BLASTX nr result
ID: Catharanthus22_contig00035044
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus22_contig00035044
(329 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AGI63880.1| geranylgeranyl diphosphate synthase IDS6 [Cathara... 171 9e-41
gb|AGL91649.1| geranylgeranyl diphosphate synthase [Catharanthus... 75 1e-11
ref|XP_002283364.1| PREDICTED: geranylgeranyl pyrophosphate synt... 61 1e-07
ref|XP_006856098.1| hypothetical protein AMTR_s00059p00132310 [A... 58 1e-06
gb|ADG01841.1| geranylgeranyl-diphosphate synthase [Medicago sat... 58 2e-06
gb|ACF37217.1| geranylgeranyl diphosphate synthase [Ipomoea bata... 57 3e-06
dbj|BAI47571.1| geranylgeranyl pyrophosphate synthase [Ipomoea s... 57 3e-06
ref|XP_002884145.1| geranylgeranyl diphosphate synthase [Arabido... 57 3e-06
ref|XP_004300598.1| PREDICTED: geranylgeranyl pyrophosphate synt... 56 4e-06
gb|AAV74397.1| geranylgeranyl diphosphate synthase [Adonis aesti... 56 4e-06
gb|EMJ05575.1| hypothetical protein PRUPE_ppa007368mg [Prunus pe... 55 7e-06
ref|XP_003611924.1| Geranylgeranyl pyrophosphate synthase [Medic... 55 7e-06
gb|ACO59905.1| geranylgeranyl pyrophosphate synthase [Elaeagnus ... 55 7e-06
gb|AGN48013.1| geranylgeranyl pyrophosphate synthase [Cucumis melo] 55 1e-05
ref|XP_006282650.1| hypothetical protein CARUB_v10005063mg [Caps... 55 1e-05
ref|XP_004148442.1| PREDICTED: geranylgeranyl pyrophosphate synt... 55 1e-05
>gb|AGI63880.1| geranylgeranyl diphosphate synthase IDS6 [Catharanthus roseus]
Length = 343
Score = 171 bits (433), Expect = 9e-41
Identities = 91/109 (83%), Positives = 91/109 (83%)
Frame = +3
Query: 3 FATATKLGVSSTNTVIMLSELARSMLGAEGLSGGQAIELDLYTKDKSVVRIEQVESVYLQ 182
FATATKLGVSSTNTVIMLSELARSMLGAEGLSGGQAIELDLYTKDKSVVRIEQVESVYLQ
Sbjct: 179 FATATKLGVSSTNTVIMLSELARSMLGAEGLSGGQAIELDLYTKDKSVVRIEQVESVYLQ 238
Query: 183 KTSIGFXXXXXXXXXXXXXXXXXXNRLRKYCKYTGLVYQIKDDILDHEE 329
KTSIGF NRLRKYCKYTGLVYQIKDDILDHEE
Sbjct: 239 KTSIGFEACAVAGAIVGGASEAEINRLRKYCKYTGLVYQIKDDILDHEE 287
>gb|AGL91649.1| geranylgeranyl diphosphate synthase [Catharanthus roseus]
Length = 306
Score = 74.7 bits (182), Expect = 1e-11
Identities = 46/105 (43%), Positives = 65/105 (61%)
Frame = +3
Query: 6 ATATKLGVSSTNTVIMLSELARSMLGAEGLSGGQAIELDLYTKDKSVVRIEQVESVYLQK 185
+TATK GVS TN + ++SEL+R ++GAEG + GQ DL + KS + +EQVE ++L+K
Sbjct: 136 STATK-GVSPTNILRVISELSR-LIGAEGAAAGQVA--DLNSGGKSEIGLEQVEYIHLRK 191
Query: 186 TSIGFXXXXXXXXXXXXXXXXXXNRLRKYCKYTGLVYQIKDDILD 320
T+ N+LRKY KYTGL++Q+ DDILD
Sbjct: 192 TAAFAEAAAVSGAILGGASEEEINKLRKYSKYTGLLFQVVDDILD 236
>ref|XP_002283364.1| PREDICTED: geranylgeranyl pyrophosphate synthase, chloroplastic
[Vitis vinifera]
Length = 371
Score = 61.2 bits (147), Expect = 1e-07
Identities = 39/105 (37%), Positives = 59/105 (56%)
