BLASTX nr result
ID: Catharanthus22_contig00035266
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus22_contig00035266
(845 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CCA66009.1| hypothetical protein [Beta vulgaris subsp. vulga... 91 1e-39
ref|XP_006490008.1| PREDICTED: uncharacterized protein LOC102624... 84 3e-36
emb|CAB10337.1| reverse transcriptase like protein [Arabidopsis ... 65 2e-32
gb|ABD28627.2| RNA-directed DNA polymerase (Reverse transcriptas... 61 2e-27
dbj|BAE79385.1| unnamed protein product [Ipomoea batatas] 71 5e-27
dbj|BAE79382.1| unnamed protein product [Ipomoea batatas] 71 5e-27
dbj|BAE79384.1| unnamed protein product [Ipomoea batatas] 70 6e-27
gb|ABW81175.1| non-LTR retrotransposon transposase [Arabidopsis ... 79 4e-26
gb|EMJ14411.1| hypothetical protein PRUPE_ppb013620mg [Prunus pe... 57 7e-25
gb|EOY02376.1| LINE-type retrotransposon LIb DNA, Insertion at t... 61 7e-25
gb|ABD28505.2| RNA-directed DNA polymerase (Reverse transcriptas... 67 1e-24
ref|XP_004289367.1| PREDICTED: putative ribonuclease H protein A... 64 2e-23
emb|CCA66050.1| hypothetical protein [Beta vulgaris subsp. vulga... 63 4e-23
emb|CCA66054.1| hypothetical protein [Beta vulgaris subsp. vulga... 63 2e-22
emb|CCA66044.1| hypothetical protein [Beta vulgaris subsp. vulga... 60 3e-22
gb|AAX95129.1| retrotransposon protein, putative, unclassified [... 54 9e-22
gb|ABA91837.2| retrotransposon protein, putative, unclassified [... 54 9e-22
gb|EEE51789.1| hypothetical protein OsJ_33245 [Oryza sativa Japo... 54 9e-22
gb|AAD32950.1| putative non-LTR retroelement reverse transcripta... 63 4e-21
gb|EOY21798.1| Uncharacterized protein TCM_013937 [Theobroma cacao] 75 5e-21
>emb|CCA66009.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
Length = 1378
Score = 91.3 bits (225), Expect(3) = 1e-39
Identities = 46/114 (40%), Positives = 70/114 (61%)
Frame = -3
Query: 351 VMERILQHFCTVSGRRINIEKSQVLFSASVDQATASGWLLRLASRFLSNFGKYLGMPTIH 172
VM+ L FC SG ++N +KS++ FSA+ LA ++FGKYLG+PTI+
Sbjct: 704 VMKWCLDRFCEASGSKVNEDKSKIYFSANTHLDIRDAVCNTLAMEATADFGKYLGVPTIN 763
Query: 171 ERAGKDTYYFLVEKVRKKLSAWKGKQLSLATRAIIIQTLVSIVANYAIQTSLLP 10
R+ K Y +LV+++ KL+ WK K LS+A RA +IQ+ S + Y +Q++ LP
Sbjct: 764 GRSSKREYQYLVDRINGKLAGWKTKTLSIAGRATLIQSAFSSIPYYTMQSTKLP 817
Score = 64.3 bits (155), Expect(3) = 1e-39
Identities = 27/59 (45%), Positives = 40/59 (67%)
Frame = -3
Query: 843 QCNFIPSRQATNRIFIAQEVFCAMWHWKGSCGFMDIKIDLERTYDRIEWDFLETVLRHL 667
QC+F+P+RQ T+ + I QE+F +M + +G GFM +KID E+ YDR+ W F+ L L
Sbjct: 544 QCSFVPNRQITDNVIIVQEMFHSMRNKQGKKGFMAVKIDFEKAYDRLRWTFIRESLMEL 602
Score = 55.5 bits (132), Expect(3) = 1e-39
Identities = 30/76 (39%), Positives = 43/76 (56%), Gaps = 5/76 (6%)
Frame = -2
Query: 670 LGFDEHLIQLIMKGTTLTSLSILWNGEKKFESFKASRGIRQGDTLFPYLFVFCMDI*AKG 491
L +HL+ ++M + +L ILWNGE E +RG+RQGD L PYL+V CM+ A
Sbjct: 602 LRIPQHLVDIVMNCVSSANLQILWNGEP-MEKICPTRGLRQGDPLSPYLYVICMERLAHL 660
Query: 490 LMQQ-----WKRVNGN 458
+ Q+ WK V +
Sbjct: 661 IDQEVTNGNWKPVKAS 676
>ref|XP_006490008.1| PREDICTED: uncharacterized protein LOC102624085 [Citrus sinensis]
Length = 1635
Score = 84.3 bits (207), Expect(3) = 3e-36
Identities = 41/115 (35%), Positives = 66/115 (57%)
Frame = -3
Query: 354 LVMERILQHFCTVSGRRINIEKSQVLFSASVDQATASGWLLRLASRFLSNFGKYLGMPTI 175
+++ +I+ F SG ++N K+ V FSA++ AS L N GKYLG+P
Sbjct: 1193 IIINKIIDEFSASSGAKVNKSKTLVYFSANISAMEASRIGSDLGYSVTDNLGKYLGVPLC 1252
Query: 174 HERAGKDTYYFLVEKVRKKLSAWKGKQLSLATRAIIIQTLVSIVANYAIQTSLLP 10
H R K TY +V+K+ ++LS W L+LA R + Q+++ ++ YA+QT+ LP
Sbjct: 1253 HSRISKQTYQSIVDKIDQRLSGWNASHLTLAGRITLAQSVLQAISVYAMQTTKLP 1307
