BLASTX nr result
ID: Catharanthus22_contig00035197
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus22_contig00035197
(600 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002264763.2| PREDICTED: polypyrimidine tract-binding prot... 59 1e-06
ref|XP_002264689.2| PREDICTED: polypyrimidine tract-binding prot... 59 1e-06
ref|XP_003619163.1| Polypyrimidine tract-binding protein-like pr... 59 1e-06
ref|XP_003619162.1| Polypyrimidine tract-binding protein-like pr... 59 1e-06
emb|CBI18226.3| unnamed protein product [Vitis vinifera] 59 1e-06
gb|EXC12325.1| Polypyrimidine tract-binding protein-3-like prote... 58 2e-06
ref|XP_006473080.1| PREDICTED: polypyrimidine tract-binding prot... 58 2e-06
ref|XP_006473079.1| PREDICTED: polypyrimidine tract-binding prot... 58 2e-06
ref|XP_006434492.1| hypothetical protein CICLE_v10001148mg [Citr... 58 2e-06
ref|XP_006434490.1| hypothetical protein CICLE_v10001148mg [Citr... 58 2e-06
ref|XP_006386305.1| hypothetical protein POPTR_0002s06660g [Popu... 58 2e-06
ref|XP_002302167.2| polypyrimidine tract-binding family protein ... 58 2e-06
ref|XP_006386304.1| hypothetical protein POPTR_0002s06660g [Popu... 58 2e-06
ref|XP_002306709.2| hypothetical protein POPTR_0005s21660g, part... 58 2e-06
gb|EOY16775.1| Polypyrimidine tract-binding protein 3 [Theobroma... 58 2e-06
ref|XP_004496454.1| PREDICTED: polypyrimidine tract-binding prot... 58 2e-06
ref|XP_004496452.1| PREDICTED: polypyrimidine tract-binding prot... 58 2e-06
ref|XP_006303776.1| hypothetical protein CARUB_v10012016mg [Caps... 58 2e-06
ref|XP_004290497.1| PREDICTED: polypyrimidine tract-binding prot... 58 2e-06
ref|XP_004162168.1| PREDICTED: polypyrimidine tract-binding prot... 58 2e-06
>ref|XP_002264763.2| PREDICTED: polypyrimidine tract-binding protein homolog 3 isoform 2
[Vitis vinifera]
Length = 432
Score = 58.9 bits (141), Expect = 1e-06
Identities = 32/50 (64%), Positives = 37/50 (74%), Gaps = 4/50 (8%)
Frame = +1
Query: 1 KLLRNKPDHALVQMGDGFQAELAVNFLKVC----*NPSLNFSYFWSLTLG 138
KLLRNKPDHALVQMGDGFQAELAV+FLK +NFS + ++T G
Sbjct: 276 KLLRNKPDHALVQMGDGFQAELAVHFLKGAMLFGKRLEVNFSKYSNITTG 325
>ref|XP_002264689.2| PREDICTED: polypyrimidine tract-binding protein homolog 3 isoform 1
[Vitis vinifera]
Length = 445
Score = 58.9 bits (141), Expect = 1e-06
Identities = 32/50 (64%), Positives = 37/50 (74%), Gaps = 4/50 (8%)
Frame = +1
Query: 1 KLLRNKPDHALVQMGDGFQAELAVNFLKVC----*NPSLNFSYFWSLTLG 138
KLLRNKPDHALVQMGDGFQAELAV+FLK +NFS + ++T G
Sbjct: 289 KLLRNKPDHALVQMGDGFQAELAVHFLKGAMLFGKRLEVNFSKYSNITTG 338
>ref|XP_003619163.1| Polypyrimidine tract-binding protein-like protein [Medicago
truncatula] gi|355494178|gb|AES75381.1| Polypyrimidine
tract-binding protein-like protein [Medicago truncatula]
Length = 318
Score = 58.9 bits (141), Expect = 1e-06
Identities = 27/29 (93%), Positives = 29/29 (100%)
Frame = +1
Query: 1 KLLRNKPDHALVQMGDGFQAELAVNFLKV 87
KLLRNKPDHALVQMGDGFQAELAV+FLK+
Sbjct: 251 KLLRNKPDHALVQMGDGFQAELAVHFLKI 279
>ref|XP_003619162.1| Polypyrimidine tract-binding protein-like protein [Medicago
truncatula] gi|355494177|gb|AES75380.1| Polypyrimidine
tract-binding protein-like protein [Medicago truncatula]
Length = 354