Frame = +3
Query: 6 ATATKLGVSSTNTVIMLSELARSMLGAEGLSGGQAIELDLYTKDKSVVRIEQVESVYLQK 185
ATAT GVSS+ V + ELA+S +GAEGL GQ + D+ + +S V ++Q+E +++ K
Sbjct: 201 ATATS-GVSSSRIVAAVGELAKS-IGAEGLVAGQVV--DISSTGQSDVGLDQLEFIHIHK 256
Query: 186 TSIGFXXXXXXXXXXXXXXXXXXNRLRKYCKYTGLVYQIKDDILD 320
T+ +LRKY + GL++Q+ DDILD
Sbjct: 257 TAALLEAAVVLGALLGGGSDEEVEKLRKYARQVGLLFQVVDDILD 301
>ref|XP_006856098.1| hypothetical protein AMTR_s00059p00132310 [Amborella trichopoda]
gi|548859957|gb|ERN17565.1| hypothetical protein
AMTR_s00059p00132310 [Amborella trichopoda]
Length = 336
Score = 58.2 bits (139), Expect = 1e-06
Identities = 36/105 (34%), Positives = 60/105 (57%)
Frame = +3
Query: 6 ATATKLGVSSTNTVIMLSELARSMLGAEGLSGGQAIELDLYTKDKSVVRIEQVESVYLQK 185
AT+T +GVS V ++SELA++ +G+EGL GQ + D+++ S V ++Q+E +++ K
Sbjct: 166 ATST-VGVSPVIVVRVISELAKA-IGSEGLVAGQVV--DIFSAGNSEVGLDQLEFIHVHK 221
Query: 186 TSIGFXXXXXXXXXXXXXXXXXXNRLRKYCKYTGLVYQIKDDILD 320
T+ +LRKY + GL++Q+ DDILD
Sbjct: 222 TAALLEGSVVIGTILGGGSDEEVEKLRKYARCVGLLFQVVDDILD 266
>gb|ADG01841.1| geranylgeranyl-diphosphate synthase [Medicago sativa]
Length = 370
Score = 57.8 bits (138), Expect = 2e-06
Identities = 35/99 (35%), Positives = 54/99 (54%)
Frame = +3
Query: 24 GVSSTNTVIMLSELARSMLGAEGLSGGQAIELDLYTKDKSVVRIEQVESVYLQKTSIGFX 203
GVS V + ELA+S +G+EGL GQ + D+ ++ S V +EQ+E ++L KT+
Sbjct: 205 GVSPARIVRAIGELAKS-IGSEGLVAGQVV--DINSEGLSDVGLEQLEFIHLHKTAALLE 261
Query: 204 XXXXXXXXXXXXXXXXXNRLRKYCKYTGLVYQIKDDILD 320
+LRK+ +Y GL++Q+ DDILD
Sbjct: 262 GAVVLGAILGGGSDEDVEKLRKFARYIGLLFQVVDDILD 300
>gb|ACF37217.1| geranylgeranyl diphosphate synthase [Ipomoea batatas]
Length = 363
Score = 57.0 bits (136), Expect = 3e-06
Identities = 39/105 (37%), Positives = 58/105 (55%)
Frame = +3
Query: 6 ATATKLGVSSTNTVIMLSELARSMLGAEGLSGGQAIELDLYTKDKSVVRIEQVESVYLQK 185
ATATK GVSS V ++ ELA+ +GAEGL GQ + D+ ++ S V +E +E ++L K
Sbjct: 193 ATATK-GVSSEKIVRVIGELAKC-IGAEGLVAGQVV--DICSEGISDVGLEHLEFIHLHK 248
Query: 186 TSIGFXXXXXXXXXXXXXXXXXXNRLRKYCKYTGLVYQIKDDILD 320
T+ +LRK+ + GL++Q+ DDILD
Sbjct: 249 TAALLEASVVLGAVLGGGTEEEVAKLRKFARNIGLLFQVVDDILD 293
>dbj|BAI47571.1| geranylgeranyl pyrophosphate synthase [Ipomoea sp. Kenyan]
Length = 373
Score = 57.0 bits (136), Expect = 3e-06
Identities = 39/105 (37%), Positives = 58/105 (55%)
Frame = +3
Query: 6 ATATKLGVSSTNTVIMLSELARSMLGAEGLSGGQAIELDLYTKDKSVVRIEQVESVYLQK 185
ATATK G SS V ++ ELA+S +GAEGL GQ + D+ ++ S V +E +E ++L K
Sbjct: 203 ATATK-GASSEKIVRVVGELAKS-IGAEGLVAGQVV--DICSEGISNVGLEHLEFIHLHK 258
Query: 186 TSIGFXXXXXXXXXXXXXXXXXXNRLRKYCKYTGLVYQIKDDILD 320
T+ +LRK+ + GL++Q+ DDILD
Sbjct: 259 TAALLEGSVVLGAILGGGTEEEIAKLRKFARNIGLLFQVVDDILD 303
>ref|XP_002884145.1| geranylgeranyl diphosphate synthase [Arabidopsis lyrata subsp.
