BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus22_contig00035022
         (500 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAC63844.1| putative non-LTR retroelement reverse transcripta...    96   6e-25
ref|XP_006490008.1| PREDICTED: uncharacterized protein LOC102624...    99   8e-24
gb|AAD37021.1| putative non-LTR retrolelement reverse transcript...    99   1e-23
emb|CAB10337.1| reverse transcriptase like protein [Arabidopsis ...    93   2e-22
gb|AAB48350.1| reverse transcriptase, partial [Arabidopsis thali...    89   2e-20
pir||S65815 RNA-directed DNA polymerase (EC 2.7.7.49) (clone NIN...    89   2e-20
emb|CCA66009.1| hypothetical protein [Beta vulgaris subsp. vulga...    87   3e-20
gb|ABD28627.2| RNA-directed DNA polymerase (Reverse transcriptas...    87   2e-19
gb|AAC33961.1| contains similarity to reverse trancriptase (Pfam...    85   3e-19
emb|CAB40051.1| putative protein [Arabidopsis thaliana] gi|72677...    85   3e-19
gb|AAC26674.1| putative non-LTR retroelement reverse transcripta...    78   5e-19
gb|EOY08834.1| Uncharacterized protein TCM_024073 [Theobroma cacao]    80   5e-19
gb|EMJ04543.1| hypothetical protein PRUPE_ppa020282mg [Prunus pe...    89   7e-19
ref|XP_004301927.1| PREDICTED: putative ribonuclease H protein A...    83   1e-18
gb|AAG51783.1|AC079679_3 reverse transcriptase, putative; 16838-...    86   1e-18
gb|EMJ28511.1| hypothetical protein PRUPE_ppa016553mg [Prunus pe...    85   3e-18
emb|CAB75484.1| putative protein [Arabidopsis thaliana]                87   4e-18
gb|AAB82639.1| putative non-LTR retroelement reverse transcripta...    79   6e-18
ref|XP_004298219.1| PREDICTED: uncharacterized protein LOC101304...    80   7e-18
ref|XP_006491472.1| PREDICTED: uncharacterized protein LOC102626...    84   7e-18

>gb|AAC63844.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 1231

 Score = 96.3 bits (238), Expect(2) = 6e-25
 Identities = 52/116 (44%), Positives = 69/116 (59%)
 Frame = -3

Query: 486 PAFHQKNCAIVGESVTRFVKMAFARGKFEASINSSLISLIPKEKNPTGMTQFHPIALCNV 307
           P F+Q+    VG SVTRFV   F  G   AS N +L+ LI K   P  + QF P++LCNV
Sbjct: 317 PVFYQQCWETVGPSVTRFVLEFFETGVLPASTNDALLVLIAKVAKPERIQQFRPVSLCNV 376

Query: 306 LAKTVTKVITN*LTGVMATLKSENQRSFIPSKQVADNIISAQELMHTIRCKKSRKG 139
           L K +TK++   L  V++ L    Q SFIP +   DNI+  QE +H++R KK RKG
Sbjct: 377 LFKIITKMMVTRLKNVISKLIGPAQASFIPGRLSIDNIVLVQEAVHSMRRKKGRKG 432



 Score = 43.5 bits (101), Expect(2) = 6e-25
 Identities = 20/45 (44%), Positives = 26/45 (57%)
 Frame = -2

Query: 136 LEKAYDRTYCKFLERVLRVEGIEEHFIKLIAFGITSATLLVLWNG 2
           LEKAYDR    FL+  L   G+ E +   I  G+T  ++ VLWNG
Sbjct: 440 LEKAYDRVRWDFLQETLEAAGLSEGWTSRIMAGVTDPSMSVLWNG 484


>ref|XP_006490008.1| PREDICTED: uncharacterized protein LOC102624085 [Citrus sinensis]
          Length = 1635

 Score = 98.6 bits (244), Expect(2) = 8e-24
 Identities = 47/114 (41%), Positives = 72/114 (63%)
 Frame = -3

