BLASTX nr result
ID: Catharanthus22_contig00035739
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus22_contig00035739
(297 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002272196.1| PREDICTED: protein SHORT-ROOT [Vitis vinifer... 55 3e-15
emb|CAN61051.1| hypothetical protein VITISV_023622 [Vitis vinifera] 55 3e-15
ref|XP_006372828.1| hypothetical protein POPTR_0017s05450g [Popu... 53 3e-14
ref|XP_006442965.1| hypothetical protein CICLE_v10020072mg [Citr... 53 7e-14
ref|XP_002327997.1| GRAS family transcription factor [Populus tr... 53 6e-12
gb|EMJ22811.1| hypothetical protein PRUPE_ppa1027119mg [Prunus p... 50 1e-10
gb|EOY04802.1| GRAS family transcription factor [Theobroma cacao] 54 2e-10
ref|XP_002309782.1| hypothetical protein POPTR_0007s01650g [Popu... 50 3e-10
ref|XP_004165311.1| PREDICTED: LOW QUALITY PROTEIN: protein SHOR... 55 7e-06
ref|XP_004145036.1| PREDICTED: protein SHORT-ROOT-like [Cucumis ... 55 7e-06
>ref|XP_002272196.1| PREDICTED: protein SHORT-ROOT [Vitis vinifera]
gi|296081342|emb|CBI17688.3| unnamed protein product
[Vitis vinifera]
Length = 436
Score = 55.5 bits (132), Expect(2) = 3e-15
Identities = 29/52 (55%), Positives = 36/52 (69%)
Frame = +1
Query: 7 MDISFFNVKETTFFLHMISSSLSNGPQIHMQSTNNRPQNSHTSTNKSTDSGE 162
MD + F K T FF H + SNG Q MQS+NN+PQ SHTST++S+DSGE
Sbjct: 1 MDRTLFTPKGTYFFHH--PTQQSNGTQPDMQSSNNQPQTSHTSTSRSSDSGE 50
Score = 51.6 bits (122), Expect(2) = 3e-15
Identities = 23/31 (74%), Positives = 27/31 (87%)
Frame = +3
Query: 204 SELLRECAIAISEKDSNKIHHSFWMLNELAS 296
S LL+ECA AIS+KDS++IHH WMLNELAS
Sbjct: 59 SSLLKECARAISDKDSSRIHHLLWMLNELAS 89
>emb|CAN61051.1| hypothetical protein VITISV_023622 [Vitis vinifera]
Length = 436
Score = 55.5 bits (132), Expect(2) = 3e-15
Identities = 29/52 (55%), Positives = 36/52 (69%)
Frame = +1
Query: 7 MDISFFNVKETTFFLHMISSSLSNGPQIHMQSTNNRPQNSHTSTNKSTDSGE 162
MD + F K T FF H + SNG Q MQS+NN+PQ SHTST++S+DSGE
Sbjct: 1 MDRTLFTPKGTYFFHH--PTQQSNGTQPDMQSSNNQPQTSHTSTSRSSDSGE 50
Score = 51.6 bits (122), Expect(2) = 3e-15
Identities = 23/31 (74%), Positives = 27/31 (87%)
Frame = +3
Query: 204 SELLRECAIAISEKDSNKIHHSFWMLNELAS 296
S LL+ECA AIS+KDS++IHH WMLNELAS
Sbjct: 59 SSLLKECARAISDKDSSRIHHLLWMLNELAS 89
>ref|XP_006372828.1| hypothetical protein POPTR_0017s05450g [Populus trichocarpa]
gi|550319476|gb|ERP50625.1| hypothetical protein
