BLASTX nr result

ID: Catharanthus22_contig00036108 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus22_contig00036108
         (219 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_588284.1| hypothetical protein ZeamMp020 [Zea mays subsp....    62   8e-08
gb|AFW86835.1| hypothetical protein ZEAMMB73_214691 [Zea mays]         56   6e-06

>ref|YP_588284.1| hypothetical protein ZeamMp020 [Zea mays subsp. mays]
           gi|94502700|ref|YP_588308.1| hypothetical protein
           ZeamMp046 [Zea mays subsp. mays]
           gi|40795138|gb|AAR91182.1| hypothetical protein
           (mitochondrion) [Zea mays] gi|40795139|gb|AAR91183.1|
           hypothetical protein (mitochondrion) [Zea mays]
          Length = 99

 Score = 62.0 bits (149), Expect = 8e-08
 Identities = 31/46 (67%), Positives = 35/46 (76%)
 Frame = -1

Query: 168 PNPFLRRAVYCK*SEPAWSKPPIEASEVGEPYDGQLSPAVRRGLSC 31
           PNPF+   +    + P  S PP+EASEVGEPYDGQLSPAVRRGLSC
Sbjct: 55  PNPFVGPCIVSDPNLPGAS-PPLEASEVGEPYDGQLSPAVRRGLSC 99


>gb|AFW86835.1| hypothetical protein ZEAMMB73_214691 [Zea mays]
          Length = 77

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 29/44 (65%), Positives = 33/44 (75%)
 Frame = -1

Query: 165 NPFLRRAVYCK*SEPAWSKPPIEASEVGEPYDGQLSPAVRRGLS 34
           NPF+   +    + P  S PP+EASEVGEPYDGQLSPAVRRGLS
Sbjct: 34  NPFVGPCIVSDPNLPGAS-PPLEASEVGEPYDGQLSPAVRRGLS 76


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