Query: 480  FHQKNCAIVGESVTRFVKMAFARGKFEASINSSLISLIPKEKNPTGMTQFHPIALCNVLA 301
            F+Q    IVGES  + +K  F      A +N +++ LIPK + PT  + + PI+LC V+ 
Sbjct: 952  FYQSQWHIVGESFCKAIKEVFQTQCLPAEVNRTVLVLIPKIEQPTSFSMYRPISLCTVMY 1011

Query: 300  KTVTKVITN*LTGVMATLKSENQRSFIPSKQVADNIISAQELMHTIRCKKSRKG 139
            KT+TK+I N L  ++  L   +Q SF+P + + +NII AQE++H++R KK RKG
Sbjct: 1012 KTITKIIANRLQELLPELIGPHQTSFVPGRHITENIIVAQEIIHSMRRKKGRKG 1065



 Score = 37.4 bits (85), Expect(2) = 8e-24
 Identities = 20/45 (44%), Positives = 26/45 (57%)
 Frame = -2

Query: 136  LEKAYDRTYCKFLERVLRVEGIEEHFIKLIAFGITSATLLVLWNG 2
            L KAYDR    F++  L+   +    I LI   IT+AT+ VLWNG
Sbjct: 1073 LGKAYDRLSWTFIQETLQELNLPTMLINLIMECITTATMNVLWNG 1117


>gb|AAD37021.1| putative non-LTR retrolelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 732

 Score = 99.0 bits (245), Expect(2) = 1e-23
 Identities = 54/116 (46%), Positives = 71/116 (61%)
 Frame = -3

Query: 486 PAFHQKNCAIVGESVTRFVKMAFARGKFEASINSSLISLIPKEKNPTGMTQFHPIALCNV 307
           P F+Q    IVG+SV+RFV   FA GK     N +++ LI K   P  +TQF PI+LCNV
Sbjct: 14  PVFYQDCWDIVGDSVSRFVLDFFASGKLPEGTNDAIVVLIAKVLKPERITQFRPISLCNV 73

Query: 306 LAKTVTKVITN*LTGVMATLKSENQRSFIPSKQVADNIISAQELMHTIRCKKSRKG 139
           L KT+TK +   L  V++ L    Q SFI  +  ADNI+  QE +H++R KK RKG
Sbjct: 74  LFKTITKTLVMRLKRVISKLIRPAQASFISGRLAADNIVIMQEAVHSMRRKKGRKG 129



 Score = 36.6 bits (83), Expect(2) = 1e-23
 Identities = 19/44 (43%), Positives = 26/44 (59%)
 Frame = -2

Query: 136 LEKAYDRTYCKFLERVLRVEGIEEHFIKLIAFGITSATLLVLWN 5
           LEKAYDR   +FLE  LR   + E +I  I   +T  ++ +LWN
Sbjct: 137 LEKAYDRIRWEFLEDTLRAVRLPEKWIVWIMQCVTEPSMSLLWN 180


>emb|CAB10337.1| reverse transcriptase like protein [Arabidopsis thaliana]
           gi|7268307|emb|CAB78601.1| reverse transcriptase like
           protein [Arabidopsis thaliana]
          Length = 929

 Score = 93.2 bits (230), Expect(2) = 2e-22
 Identities = 50/116 (43%), Positives = 69/116 (59%)
 Frame = -3

Query: 486 PAFHQKNCAIVGESVTRFVKMAFARGKFEASINSSLISLIPKEKNPTGMTQFHPIALCNV 307
           P F+Q+    VGESV++FV   F  G    S N  L+ L+ K   P  +TQF P++LCNV
Sbjct: 269 PVFYQQCWETVGESVSKFVMEFFESGVLPKSTNDVLLVLLAKVAKPERITQFRPVSLCNV 328