Score = 61.2 bits (147), Expect(3) = 3e-36
Identities = 27/61 (44%), Positives = 38/61 (62%)
Frame = -3
Query: 843 QCNFIPSRQATNRIFIAQEVFCAMWHWKGSCGFMDIKIDLERTYDRIEWDFLETVLRHLG 664
Q +F+P R T I +AQE+ +M KG GFM IK+DL + YDR+ W F++ L+ L
Sbjct: 1034 QTSFVPGRHITENIIVAQEIIHSMRRKKGRKGFMAIKVDLGKAYDRLSWTFIQETLQELN 1093
Query: 663 L 661
L
Sbjct: 1094 L 1094
Score = 54.3 bits (129), Expect(3) = 3e-36
Identities = 28/67 (41%), Positives = 41/67 (61%), Gaps = 5/67 (7%)
Frame = -2
Query: 652 LIQLIMKGTTLTSLSILWNGEKKFESFKASRGIRQGDTLFPYLFVFCMDI*AKGLMQ--- 482
LI LIM+ T ++++LWNGE E F RG+RQGD L PY+FV C++ + G+ +
Sbjct: 1098 LINLIMECITTATMNVLWNGELSSE-FCPGRGVRQGDPLSPYIFVLCIERLSHGISRSIQ 1156
Query: 481 --QWKRV 467
WK +
Sbjct: 1157 QGHWKPI 1163
>emb|CAB10337.1| reverse transcriptase like protein [Arabidopsis thaliana]
gi|7268307|emb|CAB78601.1| reverse transcriptase like
protein [Arabidopsis thaliana]
Length = 929
Score = 65.1 bits (157), Expect(4) = 2e-32
Identities = 32/101 (31%), Positives = 57/101 (56%)
Frame = -3
Query: 309 RRINIEKSQVLFSASVDQATASGWLLRLASRFLSNFGKYLGMPTIHERAGKDTYYFLVEK 130
+++++EKS++ FS +V + GKYLGMP + +R KDT+ ++E+
Sbjct: 510 QKVSLEKSKIFFSNNVSRDLEGLITAETGIGSTRELGKYLGMPVLQKRINKDTFGEVLER 569
Query: 129 VRKKLSAWKGKQLSLATRAIIIQTLVSIVANYAIQTSLLPA 7
V +LS WK + LSLA R + + ++ + + + + LLPA
Sbjct: 570 VSSRLSGWKSRSLSLAGRITLTKAVLMSIPIHTMSSILLPA 610
Score = 57.4 bits (137), Expect(4) = 2e-32
Identities = 28/61 (45%), Positives = 37/61 (60%)
Frame = -3
Query: 843 QCNFIPSRQATNRIFIAQEVFCAMWHWKGSCGFMDIKIDLERTYDRIEWDFLETVLRHLG 664
Q +FIP R + + I + QE +M KG G+M +K+DLE+ YDRI WDFL L G
Sbjct: 353 QASFIPGRLSFDNIVVVQEAVHSMRRKKGRKGWMLLKLDLEKAYDRIRWDFLAETLEAAG 412
Query: 663 L 661
L
Sbjct: 413 L 413
Score = 53.9 bits (128), Expect(4) = 2e-32
Identities = 26/54 (48%), Positives = 35/54 (64%)
Frame = -2
Query: 667 GFDEHLIQLIMKGTTLTSLSILWNGEKKFESFKASRGIRQGDTLFPYLFVFCMD 506
G E I+ IM+ +S+LWNGEK +SF RG+RQGD + PYLFV C++
Sbjct: 412 GLSEGWIKRIMECVAGPEMSLLWNGEKT-DSFTPERGLRQGDPISPYLFVLCIE 464
Score = 30.8 bits (68), Expect(4) = 2e-32
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = -1
Query: 503 LSQRINAAVETGEWKRISVSRNGPSTLSLVF 411
L +I AV G+WK IS+S+ GP + F
Sbjct: 466 LCHQIETAVGRGDWKSISISQGGPKVSHVCF 496
>gb|ABD28627.2| RNA-directed DNA polymerase (Reverse transcriptase); Ribonuclease H
[Medicago truncatula]
Length = 1296
Score = 61.2 bits (147), Expect(4) = 2e-27
Identities = 29/110 (26%), Positives = 56/110 (50%)
Frame = -3
Query: 339 ILQHFCTVSGRRINIEKSQVLFSASVDQATASGWLLRLASRFLSNFGKYLGMPTIHERAG 160
+ F SG +INI KS+ +S+ + + + GKYLG P + R
Sbjct: 704 LFDRFSRASGLKINISKSRAYYSSGTPNGKINNLTAISGIQSTTTLGKYLGFPMLQGRPK 763
Query: 159 KDTYYFLVEKVRKKLSAWKGKQLSLATRAIIIQTLVSIVANYAIQTSLLP 10
+ + F++EK++ +L++WK + L+ R + +++S + Y +Q + LP
Sbjct: 764 RSDFNFILEKMQTRLASWKNRLLNRTGRLTLATSVLSTIPTYYMQINWLP 813
Score = 55.8 bits (133), Expect(4) = 2e-27
Identities = 25/54 (46%), Positives = 36/54 (66%)
Frame = -2
Query: 667 GFDEHLIQLIMKGTTLTSLSILWNGEKKFESFKASRGIRQGDTLFPYLFVFCMD 506
GF + +++LIM + + S+LWNG K FK + G+RQGD L PYLF+ CM+
Sbjct: 599 GFPDIIVKLIMHCVSSANYSLLWNGNK-MPPFKPTHGLRQGDPLSPYLFILCME 651
Score = 47.8 bits (112), Expect(4) = 2e-27
Identities = 22/64 (34%), Positives = 33/64 (51%)
Frame = -3
Query: 843 QCNFIPSRQATNRIFIAQEVFCAMWHWKGSCGFMDIKIDLERTYDRIEWDFLETVLRHLG 664
Q +F+P R + I QE+ M K G++ K+DLE+ +D + WDFL + L G
Sbjct: 540 QSSFLPGRGTADNSIILQEILHFMKRSKRKKGYVAFKLDLEKAFDNVNWDFLNSCLLDFG 599
Query: 663 LMSI 652
I
Sbjct: 600 FPDI 603
Score = 24.6 bits (52), Expect(4) = 2e-27
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = -1