lyrata] gi|297329985|gb|EFH60404.1| geranylgeranyl
diphosphate synthase [Arabidopsis lyrata subsp. lyrata]
Length = 329
Score = 56.6 bits (135), Expect = 3e-06
Identities = 34/105 (32%), Positives = 55/105 (52%)
Frame = +3
Query: 6 ATATKLGVSSTNTVIMLSELARSMLGAEGLSGGQAIELDLYTKDKSVVRIEQVESVYLQK 185
AT T +S V + ELA++ +G+EGL GQ ++L D++ V +E +E ++L K
Sbjct: 156 ATETPEIISPARVVRAIGELAKA-IGSEGLVAGQVVDLTSEGMDQNDVGLELLEFIHLHK 214
Query: 186 TSIGFXXXXXXXXXXXXXXXXXXNRLRKYCKYTGLVYQIKDDILD 320
T++ RLRK+ + GL++Q+ DDILD
Sbjct: 215 TAVLLEAATVLGAIFGGGTNEEIERLRKFARCIGLLFQVVDDILD 259
>ref|XP_004300598.1| PREDICTED: geranylgeranyl pyrophosphate synthase,
chloroplastic-like [Fragaria vesca subsp. vesca]
Length = 360
Score = 56.2 bits (134), Expect = 4e-06
Identities = 33/100 (33%), Positives = 55/100 (55%)
Frame = +3
Query: 21 LGVSSTNTVIMLSELARSMLGAEGLSGGQAIELDLYTKDKSVVRIEQVESVYLQKTSIGF 200
+GV + V + ELARS +G+EGL GQ + D++++ S V +EQ+E +++ KT+
Sbjct: 194 VGVEPSRIVRAVEELARS-IGSEGLVAGQVV--DIHSEGLSDVGLEQLEYIHIHKTAALL 250
Query: 201 XXXXXXXXXXXXXXXXXXNRLRKYCKYTGLVYQIKDDILD 320
+LR + +Y GL++Q+ DDILD
Sbjct: 251 ECAVVLGSILGGGSDTEIEKLRTFARYIGLLFQVVDDILD 290
>gb|AAV74397.1| geranylgeranyl diphosphate synthase [Adonis aestivalis var.
palaestina]
Length = 359
Score = 56.2 bits (134), Expect = 4e-06
Identities = 32/99 (32%), Positives = 54/99 (54%)
Frame = +3
Query: 24 GVSSTNTVIMLSELARSMLGAEGLSGGQAIELDLYTKDKSVVRIEQVESVYLQKTSIGFX 203
GVS+ V +++EL + + G++GL GGQ +++ K + + ++E ++L KT+I
Sbjct: 195 GVSADRVVRVIAELGKCV-GSDGLVGGQIVDIASAGKQ---IELSELEYIHLHKTAILLE 250
Query: 204 XXXXXXXXXXXXXXXXXNRLRKYCKYTGLVYQIKDDILD 320
RLRKY +Y GL++Q+ DDILD
Sbjct: 251 ASVVCGAIMGGGMAPDIERLRKYARYIGLLFQVVDDILD 289
>gb|EMJ05575.1| hypothetical protein PRUPE_ppa007368mg [Prunus persica]
Length = 370
Score = 55.5 bits (132), Expect = 7e-06
Identities = 34/100 (34%), Positives = 54/100 (54%)
Frame = +3
Query: 21 LGVSSTNTVIMLSELARSMLGAEGLSGGQAIELDLYTKDKSVVRIEQVESVYLQKTSIGF 200
+GVS + + ELA+S +GAEGL GQ + DL ++ + V +EQ+E ++L KT+
Sbjct: 204 VGVSPERIIRAVEELAKS-IGAEGLVAGQVV--DLNSEGLADVGLEQLEYIHLHKTAALL 260
Query: 201 XXXXXXXXXXXXXXXXXXNRLRKYCKYTGLVYQIKDDILD 320
+LR + +Y GL++Q+ DDILD
Sbjct: 261 ECSVVLGSILGGGSDSETEKLRTFARYIGLLFQVVDDILD 300
>ref|XP_003611924.1| Geranylgeranyl pyrophosphate synthase [Medicago truncatula]
gi|355513259|gb|AES94882.1| Geranylgeranyl pyrophosphate
synthase [Medicago truncatula]
Length = 371
Score = 55.5 bits (132), Expect = 7e-06
Identities = 33/100 (33%), Positives = 56/100 (56%)
Frame = +3
Query: 21 LGVSSTNTVIMLSELARSMLGAEGLSGGQAIELDLYTKDKSVVRIEQVESVYLQKTSIGF 200