Query: 306 LAKTVTKVITN*LTGVMATLKSENQRSFIPSKQVADNIISAQELMHTIRCKKSRKG 139
           L K +TK++   L  V++ L    Q SFIP +   DNI+  QE +H++R KK RKG
Sbjct: 329 LFKIITKMMVIRLKNVISKLIGPAQASFIPGRLSFDNIVVVQEAVHSMRRKKGRKG 384



 Score = 38.1 bits (87), Expect(2) = 2e-22
 Identities = 19/45 (42%), Positives = 24/45 (53%)
 Frame = -2

Query: 136 LEKAYDRTYCKFLERVLRVEGIEEHFIKLIAFGITSATLLVLWNG 2
           LEKAYDR    FL   L   G+ E +IK I   +    + +LWNG
Sbjct: 392 LEKAYDRIRWDFLAETLEAAGLSEGWIKRIMECVAGPEMSLLWNG 436


>gb|AAB48350.1| reverse transcriptase, partial [Arabidopsis thaliana]
          Length = 198

 Score = 89.4 bits (220), Expect(2) = 2e-20
 Identities = 49/114 (42%), Positives = 64/114 (56%)
 Frame = -3

Query: 480 FHQKNCAIVGESVTRFVKMAFARGKFEASINSSLISLIPKEKNPTGMTQFHPIALCNVLA 301
           F+Q +  +VG SVT+FV   F  G      N  L++LIPK   P  +TQF  I+LCNVL 
Sbjct: 11  FYQDSWDVVGTSVTKFVLDFFRDGVLPEKTNDVLVALIPKVLKPEKITQFRAISLCNVLF 70

Query: 300 KTVTKVITN*LTGVMATLKSENQRSFIPSKQVADNIISAQELMHTIRCKKSRKG 139
           K +TK +   + GVM  L    Q SFIP +   DNI+  QE +H +R KK   G
Sbjct: 71  KAITKTMVGRMKGVMQKLIGPAQSSFIPGRLSTDNIVVVQEAVHPMRKKKGVMG 124



 Score = 35.4 bits (80), Expect(2) = 2e-20
 Identities = 18/45 (40%), Positives = 23/45 (51%)
 Frame = -2

Query: 136 LEKAYDRTYCKFLERVLRVEGIEEHFIKLIAFGITSATLLVLWNG 2
           LEKAYDR    FLE  L   G    ++  I   +   ++ VLWNG
Sbjct: 132 LEKAYDRIRWDFLEDTLVAAGFSAQWVTWIMQCVAGPSMSVLWNG 176


>pir||S65815 RNA-directed DNA polymerase (EC 2.7.7.49) (clone NING13) -
           Arabidopsis thaliana retrotransposon Ta28 (fragment)
          Length = 183

 Score = 89.4 bits (220), Expect(2) = 2e-20
 Identities = 49/114 (42%), Positives = 64/114 (56%)
 Frame = -3

Query: 480 FHQKNCAIVGESVTRFVKMAFARGKFEASINSSLISLIPKEKNPTGMTQFHPIALCNVLA 301
           F+Q +  +VG SVT+FV   F  G      N  L++LIPK   P  +TQF  I+LCNVL 
Sbjct: 5   FYQDSWDVVGTSVTKFVLDFFRDGVLPEKTNDVLVALIPKVLKPEKITQFRAISLCNVLF 64

Query: 300 KTVTKVITN*LTGVMATLKSENQRSFIPSKQVADNIISAQELMHTIRCKKSRKG 139
           K +TK +   + GVM  L    Q SFIP +   DNI+  QE +H +R KK   G
Sbjct: 65  KAITKTMVGRMKGVMQKLIGPAQSSFIPGRLSTDNIVVVQEAVHPMRKKKGVMG 118



 Score = 35.4 bits (80), Expect(2) = 2e-20
 Identities = 18/45 (40%), Positives = 23/45 (51%)
 Frame = -2