POPTR_0017s05450g [Populus trichocarpa]
Length = 441
Score = 53.1 bits (126), Expect(2) = 3e-14
Identities = 25/31 (80%), Positives = 27/31 (87%)
Frame = +3
Query: 204 SELLRECAIAISEKDSNKIHHSFWMLNELAS 296
S+LL ECA AISEKDS+KIHH WMLNELAS
Sbjct: 68 SKLLSECARAISEKDSSKIHHLLWMLNELAS 98
Score = 50.8 bits (120), Expect(2) = 3e-14
Identities = 35/76 (46%), Positives = 43/76 (56%), Gaps = 6/76 (7%)
Frame = +1
Query: 7 MDISFFNVKET-TFFLHMISSSLSNGPQIHMQST-----NNRPQNSHTSTNKSTDSGEAT 168
MDI+ F+ K+T T F S I MQS NN+PQ SHTST++S+DSGEA
Sbjct: 1 MDITLFSPKDTLTHFFPSHQQSNDQVAAIDMQSNSSNNNNNQPQTSHTSTSRSSDSGEAC 60
Query: 169 GDNGGGSKK*WAPSFL 216
GGG+K WA L
Sbjct: 61 ---GGGNK--WASKLL 71
>ref|XP_006442965.1| hypothetical protein CICLE_v10020072mg [Citrus clementina]
gi|568850072|ref|XP_006478752.1| PREDICTED: protein
SHORT-ROOT-like [Citrus sinensis]
gi|557545227|gb|ESR56205.1| hypothetical protein
CICLE_v10020072mg [Citrus clementina]
Length = 460
Score = 53.1 bits (126), Expect(2) = 7e-14
Identities = 24/31 (77%), Positives = 28/31 (90%)
Frame = +3
Query: 204 SELLRECAIAISEKDSNKIHHSFWMLNELAS 296
S+LL+ECA AIS+KDS+KIHH WMLNELAS
Sbjct: 75 SKLLKECARAISDKDSSKIHHLLWMLNELAS 105
Score = 49.3 bits (116), Expect(2) = 7e-14
Identities = 37/80 (46%), Positives = 45/80 (56%), Gaps = 10/80 (12%)
Frame = +1
Query: 7 MDISFFNVKETT----FFLHMISSSLSNGPQI--HMQSTNN---RPQNS-HTSTNKSTDS 156
MDI+ F+ K T F L SNG QI MQ+ NN +PQNS HTST++S+DS
Sbjct: 1 MDITLFSPKGTHSHHFFSLSNQQLQQSNGDQIALDMQTNNNNNIQPQNSCHTSTSRSSDS 60
Query: 157 GEATGDNGGGSKK*WAPSFL 216
GE D GG+K WA L
Sbjct: 61 GEPCADTTGGNK--WASKLL 78
>ref|XP_002327997.1| GRAS family transcription factor [Populus trichocarpa]
Length = 411
Score = 53.1 bits (126), Expect(2) = 6e-12
Identities = 25/31 (80%), Positives = 27/31 (87%)
Frame = +3
Query: 204 SELLRECAIAISEKDSNKIHHSFWMLNELAS 296
S+LL ECA AISEKDS+KIHH WMLNELAS
Sbjct: 38 SKLLSECARAISEKDSSKIHHLLWMLNELAS 68
Score = 42.7 bits (99), Expect(2) = 6e-12
Identities = 22/39 (56%), Positives = 28/39 (71%)
Frame = +1
Query: 100 STNNRPQNSHTSTNKSTDSGEATGDNGGGSKK*WAPSFL 216
+ NN+PQ SHTST++S+DSGEA GGG+K WA L
Sbjct: 8 NNNNQPQTSHTSTSRSSDSGEAC---GGGNK--WASKLL 41
>gb|EMJ22811.1| hypothetical protein PRUPE_ppa1027119mg [Prunus persica]
Length = 449
Score = 49.7 bits (117), Expect(2) = 1e-10
Identities = 23/31 (74%), Positives = 26/31 (83%)
Frame = +3
Query: 204 SELLRECAIAISEKDSNKIHHSFWMLNELAS 296