Query: 503 LSQRINAAVETGEWKRISVSRNGPSTLSLVF 411
LS I AV G W+ I + +GP L+F
Sbjct: 653 LSVAIQDAVLQGSWEPIHIINDGPQISHLLF 683
>dbj|BAE79385.1| unnamed protein product [Ipomoea batatas]
Length = 1366
Score = 70.9 bits (172), Expect(3) = 5e-27
Identities = 37/116 (31%), Positives = 66/116 (56%), Gaps = 2/116 (1%)
Frame = -3
Query: 351 VMERILQHFCTVSGRRINIEKSQVLFSASVDQAT--ASGWLLRLASRFLSNFGKYLGMPT 178
+M L F SG ++N KS + S++V+ A G +L++ + G YLG+P
Sbjct: 702 IMFDCLDSFSNASGLKVNFSKSLLFCSSNVNAGLKRAIGSILQVP--VAESLGTYLGIPM 759
Query: 177 IHERAGKDTYYFLVEKVRKKLSAWKGKQLSLATRAIIIQTLVSIVANYAIQTSLLP 10
+ ER ++T+ +++K+R KLS+WK L++A R +++Q ++ V Y +Q LP
Sbjct: 760 LKERVSRNTFNAVIDKMRTKLSSWKASSLNMAGRRVLVQASLATVPTYTMQVMALP 815
Score = 52.0 bits (123), Expect(3) = 5e-27
Identities = 32/73 (43%), Positives = 40/73 (54%), Gaps = 5/73 (6%)
Frame = -2
Query: 667 GFDEHLIQLIMKGTTLTSLSILWNGEKKFESFKASRGIRQGDTLFPYLFVFCM-----DI 503
GF LI LI+ +SL+ILWNG + FK RG+RQGD L PYLF M DI
Sbjct: 601 GFPRRLIDLILFSLQESSLAILWNGGR-LPPFKPGRGLRQGDPLAPYLFNLVMERLAHDI 659
Query: 502 *AKGLMQQWKRVN 464
+ + WK V+
Sbjct: 660 QTRVNARTWKPVH 672
Score = 45.8 bits (107), Expect(3) = 5e-27
Identities = 20/60 (33%), Positives = 34/60 (56%)
Frame = -3
Query: 843 QCNFIPSRQATNRIFIAQEVFCAMWHWKGSCGFMDIKIDLERTYDRIEWDFLETVLRHLG 664
Q +F+P R + + + QEV +M + + M +K+DL++ YD + WD+LE L G
Sbjct: 542 QNSFLPGRSTMDNVILTQEVVHSMNNPRRKKKQMILKVDLQKAYDSVSWDYLEETLEDFG 601
>dbj|BAE79382.1| unnamed protein product [Ipomoea batatas]
Length = 1366
Score = 70.9 bits (172), Expect(3) = 5e-27
Identities = 37/116 (31%), Positives = 66/116 (56%), Gaps = 2/116 (1%)
Frame = -3
Query: 351 VMERILQHFCTVSGRRINIEKSQVLFSASVDQAT--ASGWLLRLASRFLSNFGKYLGMPT 178
+M L F SG ++N KS + S++V+ A G +L++ + G YLG+P
Sbjct: 702 IMFDCLDSFSNASGLKVNFSKSLLFCSSNVNAGLKRAIGSILQVP--VAESLGTYLGIPM 759
Query: 177 IHERAGKDTYYFLVEKVRKKLSAWKGKQLSLATRAIIIQTLVSIVANYAIQTSLLP 10
+ ER ++T+ +++K+R KLS+WK L++A R +++Q ++ V Y +Q LP
Sbjct: 760 LKERVSRNTFNAVIDKMRTKLSSWKASSLNMAGRRVLVQASLATVPTYTMQVMALP 815
Score = 52.0 bits (123), Expect(3) = 5e-27
Identities = 32/73 (43%), Positives = 40/73 (54%), Gaps = 5/73 (6%)
Frame = -2
Query: 667 GFDEHLIQLIMKGTTLTSLSILWNGEKKFESFKASRGIRQGDTLFPYLFVFCM-----DI 503
GF LI LI+ +SL+ILWNG + FK RG+RQGD L PYLF M DI
Sbjct: 601 GFPRRLIDLILFSLQESSLAILWNGGR-LPPFKPGRGLRQGDPLAPYLFNLVMERLAHDI 659
Query: 502 *AKGLMQQWKRVN 464
+ + WK V+
Sbjct: 660 QTRVNARTWKPVH 672
Score = 45.8 bits (107), Expect(3) = 5e-27
Identities = 20/60 (33%), Positives = 34/60 (56%)
Frame = -3
Query: 843 QCNFIPSRQATNRIFIAQEVFCAMWHWKGSCGFMDIKIDLERTYDRIEWDFLETVLRHLG 664
Q +F+P R + + + QEV +M + + M +K+DL++ YD + WD+LE L G
Sbjct: 542 QNSFLPGRSTMDNVILTQEVVHSMNNPRRKKKQMILKVDLQKAYDSVSWDYLEETLEDFG 601
>dbj|BAE79384.1| unnamed protein product [Ipomoea batatas]
Length = 1898
Score = 70.5 bits (171), Expect(3) = 6e-27
Identities = 37/116 (31%), Positives = 66/116 (56%), Gaps = 2/116 (1%)
Frame = -3
Query: 351 VMERILQHFCTVSGRRINIEKSQVLFSASVDQAT--ASGWLLRLASRFLSNFGKYLGMPT 178
+M L F SG ++N KS + S++V+ A G +L++ + G YLG+P
Sbjct: 1234 IMFDCLDSFSDASGLKVNFSKSLLFCSSNVNAGLKRAIGSILQVP--VAESLGTYLGIPM 1291
Query: 177 IHERAGKDTYYFLVEKVRKKLSAWKGKQLSLATRAIIIQTLVSIVANYAIQTSLLP 10
+ ER ++T+ +++K+R KLS+WK L++A R +++Q ++ V Y +Q LP
Sbjct: 1292 LKERVSRNTFNAVIDKMRTKLSSWKASSLNMAGRRVLVQASLATVPTYTMQVMALP 1347
Score = 52.0 bits (123), Expect(3) = 6e-27
Identities = 32/73 (43%), Positives = 40/73 (54%), Gaps = 5/73 (6%)
Frame = -2
Query: 667 GFDEHLIQLIMKGTTLTSLSILWNGEKKFESFKASRGIRQGDTLFPYLFVFCM-----DI 503
GF LI LI+ +SL+ILWNG + FK RG+RQGD L PYLF M DI
Sbjct: 1133 GFPRRLIDLILFSLQESSLAILWNGGRP-PPFKPGRGLRQGDPLVPYLFNLVMERLAHDI 1191