Query: 136 LEKAYDRTYCKFLERVLRVEGIEEHFIKLIAFGITSATLLVLWNG 2
           LEKAYDR    FLE  L   G    ++  I   +   ++ VLWNG
Sbjct: 126 LEKAYDRIRWDFLEDTLVAAGFSAQWVTWIMQCVAGPSMSVLWNG 170


>emb|CCA66009.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1378

 Score = 86.7 bits (213), Expect(2) = 3e-20
 Identities = 45/116 (38%), Positives = 66/116 (56%)
 Frame = -3

Query: 486 PAFHQKNCAIVGESVTRFVKMAFARGKFEASINSSLISLIPKEKNPTGMTQFHPIALCNV 307
           P F+Q+   +V  +V   V    +   F    N + I LIPK   P     F PI LCN+
Sbjct: 460 PLFYQRFWDLVKPNVMHLVSEILSGRDFPEGFNDTFIVLIPKMDIPQLAKHFRPIGLCNI 519

Query: 306 LAKTVTKVITN*LTGVMATLKSENQRSFIPSKQVADNIISAQELMHTIRCKKSRKG 139
           + K VTKVI N L  ++ +L S  Q SF+P++Q+ DN+I  QE+ H++R K+ +KG
Sbjct: 520 VYKIVTKVIINRLKPILPSLISPTQCSFVPNRQITDNVIIVQEMFHSMRNKQGKKG 575



 Score = 37.4 bits (85), Expect(2) = 3e-20
 Identities = 17/44 (38%), Positives = 25/44 (56%)
 Frame = -2

Query: 133 EKAYDRTYCKFLERVLRVEGIEEHFIKLIAFGITSATLLVLWNG 2
           EKAYDR    F+   L    I +H + ++   ++SA L +LWNG
Sbjct: 584 EKAYDRLRWTFIRESLMELRIPQHLVDIVMNCVSSANLQILWNG 627


>gb|ABD28627.2| RNA-directed DNA polymerase (Reverse transcriptase); Ribonuclease H
           [Medicago truncatula]
          Length = 1296

 Score = 86.7 bits (213), Expect(2) = 2e-19
 Identities = 45/114 (39%), Positives = 68/114 (59%)
 Frame = -3

Query: 480 FHQKNCAIVGESVTRFVKMAFARGKFEASINSSLISLIPKEKNPTGMTQFHPIALCNVLA 301
           F ++   IVG+ V   V+ AF  G F+ +I+++LI+LIPK  +P     F PI+LCN L 
Sbjct: 458 FFKQYWHIVGDDVFHLVRSAFLTGHFDPAISNTLIALIPKIDSPNTYKDFRPISLCNTLY 517

Query: 300 KTVTKVITN*LTGVMATLKSENQRSFIPSKQVADNIISAQELMHTIRCKKSRKG 139
           K +TKV+ + L   +  L    Q SF+P +  ADN I  QE++H ++  K +KG
Sbjct: 518 KIITKVLVHRLRPFLNNLIGPYQSSFLPGRGTADNSIILQEILHFMKRSKRKKG 571



 Score = 34.7 bits (78), Expect(2) = 2e-19
 Identities = 18/45 (40%), Positives = 24/45 (53%)
 Frame = -2

Query: 136 LEKAYDRTYCKFLERVLRVEGIEEHFIKLIAFGITSATLLVLWNG 2
           LEKA+D     FL   L   G  +  +KLI   ++SA   +LWNG
Sbjct: 579 LEKAFDNVNWDFLNSCLLDFGFPDIIVKLIMHCVSSANYSLLWNG 623


>gb|AAC33961.1| contains similarity to reverse trancriptase (Pfam: rvt.hmm, score:
            42.57) [Arabidopsis thaliana]
          Length = 1662

 Score = 84.7 bits (208), Expect(2) = 3e-19
 Identities = 42/110 (38%), Positives = 68/110 (61%)
 Frame = -3

