BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus22_contig00035829
         (413 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABD28627.2| RNA-directed DNA polymerase (Reverse transcriptas...    39   4e-06

>gb|ABD28627.2| RNA-directed DNA polymerase (Reverse transcriptase); Ribonuclease H
           [Medicago truncatula]
          Length = 1296

 Score = 38.5 bits (88), Expect(2) = 4e-06
 Identities = 22/54 (40%), Positives = 28/54 (51%)
 Frame = +3

Query: 27  KTMFLSPTCRLTFIKSS*ASIPIHLVQCLKLPPKFTDKIDQTTKMFLWGYSVGK 188
           K   L+ T RLT   S  ++IP + +Q   LP    D IDQT + FLW  S  K
Sbjct: 782 KNRLLNRTGRLTLATSVLSTIPTYYMQINWLPQNICDSIDQTARNFLWKGSNNK 835



 Score = 37.4 bits (85), Expect(2) = 4e-06
 Identities = 19/47 (40%), Positives = 28/47 (59%)
 Frame = +2

Query: 179 SGKNMHLVNSDTGIAPKNKGGL*VKAAKD*NNSLHSGLAWIFLQETD 319
           + K +HLVN  T   PK+ GGL +++A+D N  L   L W  +Q T+
Sbjct: 833 NNKGIHLVNWKTITRPKSIGGLGIRSARDANICLLGKLVWDMVQSTN 879