEYLRRLVIYKAQPFI 139
ETKISKRFD IPSGTL PNADEI+YL+RLVIYK I
Sbjct: 154 ETKISKRFDPIPSGTLCPNADEIKYLQRLVIYKDSAII 191
>ref|XP_004515176.1| PREDICTED: RNA pseudourine synthase 3, mitochondrial-like isoform
X1 [Cicer arietinum]
Length = 479
Score = 60.5 bits (145), Expect = 2e-07
Identities = 30/38 (78%), Positives = 32/38 (84%)
Frame = -2
Query: 252 ETKISKRFDIIPSGTLYPNADEIEYLRRLVIYKAQPFI 139
ETKISKRFD IPSGTL PNADEI+YL+RLVIYK I
Sbjct: 154 ETKISKRFDPIPSGTLCPNADEIKYLQRLVIYKDSAII 191
>gb|ESW32964.1| hypothetical protein PHAVU_001G032500g [Phaseolus vulgaris]
Length = 480
Score = 60.1 bits (144), Expect = 3e-07
Identities = 27/38 (71%), Positives = 32/38 (84%)
Frame = -2
Query: 252 ETKISKRFDIIPSGTLYPNADEIEYLRRLVIYKAQPFI 139
ET++SKR+D IP GTLYPNADEI+YL+RLVIYK I
Sbjct: 155 ETRVSKRYDAIPCGTLYPNADEIKYLQRLVIYKDSAII 192
>gb|EOY26277.1| Pseudouridine synthase family protein [Theobroma cacao]
Length = 471
Score = 58.9 bits (141), Expect = 7e-07
Identities = 27/33 (81%), Positives = 30/33 (90%)
Frame = -2
Query: 252 ETKISKRFDIIPSGTLYPNADEIEYLRRLVIYK 154
ET+ISKRFD IPSGTLYPN DEI+YL+RLV YK
Sbjct: 146 ETRISKRFDCIPSGTLYPNKDEIDYLQRLVKYK 178
>ref|XP_002267010.1| PREDICTED: RNA pseudourine synthase 3, mitochondrial-like [Vitis
vinifera]
Length = 479
Score = 58.9 bits (141), Expect = 7e-07
Identities = 27/33 (81%), Positives = 30/33 (90%)
Frame = -2
Query: 252 ETKISKRFDIIPSGTLYPNADEIEYLRRLVIYK 154
E +ISKRFD IPSGTL+PNADEIEYL+RLV YK
Sbjct: 152 EARISKRFDTIPSGTLHPNADEIEYLQRLVTYK 184
>ref|XP_006389943.1| hypothetical protein EUTSA_v10018480mg [Eutrema salsugineum]
gi|557086377|gb|ESQ27229.1| hypothetical protein
EUTSA_v10018480mg [Eutrema salsugineum]
Length = 478
Score = 57.4 bits (137), Expect = 2e-06
Identities = 27/38 (71%), Positives = 31/38 (81%)
Frame = -2
Query: 252 ETKISKRFDIIPSGTLYPNADEIEYLRRLVIYKAQPFI 139
ET+ISKR+D IPSGTLYPNADEI YL+RLV +K I
Sbjct: 152 ETRISKRYDTIPSGTLYPNADEIAYLQRLVRFKDSAII 189
>ref|XP_004158518.1| PREDICTED: RNA pseudourine synthase 3, mitochondrial-like [Cucumis
sativus]
Length = 471
Score = 57.0 bits (136), Expect = 3e-06
Identities = 26/38 (68%), Positives = 31/38 (81%)
Frame = -2
Query: 252 ETKISKRFDIIPSGTLYPNADEIEYLRRLVIYKAQPFI 139
E K+++RFD IPSGTLYPNADEI+YL+RLV YK I
Sbjct: 147 EMKVARRFDTIPSGTLYPNADEIKYLQRLVKYKDSAII 184
>ref|XP_004138653.1| PREDICTED: RNA pseudourine synthase 3, mitochondrial-like [Cucumis
sativus]
Length = 471
Score = 57.0 bits (136), Expect = 3e-06
Identities = 26/38 (68%), Positives = 31/38 (81%)
Frame = -2
Query: 252 ETKISKRFDIIPSGTLYPNADEIEYLRRLVIYKAQPFI 139
E K+++RFD IPSGTLYPNADEI+YL+RLV YK I
Sbjct: 147 EMKVARRFDTIPSGTLYPNADEIKYLQRLVKYKDSAII 184
>ref|XP_004300876.1| PREDICTED: RNA pseudourine synthase 3, mitochondrial-like [Fragaria
vesca subsp. vesca]
Length = 469
Score = 56.2 bits (134), Expect = 4e-06
Identities = 26/38 (68%), Positives = 31/38 (81%)
Frame = -2
Query: 252 ETKISKRFDIIPSGTLYPNADEIEYLRRLVIYKAQPFI 139
E+K+S+RFD IPS TLYPNADEI+YL+RLV YK I
Sbjct: 144 ESKVSRRFDCIPSETLYPNADEIDYLQRLVKYKDSAII 181
>gb|EMJ11188.1| hypothetical protein PRUPE_ppa005240mg [Prunus persica]
Length = 471
Score = 56.2 bits (134), Expect = 4e-06
Identities = 25/38 (65%), Positives = 31/38 (81%)
Frame = -2
Query: 252 ETKISKRFDIIPSGTLYPNADEIEYLRRLVIYKAQPFI 139
E+++S+RFD IPSGTLYPNADEIEY++R V YK I
Sbjct: 146 ESRVSRRFDCIPSGTLYPNADEIEYMQRRVKYKDSAII 183
>emb|CBI18448.3| unnamed protein product [Vitis vinifera]
Length = 481
Score = 55.5 bits (132), Expect = 7e-06
Identities = 26/35 (74%), Positives = 30/35 (85%)
Frame = -2
Query: 252 ETKISKRFDIIPSGTLYPNADEIEYLRRLVIYKAQ 148
E +ISKRFD IPSGTL+PNADEIEYL+RL + K Q
Sbjct: 152 EARISKRFDTIPSGTLHPNADEIEYLQRLWLLKFQ 186
>ref|XP_006300371.1| hypothetical protein CARUB_v10022381mg [Capsella rubella]
gi|482569081|gb|EOA33269.1| hypothetical protein
CARUB_v10022381mg [Capsella rubella]
Length = 478
Score = 55.1 bits (131), Expect = 1e-05
Identities = 26/38 (68%), Positives = 30/38 (78%)
Frame = -2
Query: 252 ETKISKRFDIIPSGTLYPNADEIEYLRRLVIYKAQPFI 139
E +ISKR+D IPSGTLYPNADEI YL+RLV +K I
Sbjct: 152 EMRISKRYDTIPSGTLYPNADEIAYLQRLVRFKDSAII 189
>gb|AAC83020.1| Contains similarity to gi|1786244 hypothetical 24.9 kD protein in
surA-hepA intergenic region yab0 from Escherichia coli
genome gb|AE000116, and to hypothetical YABO family
PF|00849 [Arabidopsis thaliana]
Length = 491
Score = 55.1 bits (131), Expect = 1e-05
Identities = 26/38 (68%), Positives = 30/38 (78%)
Frame = -2
Query: 252 ETKISKRFDIIPSGTLYPNADEIEYLRRLVIYKAQPFI 139
E +ISKR+D IPSGTLYPNADEI YL+RLV +K I
Sbjct: 152 EMRISKRYDTIPSGTLYPNADEIAYLQRLVRFKDSAII 189