Score = 58.9 bits (141), Expect = 1e-06
Identities = 27/29 (93%), Positives = 29/29 (100%)
Frame = +1
Query: 1 KLLRNKPDHALVQMGDGFQAELAVNFLKV 87
KLLRNKPDHALVQMGDGFQAELAV+FLK+
Sbjct: 287 KLLRNKPDHALVQMGDGFQAELAVHFLKI 315
>emb|CBI18226.3| unnamed protein product [Vitis vinifera]
Length = 443
Score = 58.9 bits (141), Expect = 1e-06
Identities = 32/50 (64%), Positives = 37/50 (74%), Gaps = 4/50 (8%)
Frame = +1
Query: 1 KLLRNKPDHALVQMGDGFQAELAVNFLKVC----*NPSLNFSYFWSLTLG 138
KLLRNKPDHALVQMGDGFQAELAV+FLK +NFS + ++T G
Sbjct: 287 KLLRNKPDHALVQMGDGFQAELAVHFLKGAMLFGKRLEVNFSKYSNITTG 336
>gb|EXC12325.1| Polypyrimidine tract-binding protein-3-like protein [Morus
notabilis]
Length = 483
Score = 57.8 bits (138), Expect = 2e-06
Identities = 27/28 (96%), Positives = 28/28 (100%)
Frame = +1
Query: 1 KLLRNKPDHALVQMGDGFQAELAVNFLK 84
KLLRNKPDHALVQMGDGFQAELAV+FLK
Sbjct: 327 KLLRNKPDHALVQMGDGFQAELAVHFLK 354
>ref|XP_006473080.1| PREDICTED: polypyrimidine tract-binding protein homolog 3-like
isoform X2 [Citrus sinensis]
Length = 437
Score = 57.8 bits (138), Expect = 2e-06
Identities = 27/28 (96%), Positives = 28/28 (100%)
Frame = +1
Query: 1 KLLRNKPDHALVQMGDGFQAELAVNFLK 84
KLLRNKPDHALVQMGDGFQAELAV+FLK
Sbjct: 276 KLLRNKPDHALVQMGDGFQAELAVHFLK 303
>ref|XP_006473079.1| PREDICTED: polypyrimidine tract-binding protein homolog 3-like
isoform X1 [Citrus sinensis]
Length = 446
Score = 57.8 bits (138), Expect = 2e-06
Identities = 27/28 (96%), Positives = 28/28 (100%)
Frame = +1
Query: 1 KLLRNKPDHALVQMGDGFQAELAVNFLK 84
KLLRNKPDHALVQMGDGFQAELAV+FLK
Sbjct: 285 KLLRNKPDHALVQMGDGFQAELAVHFLK 312
>ref|XP_006434492.1| hypothetical protein CICLE_v10001148mg [Citrus clementina]
gi|557536614|gb|ESR47732.1| hypothetical protein
CICLE_v10001148mg [Citrus clementina]
Length = 437
Score = 57.8 bits (138), Expect = 2e-06
Identities = 27/28 (96%), Positives = 28/28 (100%)
Frame = +1
Query: 1 KLLRNKPDHALVQMGDGFQAELAVNFLK 84
KLLRNKPDHALVQMGDGFQAELAV+FLK
Sbjct: 276 KLLRNKPDHALVQMGDGFQAELAVHFLK 303
>ref|XP_006434490.1| hypothetical protein CICLE_v10001148mg [Citrus clementina]
gi|567883865|ref|XP_006434491.1| hypothetical protein
CICLE_v10001148mg [Citrus clementina]
gi|557536612|gb|ESR47730.1| hypothetical protein
CICLE_v10001148mg [Citrus clementina]
gi|557536613|gb|ESR47731.1| hypothetical protein
CICLE_v10001148mg [Citrus clementina]
Length = 446
Score = 57.8 bits (138), Expect = 2e-06
Identities = 27/28 (96%), Positives = 28/28 (100%)
Frame = +1
Query: 1 KLLRNKPDHALVQMGDGFQAELAVNFLK 84
KLLRNKPDHALVQMGDGFQAELAV+FLK
Sbjct: 285 KLLRNKPDHALVQMGDGFQAELAVHFLK 312
>ref|XP_006386305.1| hypothetical protein POPTR_0002s06660g [Populus trichocarpa]
gi|550344425|gb|ERP64102.1| hypothetical protein
POPTR_0002s06660g [Populus trichocarpa]
Length = 437
Score = 57.8 bits (138), Expect = 2e-06
Identities = 27/28 (96%), Positives = 28/28 (100%)
Frame = +1
Query: 1 KLLRNKPDHALVQMGDGFQAELAVNFLK 84
KLLRNKPDHALVQMGDGFQAELAV+FLK
Sbjct: 277 KLLRNKPDHALVQMGDGFQAELAVHFLK 304
>ref|XP_002302167.2| polypyrimidine tract-binding family protein [Populus trichocarpa]
gi|550344424|gb|EEE81440.2| polypyrimidine tract-binding
family protein [Populus trichocarpa]
Length = 436
Score = 57.8 bits (138), Expect = 2e-06