Query: 502 *AKGLMQQWKRVN 464
+ + WK V+
Sbjct: 1192 QTRVNARTWKPVH 1204
Score = 45.8 bits (107), Expect(3) = 6e-27
Identities = 20/60 (33%), Positives = 34/60 (56%)
Frame = -3
Query: 843 QCNFIPSRQATNRIFIAQEVFCAMWHWKGSCGFMDIKIDLERTYDRIEWDFLETVLRHLG 664
Q +F+P R + + + QEV +M + + M +K+DL++ YD + WD+LE L G
Sbjct: 1074 QNSFLPGRSTMDNVILTQEVVHSMNNPRRKKKQMILKVDLQKAYDSVSWDYLEETLEDFG 1133
>gb|ABW81175.1| non-LTR retrotransposon transposase [Arabidopsis cebennensis]
Length = 799
Score = 79.3 bits (194), Expect(3) = 4e-26
Identities = 37/114 (32%), Positives = 68/114 (59%)
Frame = -3
Query: 351 VMERILQHFCTVSGRRINIEKSQVLFSASVDQATASGWLLRLASRFLSNFGKYLGMPTIH 172
V+ ++L+ FC SG+++++EKS++ FS +V + + GKYLGMP +
Sbjct: 153 VVRKVLEKFCIASGQKVSLEKSKIFFSQNVHRDLEKFISDESGIKSTKELGKYLGMPVLQ 212
Query: 171 ERAGKDTYYFLVEKVRKKLSAWKGKQLSLATRAIIIQTLVSIVANYAIQTSLLP 10
+R KDT+ ++ +V +L+ WKG+ LSLA R + ++++S + + + T LP
Sbjct: 213 KRINKDTFGEILLRVSSRLAGWKGRMLSLAGRLTLTKSVLSSIPIHTMSTIALP 266
Score = 55.1 bits (131), Expect(3) = 4e-26
Identities = 27/48 (56%), Positives = 34/48 (70%)
Frame = -2
Query: 649 IQLIMKGTTLTSLSILWNGEKKFESFKASRGIRQGDTLFPYLFVFCMD 506
I IMK ++++LWNGEK ESF SRG+RQGD L PYLFV C++
Sbjct: 58 INWIMKCVKEPAMTVLWNGEKT-ESFIPSRGLRQGDPLSPYLFVLCLE 104
Score = 31.2 bits (69), Expect(3) = 4e-26
Identities = 18/40 (45%), Positives = 23/40 (57%)
Frame = -1
Query: 530 LFICILHGYLSQRINAAVETGEWKRISVSRNGPSTLSLVF 411
LF+ L L +I+ AV T EWK IS+SR GP + F
Sbjct: 98 LFVLCLER-LCHQIDLAVGTKEWKPISMSRGGPLLSHICF 136
>gb|EMJ14411.1| hypothetical protein PRUPE_ppb013620mg [Prunus persica]
Length = 993
Score = 57.0 bits (136), Expect(4) = 7e-25
Identities = 30/81 (37%), Positives = 44/81 (54%)
Frame = -3
Query: 351 VMERILQHFCTVSGRRINIEKSQVLFSASVDQATASGWLLRLASRFLSNFGKYLGMPTIH 172
VM+ L FC+ SG+ +N KS + S + + A S N GKYLG+P +H
Sbjct: 912 VMKNCLDLFCSASGQAVNFAKSVIFCSPNTCKMVAKEIGAICGSPITENLGKYLGLPLLH 971
Query: 171 ERAGKDTYYFLVEKVRKKLSA 109
R K TY L++KV+ +L+A
Sbjct: 972 SRVTKVTYNGLLDKVQSRLAA 992
Score = 50.8 bits (120), Expect(4) = 7e-25
Identities = 25/59 (42%), Positives = 34/59 (57%)
Frame = -3
Query: 837 NFIPSRQATNRIFIAQEVFCAMWHWKGSCGFMDIKIDLERTYDRIEWDFLETVLRHLGL 661
+F+P R T+ I IAQE+ KG KIDL + YDR+ W F+E+VL +GL
Sbjct: 754 SFVPGRHITDNIMIAQELMHKFKLAKGKKRMFAWKIDLSKAYDRLNWGFIESVLLEVGL 812
Score = 44.3 bits (103), Expect(4) = 7e-25
Identities = 24/55 (43%), Positives = 30/55 (54%)
Frame = -2
Query: 670 LGFDEHLIQLIMKGTTLTSLSILWNGEKKFESFKASRGIRQGDTLFPYLFVFCMD 506
+G IQLIM+ + I NGE + F GIRQGD L PYLFV C++
Sbjct: 810 VGLPNSFIQLIMQCVSTMRYQICINGELT-DPFSPGNGIRQGDPLSPYLFVLCIE 863
Score = 28.9 bits (63), Expect(4) = 7e-25
Identities = 16/31 (51%), Positives = 17/31 (54%)
Frame = -1
Query: 503 LSQRINAAVETGEWKRISVSRNGPSTLSLVF 411
LS I AV+ WK I SRNGPS L F
Sbjct: 865 LSHIIVDAVKRKLWKPIKTSRNGPSVSHLFF 895
>gb|EOY02376.1| LINE-type retrotransposon LIb DNA, Insertion at the S11 site-like
protein [Theobroma cacao]
Length = 620
Score = 60.8 bits (146), Expect(3) = 7e-25
Identities = 33/114 (28%), Positives = 57/114 (50%)
Frame = -3
Query: 351 VMERILQHFCTVSGRRINIEKSQVLFSASVDQATASGWLLRLASRFLSNFGKYLGMPTIH 172
V++ +L+ FC ++ I KS S +V + + GKY+G+P +H
Sbjct: 275 VIKGVLEDFCACLRGKVCIAKSTFFCSKNVPMELNIKVKDCSGFSYSDSMGKYIGVPLLH 334
Query: 171 ERAGKDTYYFLVEKVRKKLSAWKGKQLSLATRAIIIQTLVSIVANYAIQTSLLP 10
R Y L++KVR +L AWK LS R ++Q++++ + Y +QT +P
Sbjct: 335 GRKTAHIYKSLIDKVRSRLCAWKASSLSSTGRLTLVQSVLTSIPLYTMQTISIP 388
Score = 54.7 bits (130), Expect(3) = 7e-25
Identities = 33/81 (40%), Positives = 45/81 (55%), Gaps = 9/81 (11%)
Frame = -2
