BLASTX nr result

ID: Catharanthus22_contig00035139 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus22_contig00035139
         (868 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAJ53217.1| JHL22C18.10 [Jatropha curcas]                          50   3e-06

>dbj|BAJ53217.1| JHL22C18.10 [Jatropha curcas]
          Length = 495

 Score = 50.1 bits (118), Expect(2) = 3e-06
 Identities = 34/137 (24%), Positives = 63/137 (45%), Gaps = 3/137 (2%)
 Frame = +2

Query: 383 FFR*NNAPCQKLILAQGWMG--QTEELVY*NLVRKFYSSRENMSK*GFTVTLNRKKFKID 556
           FF  N    ++L   QGWM       L Y NLV++FY S +       +V L  +   I 
Sbjct: 82  FFGGNEFNFKELFEFQGWMKFLSLNVLCYENLVKEFYGSLKVCGTEEISVKLRGETRVIS 141

Query: 557 LECLSQAYIIPNEGTLIVEKKDIKSAKTYEAK-FKREAVPNPDSVNNSEVKSSEIKTKYR 733
            +   + + IPN G+ + + KD+     Y+ + F ++ +    +     ++ S +    +
Sbjct: 142 YDDFGRIFNIPNAGSRVTKIKDVSRVSDYKKEDFVKKIMKKVSADKQGSIECSNLTESMK 201

Query: 734 VVHKIFTNFLAPKIGSL 784
            ++KI  +++ PK  SL
Sbjct: 202 WLYKIIVHYIYPKSASL 218



 Score = 28.5 bits (62), Expect(2) = 3e-06
 Identities = 8/24 (33%), Positives = 16/24 (66%)
 Frame = +1

Query: 790 ITSLEWCWIWHVAKKIDFNLCYLL 861
           +  +E C +WH+ +K   NLC+++
Sbjct: 221 VNQVELCIMWHIVEKKPLNLCHIV 244


Top