BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus22_contig00035381
         (818 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004289445.1| PREDICTED: putative ribonuclease H protein A...    45   2e-07
ref|XP_004301145.1| PREDICTED: putative ribonuclease H protein A...    45   2e-07

>ref|XP_004289445.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
           vesca subsp. vesca]
          Length = 719

 Score = 45.4 bits (106), Expect(2) = 2e-07
 Identities = 23/70 (32%), Positives = 38/70 (54%), Gaps = 7/70 (10%)
 Frame = -1

Query: 713 IWHTPTLNKITTFLW-------LSNLYRLPH*KHLYSRHIFCNHCHNSHQDTIHILRDCP 555
           +W      K+ TF+W       L+N+ R+   +  +S    C  C N+ +  +H+LRDCP
Sbjct: 566 LWKLNCPPKLKTFMWSVLHQKILTNVQRV---RRGFSTIASCPICKNADETLLHLLRDCP 622

Query: 554 QARATWNSSL 525
           +++A WNS L
Sbjct: 623 RSQAIWNSIL 632



 Score = 37.0 bits (84), Expect(2) = 2e-07
 Identities = 14/27 (51%), Positives = 16/27 (59%)
 Frame = -3

Query: 471 HLSVLLNISWATLFSFTCWNIWLHRNK 391
           H+ +  NI W  LF F CW IW  RNK
Sbjct: 656 HVVIKNNIQWCNLFVFVCWFIWKWRNK 682


>ref|XP_004301145.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
           vesca subsp. vesca]
          Length = 411

 Score = 45.4 bits (106), Expect(2) = 2e-07
 Identities = 23/70 (32%), Positives = 38/70 (54%), Gaps = 7/70 (10%)
 Frame = -1

Query: 713 IWHTPTLNKITTFLW-------LSNLYRLPH*KHLYSRHIFCNHCHNSHQDTIHILRDCP 555
           +W      K+ TF+W       L+N+ R+   +  +S    C  C N+ +  +H+LRDCP
Sbjct: 79  LWKLNCPPKLKTFMWYVLHQKILTNVQRV---RRGFSTIASCPICKNADETLLHLLRDCP 135

Query: 554 QARATWNSSL 525
           +++A WNS L
Sbjct: 136 RSQAIWNSIL 145



 Score = 37.0 bits (84), Expect(2) = 2e-07
 Identities = 14/27 (51%), Positives = 16/27 (59%)
 Frame = -3

Query: 471 HLSVLLNISWATLFSFTCWNIWLHRNK 391
           H+ +  NI W  LF F CW IW  RNK
Sbjct: 169 HVVIKNNIQWCNLFVFVCWFIWKWRNK 195