Query: 658 EHLIQLIMKGTTLTSLSILWNGEKKFESFKASRGIRQGDTLFPYLFVFCMDI*AKGLMQ- 482
E++I ++++ S ILWNG FE F SRG+R GD L PYLFV C++ A G+ Q
Sbjct: 177 ENIIDILIRSWNAHSSHILWNGTC-FEKFFPSRGVRLGDPLAPYLFVLCIEKLAHGIKQA 235
Query: 481 ----QWKRV----NGNALVYL 443
WK + +G L YL
Sbjct: 236 VEQEMWKPIRLGKHGPPLTYL 256
Score = 45.8 bits (107), Expect(3) = 7e-25
Identities = 20/52 (38%), Positives = 31/52 (59%)
Frame = -3
Query: 843 QCNFIPSRQATNRIFIAQEVFCAMWHWKGSCGFMDIKIDLERTYDRIEWDFL 688
Q +FI + I + QEV + +G G+M +KIDLE+ YDR+ W+F+
Sbjct: 115 QASFILETHIVDNIIVVQEVVHSFHEKQGRRGWMMVKIDLEKAYDRLRWEFI 166
>gb|ABD28505.2| RNA-directed DNA polymerase (Reverse transcriptase);
Polynucleotidyl transferase, Ribonuclease H fold
[Medicago truncatula]
Length = 729
Score = 67.4 bits (163), Expect(4) = 1e-24
Identities = 36/109 (33%), Positives = 59/109 (54%)
Frame = -3
Query: 336 LQHFCTVSGRRINIEKSQVLFSASVDQATASGWLLRLASRFLSNFGKYLGMPTIHERAGK 157
L FC SG++IN EK+QV FS +VD + +++ GKYLG R +
Sbjct: 133 LDMFCQSSGQKINREKTQVYFSKNVDNHLREDIIQHTGFNQVNSLGKYLGANITPGRTSR 192
Query: 156 DTYYFLVEKVRKKLSAWKGKQLSLATRAIIIQTLVSIVANYAIQTSLLP 10
+ ++ K++ KLS WK + LSLA R + + ++S + Y +Q + +P
Sbjct: 193 GHFNHIINKIQNKLSGWKQQCLSLAGRITLSKFVISSIPYYHMQYAKIP 241
Score = 56.6 bits (135), Expect(4) = 1e-24
Identities = 29/53 (54%), Positives = 34/53 (64%)
Frame = -2
Query: 664 FDEHLIQLIMKGTTLTSLSILWNGEKKFESFKASRGIRQGDTLFPYLFVFCMD 506
F LI +I + S I+WNG+K ESF SRGIRQGD L PYLFV CM+
Sbjct: 28 FPSKLINIIHHCISTPSYKIMWNGDKS-ESFYPSRGIRQGDPLSPYLFVICME 79
Score = 33.5 bits (75), Expect(4) = 1e-24
Identities = 13/24 (54%), Positives = 18/24 (75%)
Frame = -3
Query: 744 MDIKIDLERTYDRIEWDFLETVLR 673
M IKIDLE+ YD + W+F+E L+
Sbjct: 1 MTIKIDLEKAYDLLNWNFVEECLK 24
Score = 22.3 bits (46), Expect(4) = 1e-24
Identities = 12/31 (38%), Positives = 14/31 (45%)
Frame = -1
Query: 503 LSQRINAAVETGEWKRISVSRNGPSTLSLVF 411
LS I VE WK + R GP L+F
Sbjct: 81 LSHIIADQVEADYWKPMRAGRYGPPISHLLF 111
>ref|XP_004289367.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
vesca subsp. vesca]
Length = 1152
Score = 63.9 bits (154), Expect(3) = 2e-23
Identities = 34/118 (28%), Positives = 63/118 (53%)
Frame = -3
Query: 363 KNKLVMERILQHFCTVSGRRINIEKSQVLFSASVDQATASGWLLRLASRFLSNFGKYLGM 184
++ L M+ I + T+SG++IN EKS V FS +V L + + N KYLG+
Sbjct: 452 RDMLCMKDIFVTYETMSGQQINYEKSSVSFSRNVPLWKQHDLAAVLGVQRVENHEKYLGL 511
Query: 183 PTIHERAGKDTYYFLVEKVRKKLSAWKGKQLSLATRAIIIQTLVSIVANYAIQTSLLP 10
PT + + + +L+++VRK+ W+ K LS + ++++ ++ + Y + LP
Sbjct: 512 PTELSYSKDEAFRYLIDRVRKRTQGWRDKTLSGVGKEVLLKAVIQSIPTYVMSCFELP 569
Score = 47.4 bits (111), Expect(3) = 2e-23
Identities = 24/61 (39%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
Frame = -3
Query: 843 QCNFIPSRQATNRIFIAQEV-FCAMWHWKGSCGFMDIKIDLERTYDRIEWDFLETVLRHL 667
Q F+P R ++ +A EV C G G +K+D+ + YDR+EW FLE VL L
Sbjct: 295 QSAFVPGRLISDNSLLAFEVSHCLKCRRSGKVGLCALKLDMSKAYDRVEWCFLEKVLGKL 354
Query: 666 G 664
G
Sbjct: 355 G 355
Score = 45.1 bits (105), Expect(3) = 2e-23
Identities = 24/63 (38%), Positives = 37/63 (58%)
Frame = -2
Query: 670 LGFDEHLIQLIMKGTTLTSLSILWNGEKKFESFKASRGIRQGDTLFPYLFVFCMDI*AKG 491
LGF + ++ IM T S S L NGE + +RG+RQGD + PYLF+ C ++ ++
Sbjct: 354 LGFGDTFVRWIMHCITTVSYSFLVNGEPCGKLIP-TRGLRQGDAISPYLFLLCAEVLSRM 412
Query: 490 LMQ 482
+ Q
Sbjct: 413 IKQ 415
>emb|CCA66050.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
Length = 1357
Score = 62.8 bits (151), Expect(4) = 4e-23
Identities = 37/115 (32%), Positives = 60/115 (52%)
Frame = -3
Query: 354 LVMERILQHFCTVSGRRINIEKSQVLFSASVDQATASGWLLRLASRFLSNFGKYLGMPTI 175
L + IL + SG++IN EKS+V FS V + L R + KYLG+P +
Sbjct: 704 LTIVDILNKYEAASGQKINYEKSEVSFSRGVSCEKKEELITLLHMRQVDRHQKYLGIPAL 763