Query: 480  FHQKNCAIVGESVTRFVKMAFARGKFEASINSSLISLIPKEKNPTGMTQFHPIALCNVLA 301
            F++    IVG  V + VK+ F     + SIN + I +IPK  NP  ++ + PIALCNVL 
Sbjct: 837  FYKSCWEIVGPDVIKEVKIFFRTSYMKQSINHTNICMIPKITNPETLSDYRPIALCNVLY 896

Query: 300  KTVTKVITN*LTGVMATLKSENQRSFIPSKQVADNIISAQELMHTIRCKK 151
            K ++K +   L G +  + S++Q +FIP + V DN++ A E+MH+++ +K
Sbjct: 897  KIISKCLVERLKGHLDAIVSDSQAAFIPGRLVNDNVMIAHEMMHSLKTRK 946



 Score = 35.8 bits (81), Expect(2) = 3e-19
 Identities = 20/48 (41%), Positives = 25/48 (52%)
 Frame = -2

Query: 145  KRYLEKAYDRTYCKFLERVLRVEGIEEHFIKLIAFGITSATLLVLWNG 2
            K  + KAYDR    FLE  +R+ G  E +IK I   + S    VL NG
Sbjct: 956  KTDVSKAYDRVEWNFLETTMRLFGFSETWIKWIMGAVKSVNYSVLVNG 1003


>emb|CAB40051.1| putative protein [Arabidopsis thaliana] gi|7267781|emb|CAB81184.1|
            putative protein [Arabidopsis thaliana]
          Length = 1294

 Score = 84.7 bits (208), Expect(2) = 3e-19
 Identities = 42/110 (38%), Positives = 68/110 (61%)
 Frame = -3

Query: 480  FHQKNCAIVGESVTRFVKMAFARGKFEASINSSLISLIPKEKNPTGMTQFHPIALCNVLA 301
            F++    IVG  V + VK+ F     + SIN + I +IPK  NP  ++ + PIALCNVL 
Sbjct: 817  FYKSCWEIVGPDVIKEVKIFFRTSYMKQSINHTNICMIPKITNPETLSDYRPIALCNVLY 876

Query: 300  KTVTKVITN*LTGVMATLKSENQRSFIPSKQVADNIISAQELMHTIRCKK 151
            K ++K +   L G +  + S++Q +FIP + V DN++ A E+MH+++ +K
Sbjct: 877  KIISKCLVERLKGHLDAIVSDSQAAFIPGRLVNDNVMIAHEMMHSLKTRK 926



 Score = 35.8 bits (81), Expect(2) = 3e-19
 Identities = 20/48 (41%), Positives = 25/48 (52%)
 Frame = -2

Query: 145  KRYLEKAYDRTYCKFLERVLRVEGIEEHFIKLIAFGITSATLLVLWNG 2
            K  + KAYDR    FLE  +R+ G  E +IK I   + S    VL NG
Sbjct: 936  KTDVSKAYDRVEWNFLETTMRLFGFSETWIKWIMGAVKSVNYSVLVNG 983


>gb|AAC26674.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 970

 Score = 78.2 bits (191), Expect(2) = 5e-19
 Identities = 43/96 (44%), Positives = 59/96 (61%), Gaps = 5/96 (5%)
 Frame = -3

Query: 411 GKFEAS-----INSSLISLIPKEKNPTGMTQFHPIALCNVLAKTVTKVITN*LTGVMATL 247
           G+F+AS      N +L+ LI K   P  +TQF P++LCNVL K +TK+I N L  V+  L
Sbjct: 187 GRFKASGPYAATNDALLVLIAKVAKPERITQFRPMSLCNVLFKIITKMIVNRLKKVILKL 246

Query: 246 KSENQRSFIPSKQVADNIISAQELMHTIRCKKSRKG 139
               Q +FIP +   DNI+  QE +H++R KK RKG
Sbjct: 247 IGPAQANFIPGRLSIDNIVLVQEAVHSMRRKKGRKG 282