Identities = 27/28 (96%), Positives = 28/28 (100%)
Frame = +1
Query: 1 KLLRNKPDHALVQMGDGFQAELAVNFLK 84
KLLRNKPDHALVQMGDGFQAELAV+FLK
Sbjct: 276 KLLRNKPDHALVQMGDGFQAELAVHFLK 303
>ref|XP_006386304.1| hypothetical protein POPTR_0002s06660g [Populus trichocarpa]
gi|550344423|gb|ERP64101.1| hypothetical protein
POPTR_0002s06660g [Populus trichocarpa]
Length = 330
Score = 57.8 bits (138), Expect = 2e-06
Identities = 27/28 (96%), Positives = 28/28 (100%)
Frame = +1
Query: 1 KLLRNKPDHALVQMGDGFQAELAVNFLK 84
KLLRNKPDHALVQMGDGFQAELAV+FLK
Sbjct: 170 KLLRNKPDHALVQMGDGFQAELAVHFLK 197
>ref|XP_002306709.2| hypothetical protein POPTR_0005s21660g, partial [Populus
trichocarpa] gi|550339470|gb|EEE93705.2| hypothetical
protein POPTR_0005s21660g, partial [Populus trichocarpa]
Length = 520
Score = 57.8 bits (138), Expect = 2e-06
Identities = 27/28 (96%), Positives = 28/28 (100%)
Frame = +1
Query: 1 KLLRNKPDHALVQMGDGFQAELAVNFLK 84
KLLRNKPDHALVQMGDGFQAELAV+FLK
Sbjct: 360 KLLRNKPDHALVQMGDGFQAELAVHFLK 387
>gb|EOY16775.1| Polypyrimidine tract-binding protein 3 [Theobroma cacao]
Length = 718
Score = 57.8 bits (138), Expect = 2e-06
Identities = 27/28 (96%), Positives = 28/28 (100%)
Frame = +1
Query: 1 KLLRNKPDHALVQMGDGFQAELAVNFLK 84
KLLRNKPDHALVQMGDGFQAELAV+FLK
Sbjct: 557 KLLRNKPDHALVQMGDGFQAELAVHFLK 584
>ref|XP_004496454.1| PREDICTED: polypyrimidine tract-binding protein homolog 3-like
isoform X3 [Cicer arietinum]
Length = 444
Score = 57.8 bits (138), Expect = 2e-06
Identities = 27/28 (96%), Positives = 28/28 (100%)
Frame = +1
Query: 1 KLLRNKPDHALVQMGDGFQAELAVNFLK 84
KLLRNKPDHALVQMGDGFQAELAV+FLK
Sbjct: 288 KLLRNKPDHALVQMGDGFQAELAVHFLK 315
>ref|XP_004496452.1| PREDICTED: polypyrimidine tract-binding protein homolog 3-like
isoform X1 [Cicer arietinum]
gi|502118949|ref|XP_004496453.1| PREDICTED:
polypyrimidine tract-binding protein homolog 3-like
isoform X2 [Cicer arietinum]
Length = 476
Score = 57.8 bits (138), Expect = 2e-06
Identities = 27/28 (96%), Positives = 28/28 (100%)
Frame = +1
Query: 1 KLLRNKPDHALVQMGDGFQAELAVNFLK 84
KLLRNKPDHALVQMGDGFQAELAV+FLK
Sbjct: 320 KLLRNKPDHALVQMGDGFQAELAVHFLK 347
>ref|XP_006303776.1| hypothetical protein CARUB_v10012016mg [Capsella rubella]
gi|482572487|gb|EOA36674.1| hypothetical protein
CARUB_v10012016mg [Capsella rubella]
Length = 420
Score = 57.8 bits (138), Expect = 2e-06
Identities = 27/28 (96%), Positives = 28/28 (100%)
Frame = +1
Query: 1 KLLRNKPDHALVQMGDGFQAELAVNFLK 84
KLLRNKPDHALVQMGDGFQAELAV+FLK
Sbjct: 264 KLLRNKPDHALVQMGDGFQAELAVHFLK 291
>ref|XP_004290497.1| PREDICTED: polypyrimidine tract-binding protein homolog 3-like
[Fragaria vesca subsp. vesca]
Length = 445
Score = 57.8 bits (138), Expect = 2e-06
Identities = 27/28 (96%), Positives = 28/28 (100%)
Frame = +1
Query: 1 KLLRNKPDHALVQMGDGFQAELAVNFLK 84
KLLRNKPDHALVQMGDGFQAELAV+FLK
Sbjct: 289 KLLRNKPDHALVQMGDGFQAELAVHFLK 316
>ref|XP_004162168.1| PREDICTED: polypyrimidine tract-binding protein homolog 3-like
[Cucumis sativus]
Length = 432
Score = 57.8 bits (138), Expect = 2e-06
Identities = 27/28 (96%), Positives = 28/28 (100%)
Frame = +1
Query: 1 KLLRNKPDHALVQMGDGFQAELAVNFLK 84
KLLRNKPDHALVQMGDGFQAELAV+FLK
Sbjct: 276 KLLRNKPDHALVQMGDGFQAELAVHFLK 303