S LL ECA A+SEKDS+KI+H WMLNELAS
Sbjct: 64 SRLLMECARAVSEKDSSKINHLLWMLNELAS 94
Score = 41.6 bits (96), Expect(2) = 1e-10
Identities = 28/55 (50%), Positives = 33/55 (60%), Gaps = 3/55 (5%)
Frame = +1
Query: 7 MDISFF--NVKETTFFLHMISSSLSNG-PQIHMQSTNNRPQNSHTSTNKSTDSGE 162
MDIS F N KE F + NG I MQSTN +PQNSHTST++S+ S E
Sbjct: 1 MDISLFSTNNKEANFLQQYSNQIKINGLAAIDMQSTN-QPQNSHTSTSRSSGSSE 54
>gb|EOY04802.1| GRAS family transcription factor [Theobroma cacao]
Length = 457
Score = 53.5 bits (127), Expect(2) = 2e-10
Identities = 25/31 (80%), Positives = 26/31 (83%)
Frame = +3
Query: 204 SELLRECAIAISEKDSNKIHHSFWMLNELAS 296
S LLRECA AIS+KDS KIHH WMLNELAS
Sbjct: 83 SRLLRECARAISDKDSTKIHHLLWMLNELAS 113
Score = 37.4 bits (85), Expect(2) = 2e-10
Identities = 19/32 (59%), Positives = 27/32 (84%), Gaps = 3/32 (9%)
Frame = +1
Query: 88 IHMQSTNN-RPQNSHTSTNKSTDSGE--ATGD 174
+ M +TN+ +PQNSHTST++S+DSGE ATG+
Sbjct: 48 VDMHNTNSIQPQNSHTSTSRSSDSGEPCATGN 79
>ref|XP_002309782.1| hypothetical protein POPTR_0007s01650g [Populus trichocarpa]
gi|222852685|gb|EEE90232.1| hypothetical protein
POPTR_0007s01650g [Populus trichocarpa]
Length = 411
Score = 50.1 bits (118), Expect(2) = 3e-10
Identities = 24/31 (77%), Positives = 26/31 (83%)
Frame = +3
Query: 204 SELLRECAIAISEKDSNKIHHSFWMLNELAS 296
S LL ECA AISEKDS+KIH+ WMLNELAS
Sbjct: 38 SRLLSECARAISEKDSSKIHNLLWMLNELAS 68
Score = 40.0 bits (92), Expect(2) = 3e-10
Identities = 21/39 (53%), Positives = 27/39 (69%)
Frame = +1
Query: 100 STNNRPQNSHTSTNKSTDSGEATGDNGGGSKK*WAPSFL 216
+ NN+PQ SHTST++S+DSGEA G G+K WA L
Sbjct: 8 NNNNQPQTSHTSTSRSSDSGEAC---GAGNK--WASRLL 41
>ref|XP_004165311.1| PREDICTED: LOW QUALITY PROTEIN: protein SHORT-ROOT-like [Cucumis
sativus]
Length = 459
Score = 55.5 bits (132), Expect = 7e-06
Identities = 26/31 (83%), Positives = 27/31 (87%)
Frame = +3
Query: 204 SELLRECAIAISEKDSNKIHHSFWMLNELAS 296
S LL+ECA AISEKDSNKIHH WMLNELAS
Sbjct: 71 STLLKECARAISEKDSNKIHHFLWMLNELAS 101
>ref|XP_004145036.1| PREDICTED: protein SHORT-ROOT-like [Cucumis sativus]
gi|449471114|ref|XP_004153213.1| PREDICTED: protein
SHORT-ROOT-like [Cucumis sativus]
Length = 459
Score = 55.5 bits (132), Expect = 7e-06
Identities = 26/31 (83%), Positives = 27/31 (87%)
Frame = +3
Query: 204 SELLRECAIAISEKDSNKIHHSFWMLNELAS 296
S LL+ECA AISEKDSNKIHH WMLNELAS
Sbjct: 71 STLLKECARAISEKDSNKIHHFLWMLNELAS 101