Query: 174 HERAGKDTYYFLVEKVRKKLSAWKGKQLSLATRAIIIQTLVSIVANYAIQTSLLP 10
R+ K + L++++ KKL WK K LS A + ++I+ ++ + Y + LP
Sbjct: 764 CGRSKKVLFRELLDRMWKKLRGWKEKLLSRAGKEVLIKAVIQALPTYLMGVYKLP 818
Score = 45.1 bits (105), Expect(4) = 4e-23
Identities = 23/61 (37%), Positives = 34/61 (55%), Gaps = 1/61 (1%)
Frame = -3
Query: 843 QCNFIPSRQATNRIFIAQEVFCAMWHWKGSC-GFMDIKIDLERTYDRIEWDFLETVLRHL 667
Q F+P R ++ IA E+F M S G M +K+D+ + YDR+EW FL +L +
Sbjct: 544 QSAFVPGRLISDNSLIALEIFHTMKKRNNSRKGLMAMKLDMSKAYDRVEWGFLRKLLLTM 603
Query: 666 G 664
G
Sbjct: 604 G 604
Score = 43.9 bits (102), Expect(4) = 4e-23
Identities = 23/56 (41%), Positives = 31/56 (55%)
Frame = -2
Query: 673 TLGFDEHLIQLIMKGTTLTSLSILWNGEKKFESFKASRGIRQGDTLFPYLFVFCMD 506
T+GFD + L+M S S + NG + S SRG+RQGD L P+LF+ D
Sbjct: 602 TMGFDGRWVNLVMSCVATVSYSFIING-RVCGSVTPSRGLRQGDPLSPFLFILVAD 656
Score = 23.1 bits (48), Expect(4) = 4e-23
Identities = 14/40 (35%), Positives = 19/40 (47%)
Frame = -1
Query: 530 LFICILHGYLSQRINAAVETGEWKRISVSRNGPSTLSLVF 411
LFI + + SQ + V + E SRNGP L+F
Sbjct: 650 LFILVADAF-SQMVKQKVVSKEIHGAKASRNGPEISHLLF 688
>emb|CCA66054.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
Length = 1355
Score = 63.2 bits (152), Expect(3) = 2e-22
Identities = 34/110 (30%), Positives = 59/110 (53%)
Frame = -3
Query: 339 ILQHFCTVSGRRINIEKSQVLFSASVDQATASGWLLRLASRFLSNFGKYLGMPTIHERAG 160
IL + SG++IN EKS+V +S V + L R + KYLG+P+I R+
Sbjct: 706 ILNQYELASGQKINYEKSEVSYSRGVSVSQKDELTNILNMRQVDRHEKYLGIPSISGRSK 765
Query: 159 KDTYYFLVEKVRKKLSAWKGKQLSLATRAIIIQTLVSIVANYAIQTSLLP 10
K + L++++ KKL WK K LS A + +++++++ + Y + P
Sbjct: 766 KAIFDSLIDRIWKKLQGWKEKLLSRAGKEVLLKSVIQAIPTYLMGVYKFP 815
Score = 46.2 bits (108), Expect(3) = 2e-22
Identities = 24/61 (39%), Positives = 36/61 (59%), Gaps = 1/61 (1%)
Frame = -3
Query: 843 QCNFIPSRQATNRIFIAQEVFCAMWHWKGSC-GFMDIKIDLERTYDRIEWDFLETVLRHL 667
Q F+P R T+ IA EVF +M + S G + +K+D+ + YDR+EW FL +L +
Sbjct: 541 QSAFVPGRLITDNALIAMEVFHSMKNRNRSRKGTIAMKLDMSKAYDRVEWGFLRKLLLTM 600
Query: 666 G 664
G
Sbjct: 601 G 601
Score = 43.9 bits (102), Expect(3) = 2e-22
Identities = 27/73 (36%), Positives = 42/73 (57%), Gaps = 2/73 (2%)
Frame = -2
Query: 673 TLGFDEHLIQLIMKGTTLTSLSILWNGEKKFESFKASRGIRQGDTLFPYLFVFCMDI*AK 494
T+GFD + LIM+ + + S + NG S +RG+RQGD L PYLF+ D +K
Sbjct: 599 TMGFDGRWVNLIMEFVSSVTYSFIINGSV-CGSVVPARGLRQGDPLSPYLFIMVADAFSK 657
Query: 493 GLMQ--QWKRVNG 461
+ + Q K+++G
Sbjct: 658 MIQRKVQDKQLHG 670
>emb|CCA66044.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
Length = 1355
Score = 60.5 bits (145), Expect(3) = 3e-22
Identities = 35/114 (30%), Positives = 61/114 (53%)
Frame = -3
Query: 351 VMERILQHFCTVSGRRINIEKSQVLFSASVDQATASGWLLRLASRFLSNFGKYLGMPTIH 172
++ IL + SG++IN +KS+V FS V A L + + KYLG+P+I
Sbjct: 702 IIVEILNLYEQASGQKINYDKSEVSFSKGVSIAQKEELSNILQMKQVERHMKYLGIPSIT 761
Query: 171 ERAGKDTYYFLVEKVRKKLSAWKGKQLSLATRAIIIQTLVSIVANYAIQTSLLP 10
R+ + L++++ KKL WK K LS A + I++++++ + Y + LP
Sbjct: 762 GRSRTAIFDSLMDRIWKKLQGWKEKLLSRAGKEILLKSVIQAIPTYLMGVYKLP 815
Score = 48.9 bits (115), Expect(3) = 3e-22
Identities = 25/61 (40%), Positives = 36/61 (59%), Gaps = 1/61 (1%)
Frame = -3
Query: 843 QCNFIPSRQATNRIFIAQEVFCAMWHWKGSC-GFMDIKIDLERTYDRIEWDFLETVLRHL 667
Q F+P R T+ IA EVF +M H S G + +K+D+ + YDR+EW FL +L +
Sbjct: 541 QSAFVPGRLITDNALIAMEVFHSMKHRNRSRKGTIAMKLDMSKAYDRVEWGFLRKLLLTM 600
Query: 666 G 664
G
Sbjct: 601 G 601
Score = 42.7 bits (99), Expect(3) = 3e-22
Identities = 27/73 (36%), Positives = 40/73 (54%), Gaps = 2/73 (2%)
Frame = -2
Query: 673 TLGFDEHLIQLIMKGTTLTSLSILWNGEKKFESFKASRGIRQGDTLFPYLFVFCMDI*AK 494