+GV V ++ELA+++ G EGL GQ ++L+ ++ KS V +E +E ++L+KT+
Sbjct: 205 IGVPPERIVRAIAELAKAV-GKEGLVAGQIVDLE--SEGKSNVGLETLEFIHLRKTAALL 261
Query: 201 XXXXXXXXXXXXXXXXXXNRLRKYCKYTGLVYQIKDDILD 320
+LRK+ +Y GL++Q+ DDILD
Sbjct: 262 EAAVVMGAIVGGGTEDEIEKLRKFARYIGLLFQVVDDILD 301
>gb|ACO59905.1| geranylgeranyl pyrophosphate synthase [Elaeagnus umbellata]
Length = 365
Score = 55.5 bits (132), Expect = 7e-06
Identities = 33/100 (33%), Positives = 55/100 (55%)
Frame = +3
Query: 21 LGVSSTNTVIMLSELARSMLGAEGLSGGQAIELDLYTKDKSVVRIEQVESVYLQKTSIGF 200
+GVS+ V + ELA+S +G+EGL GQ + D+ ++ S V +EQ+E +++ KT+
Sbjct: 199 VGVSTARIVRSIGELAKS-IGSEGLVAGQVV--DICSEGLSDVGLEQLEFIHVHKTAALL 255
Query: 201 XXXXXXXXXXXXXXXXXXNRLRKYCKYTGLVYQIKDDILD 320
+LR + +Y GL++Q+ DDILD
Sbjct: 256 EASVVLGAILGGGSDIEIEKLRMFARYIGLLFQVVDDILD 295
>gb|AGN48013.1| geranylgeranyl pyrophosphate synthase [Cucumis melo]
Length = 363
Score = 55.1 bits (131), Expect = 1e-05
Identities = 33/100 (33%), Positives = 53/100 (53%)
Frame = +3
Query: 21 LGVSSTNTVIMLSELARSMLGAEGLSGGQAIELDLYTKDKSVVRIEQVESVYLQKTSIGF 200
+GVS V + ELA+S +GAEGL GQ + D+ ++ + +EQ+E ++L KT+
Sbjct: 197 IGVSPPRIVRAIGELAKS-IGAEGLVAGQVV--DINSEGAADAGLEQLEFIHLHKTAALL 253
Query: 201 XXXXXXXXXXXXXXXXXXNRLRKYCKYTGLVYQIKDDILD 320
+LR + +Y GL++Q+ DDILD
Sbjct: 254 EAAVVLGAILGGGSNEDVEKLRNFARYIGLLFQVVDDILD 293
>ref|XP_006282650.1| hypothetical protein CARUB_v10005063mg [Capsella rubella]
gi|482551355|gb|EOA15548.1| hypothetical protein
CARUB_v10005063mg [Capsella rubella]
Length = 375
Score = 55.1 bits (131), Expect = 1e-05
Identities = 34/105 (32%), Positives = 53/105 (50%)
Frame = +3
Query: 6 ATATKLGVSSTNTVIMLSELARSMLGAEGLSGGQAIELDLYTKDKSVVRIEQVESVYLQK 185
A+AT VS V + ELA++ +G EGL GQ +++ D + V +E +E ++L K
Sbjct: 202 ASATSSEVSPERVVRAVGELAKA-IGTEGLVAGQVVDISSEGLDLNDVGLEHLEYIHLHK 260
Query: 186 TSIGFXXXXXXXXXXXXXXXXXXNRLRKYCKYTGLVYQIKDDILD 320
T+ RLRK+ + GL++Q+ DDILD
Sbjct: 261 TAALLEASAVLGAIVGGGSDDEIERLRKFARCIGLLFQVVDDILD 305
>ref|XP_004148442.1| PREDICTED: geranylgeranyl pyrophosphate synthase,
chloroplastic-like [Cucumis sativus]
gi|449514740|ref|XP_004164466.1| PREDICTED:
geranylgeranyl pyrophosphate synthase,
chloroplastic-like [Cucumis sativus]
Length = 363
Score = 55.1 bits (131), Expect = 1e-05
Identities = 33/100 (33%), Positives = 53/100 (53%)
Frame = +3
Query: 21 LGVSSTNTVIMLSELARSMLGAEGLSGGQAIELDLYTKDKSVVRIEQVESVYLQKTSIGF 200
+GVS V + ELA+S +GAEGL GQ + D+ ++ + +EQ+E ++L KT+
Sbjct: 197 IGVSPPRIVRAIGELAKS-IGAEGLVAGQVV--DINSEGAADAGLEQLEYIHLHKTAALL 253
Query: 201 XXXXXXXXXXXXXXXXXXNRLRKYCKYTGLVYQIKDDILD 320
+LR + +Y GL++Q+ DDILD
Sbjct: 254 EAAVVLGAILGGGSNEDVEKLRNFARYIGLLFQVVDDILD 293