T+GFD + LIM + S S + NG S +RG+R GD L PYLF+ D +K
Sbjct: 599 TMGFDGRWVNLIMSCVSSVSYSFIINGGV-CGSVTPARGLRHGDPLSPYLFILIADAFSK 657
Query: 493 GLMQ--QWKRVNG 461
+ + Q K+++G
Sbjct: 658 MIQKKVQEKQLHG 670
>gb|AAX95129.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group] gi|62733115|gb|AAX95232.1|
retrotransposon protein, putative, unclassified [Oryza
sativa Japonica Group]
Length = 1324
Score = 54.3 bits (129), Expect(4) = 9e-22
Identities = 31/107 (28%), Positives = 56/107 (52%)
Frame = -3
Query: 348 MERILQHFCTVSGRRINIEKSQVLFSASVDQATASGWLLRLASRFLSNFGKYLGMPTIHE 169
++ +L + SG IN EKS ++FS ++ + ++ L + KYLG+P
Sbjct: 1156 LQNVLSLYERCSGETINKEKSSIMFSRNIKEVNKQIFMGALDIGVGAWNEKYLGLPVYMG 1215
Query: 168 RAGKDTYYFLVEKVRKKLSAWKGKQLSLATRAIIIQTLVSIVANYAI 28
R+ T +L E+V KK+ WK K LS A + ++I+ + + +A+
Sbjct: 1216 RSKAKTSSYLKERVWKKIQGWKEKLLSRAGKDVLIKAVAQAIPAFAM 1262
Score = 46.2 bits (108), Expect(4) = 9e-22
Identities = 23/61 (37%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Frame = -3
Query: 843 QCNFIPSRQATNRIFIAQEVFCAM-WHWKGSCGFMDIKIDLERTYDRIEWDFLETVLRHL 667
Q F+P R T+ I +A E+ + +GS GF +K + + YDR+EW FLE ++ L
Sbjct: 994 QIAFVPQRMITDNILLAYELTHFLKTKRRGSVGFAAVKQGMSKAYDRVEWGFLEKMMLKL 1053
Query: 666 G 664
G
Sbjct: 1054 G 1054
Score = 43.1 bits (100), Expect(4) = 9e-22
Identities = 22/55 (40%), Positives = 31/55 (56%)
Frame = -2
Query: 670 LGFDEHLIQLIMKGTTLTSLSILWNGEKKFESFKASRGIRQGDTLFPYLFVFCMD 506
LGFD + + ++MK T + I NGE E + G+RQGD + PYLF C +
Sbjct: 1053 LGFDRNWVFIVMKCVTSVTYRIKVNGEFT-EQINPTGGLRQGDPISPYLFFICAE 1106
Score = 26.6 bits (57), Expect(4) = 9e-22
Identities = 16/40 (40%), Positives = 21/40 (52%)
Frame = -1
Query: 530 LFICILHGYLSQRINAAVETGEWKRISVSRNGPSTLSLVF 411
LF G+ S +NAA E G+ I V +N PS L+F
Sbjct: 1100 LFFICAEGF-STLLNAAEERGDLSVIKVCQNAPSINHLLF 1138
>gb|ABA91837.2| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1301
Score = 54.3 bits (129), Expect(4) = 9e-22
Identities = 31/107 (28%), Positives = 56/107 (52%)
Frame = -3
Query: 348 MERILQHFCTVSGRRINIEKSQVLFSASVDQATASGWLLRLASRFLSNFGKYLGMPTIHE 169
++ +L + SG IN EKS ++FS ++ + ++ L + KYLG+P
Sbjct: 1133 LQNVLSLYERCSGETINKEKSSIMFSRNIKEVNKQIFMGALDIGVGAWNEKYLGLPVYMG 1192
Query: 168 RAGKDTYYFLVEKVRKKLSAWKGKQLSLATRAIIIQTLVSIVANYAI 28
R+ T +L E+V KK+ WK K LS A + ++I+ + + +A+
Sbjct: 1193 RSKAKTSSYLKERVWKKIQGWKEKLLSRAGKDVLIKAVAQAIPAFAM 1239
Score = 46.2 bits (108), Expect(4) = 9e-22
Identities = 23/61 (37%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Frame = -3
Query: 843 QCNFIPSRQATNRIFIAQEVFCAM-WHWKGSCGFMDIKIDLERTYDRIEWDFLETVLRHL 667
Q F+P R T+ I +A E+ + +GS GF +K + + YDR+EW FLE ++ L
Sbjct: 971 QIAFVPQRMITDNILLAYELTHFLKTKRRGSVGFAAVKQGMSKAYDRVEWGFLEKMMLKL 1030
Query: 666 G 664
G
Sbjct: 1031 G 1031
Score = 43.1 bits (100), Expect(4) = 9e-22
Identities = 22/55 (40%), Positives = 31/55 (56%)
Frame = -2
Query: 670 LGFDEHLIQLIMKGTTLTSLSILWNGEKKFESFKASRGIRQGDTLFPYLFVFCMD 506
LGFD + + ++MK T + I NGE E + G+RQGD + PYLF C +
Sbjct: 1030 LGFDRNWVFIVMKCVTSVTYRIKVNGEFT-EQINPTGGLRQGDPISPYLFFICAE 1083
Score = 26.6 bits (57), Expect(4) = 9e-22
Identities = 16/40 (40%), Positives = 21/40 (52%)
Frame = -1
Query: 530 LFICILHGYLSQRINAAVETGEWKRISVSRNGPSTLSLVF 411
LF G+ S +NAA E G+ I V +N PS L+F
Sbjct: 1077 LFFICAEGF-STLLNAAEERGDLSVIKVCQNAPSINHLLF 1115
>gb|EEE51789.1| hypothetical protein OsJ_33245 [Oryza sativa Japonica Group]
Length = 825
Score = 54.3 bits (129), Expect(4) = 9e-22
Identities = 31/107 (28%), Positives = 56/107 (52%)
Frame = -3
Query: 348 MERILQHFCTVSGRRINIEKSQVLFSASVDQATASGWLLRLASRFLSNFGKYLGMPTIHE 169
++ +L + SG IN EKS ++FS ++ + ++ L + KYLG+P
Sbjct: 657 LQNVLSLYERCSGETINKEKSSIMFSRNIKEVNKQIFMGALDIGVGAWNEKYLGLPVYMG 716
Query: 168 RAGKDTYYFLVEKVRKKLSAWKGKQLSLATRAIIIQTLVSIVANYAI 28
R+ T +L E+V KK+ WK K LS A + ++I+ + + +A+
Sbjct: 717 RSKAKTSSYLKERVWKKIQGWKEKLLSRAGKDVLIKAVAQAIPAFAM 763
Score = 46.2 bits (108), Expect(4) = 9e-22
Identities = 23/61 (37%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Frame = -3
Query: 843 QCNFIPSRQATNRIFIAQEVFCAM-WHWKGSCGFMDIKIDLERTYDRIEWDFLETVLRHL 667
Q F+P R T+ I +A E+ + +GS GF +K + + YDR+EW FLE ++ L
Sbjct: 495 QIAFVPQRMITDNILLAYELTHFLKTKRRGSVGFAAVKQGMSKAYDRVEWGFLEKMMLKL 554
Query: 666 G 664
G
Sbjct: 555 G 555
Score = 43.1 bits (100), Expect(4) = 9e-22
Identities = 22/55 (40%), Positives = 31/55 (56%)
Frame = -2
Query: 670 LGFDEHLIQLIMKGTTLTSLSILWNGEKKFESFKASRGIRQGDTLFPYLFVFCMD 506
LGFD + + ++MK T + I NGE E + G+RQGD + PYLF C +
Sbjct: 554 LGFDRNWVFIVMKCVTSVTYRIKVNGEFT-EQINPTGGLRQGDPISPYLFFICAE 607
Score = 26.6 bits (57), Expect(4) = 9e-22
Identities = 16/40 (40%), Positives = 21/40 (52%)
Frame = -1
Query: 530 LFICILHGYLSQRINAAVETGEWKRISVSRNGPSTLSLVF 411
LF G+ S +NAA E G+ I V +N PS L+F
Sbjct: 601 LFFICAEGF-STLLNAAEERGDLSVIKVCQNAPSINHLLF 639
>gb|AAD32950.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 773
Score = 62.8 bits (151), Expect(4) = 4e-21
Identities = 31/115 (26%), Positives = 61/115 (53%)
Frame = -3
Query: 354 LVMERILQHFCTVSGRRINIEKSQVLFSASVDQATASGWLLRLASRFLSNFGKYLGMPTI 175
+ + +L+ + SG+ +N +KS +LF +D T+ L FG+YLG+P
Sbjct: 152 MTLVNVLKLYEKASGQAVNFQKSAILFGKGLDFRTSEQLSQLLGIYKTEGFGRYLGLPEF 211
Query: 174 HERAGKDTYYFLVEKVRKKLSAWKGKQLSLATRAIIIQTLVSIVANYAIQTSLLP 10
R + + F+ + + +K+ W K LS A + ++I+++V+ + Y++ LLP
Sbjct: 212 VGRNKTNAFSFIAQTMDQKMDNWYNKLLSPAGKEVLIKSIVTAIPTYSMSCFLLP 266
Score = 42.4 bits (98), Expect(4) = 4e-21
Identities = 23/55 (41%), Positives = 30/55 (54%)
Frame = -2
Query: 670 LGFDEHLIQLIMKGTTLTSLSILWNGEKKFESFKASRGIRQGDTLFPYLFVFCMD 506
+GF E IM T T+ SIL NG+ RGIRQGD + PYL++ C +
Sbjct: 51 MGFSEKWCNWIMTCITTTTYSILINGQP-VRRIIPKRGIRQGDPISPYLYLLCTE 104
Score = 38.9 bits (89), Expect(4) = 4e-21
Identities = 16/50 (32%), Positives = 31/50 (62%)
Frame = -3
Query: 813 TNRIFIAQEVFCAMWHWKGSCGFMDIKIDLERTYDRIEWDFLETVLRHLG 664
T+ I IA E+ ++ K F+ K+D+ + +D+IEW F+E +++ +G
Sbjct: 3 TDNILIAHELIHSLHTKKLVQPFVATKLDITKAFDKIEWGFIEAIMKQMG 52
Score = 23.9 bits (50), Expect(4) = 4e-21
Identities = 14/40 (35%), Positives = 20/40 (50%), Gaps = 7/40 (17%)
Frame = -1
Query: 503 LSQRINAAVETGEWKRISVSRNGPSTL-------SLVFCR 405
LS I A+++ + SRNGP+ SLVFC+
Sbjct: 106 LSALIQASIKAKQLHGFKASRNGPAISHLLFAHDSLVFCK 145
>gb|EOY21798.1| Uncharacterized protein TCM_013937 [Theobroma cacao]
Length = 309
Score = 75.5 bits (184), Expect(3) = 5e-21
Identities = 39/117 (33%), Positives = 63/117 (53%)
Frame = -3
Query: 363 KNKLVMERILQHFCTVSGRRINIEKSQVLFSASVDQATASGWLLRLASRFLSNFGKYLGM 184
K VM + L F VSG+++ + K ++L S+ V A + +FGKY G
Sbjct: 183 KQVQVMMKTLDRFYLVSGQKVGLSKWRLLVSSKVSPVKAKNLSSIAKTTLTKDFGKYHGA 242
Query: 183 PTIHERAGKDTYYFLVEKVRKKLSAWKGKQLSLATRAIIIQTLVSIVANYAIQTSLL 13
P HER + TY L+ +V+ ++ +W K LS+A R ++Q++ S A Y +QT+ L
Sbjct: 243 PATHERITQTTYSELINEVQLRMESWSNKYLSVAGRISLVQSVTSTTATYPMQTTFL 299
Score = 46.2 bits (108), Expect(3) = 5e-21
Identities = 20/37 (54%), Positives = 27/37 (72%)
Frame = -2
Query: 616 SLSILWNGEKKFESFKASRGIRQGDTLFPYLFVFCMD 506
+ SI+WNG + +F +RGIRQGD L PYLFV C++
Sbjct: 103 TFSIIWNGTRT-NTFSRTRGIRQGDPLSPYLFVLCLE 138
Score = 26.6 bits (57), Expect(3) = 5e-21
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = -1
Query: 530 LFICILHGYLSQRINAAVETGEWKRISVSRNGP 432
LF+ L LSQ I+ V G W+ + ++RNGP
Sbjct: 132 LFVLCLEK-LSQLIDNKVWLGNWRPLLLTRNGP 163