 Score = 41.6 bits (96), Expect(2) = 5e-19
 Identities = 20/45 (44%), Positives = 26/45 (57%)
 Frame = -2

Query: 136 LEKAYDRTYCKFLERVLRVEGIEEHFIKLIAFGITSATLLVLWNG 2
           LEKAYDR    FL+  L   G+ E +   I  G+T  ++ VLWNG
Sbjct: 290 LEKAYDRIRWNFLQETLVATGLSEVWTHRIMAGVTDPSMSVLWNG 334


>gb|EOY08834.1| Uncharacterized protein TCM_024073 [Theobroma cacao]
          Length = 660

 Score = 79.7 bits (195), Expect(2) = 5e-19
 Identities = 39/95 (41%), Positives = 61/95 (64%)
 Frame = -3

Query: 423 AFARGKFEASINSSLISLIPKEKNPTGMTQFHPIALCNVLAKTVTKVITN*LTGVMATLK 244
           A+ RG F  S+N +LI+LIPK +    ++QF PI+LC+V  K ++K++ + L  ++  L+
Sbjct: 395 AYLRGSFPPSLNHTLITLIPKVERLENVSQFCPISLCSVRMKLLSKILVDRLRPILTELR 454

Query: 243 SENQRSFIPSKQVADNIISAQELMHTIRCKKSRKG 139
              Q SFIP  Q +DNII  Q+ +HT+   K +KG
Sbjct: 455 RNTQSSFIPRLQASDNIIVVQKAIHTMWIMKRKKG 489



 Score = 40.0 bits (92), Expect(2) = 5e-19
 Identities = 21/45 (46%), Positives = 27/45 (60%)
 Frame = -2

Query: 136 LEKAYDRTYCKFLERVLRVEGIEEHFIKLIAFGITSATLLVLWNG 2
           LEKAYDR    FL+ VL   G+  ++I LI   + + T  VLWNG
Sbjct: 497 LEKAYDRVKWSFLQEVLIEIGLPLNWISLIMNIVQNPTFFVLWNG 541


>gb|EMJ04543.1| hypothetical protein PRUPE_ppa020282mg [Prunus persica]
          Length = 1496

 Score = 88.6 bits (218), Expect(2) = 7e-19
 Identities = 50/117 (42%), Positives = 68/117 (58%), Gaps = 1/117 (0%)
 Frame = -3

Query: 486  PAFHQKNCAIVGESVTRFVKMAFARGKFEASINSSLISLIPKEKNPTGMTQFHPIALCNV 307
            P F+QK   IVGE V   V   F  GK    IN + ++LIPK   P  M Q  PI+LCNV
Sbjct: 816  PFFYQKYWPIVGEDVVAAVLHFFKTGKLLKRINFTHVALIPKVHEPKNMMQLRPISLCNV 875

Query: 306  LAKTVTKVITN*LTGVMATLKSENQRSFIPSKQVADNIISAQELMHTIRCK-KSRKG 139
            L K   KV+T  L  ++ TL S+ Q +F+P + ++DN I A EL+H +  K + R+G
Sbjct: 876  LYKIGAKVLTTRLKAILPTLISDTQSAFVPGRAISDNSIVAFELLHMMHKKNQGRQG 932



 Score = 30.8 bits (68), Expect(2) = 7e-19
 Identities = 15/45 (33%), Positives = 25/45 (55%)
 Frame = -2

Query: 136  LEKAYDRTYCKFLERVLRVEGIEEHFIKLIAFGITSATLLVLWNG 2
            + KAYDR    FLE +++  G    +I+LI   +T+ +   + NG
Sbjct: 940  MSKAYDRVEWSFLEALMKGMGFAPRWIQLIMECVTTVSYSFMLNG 984


>ref|XP_004301927.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
           vesca subsp. vesca]
          Length = 968

 Score = 83.2 bits (204), Expect(2) = 1e-18
 Identities = 42/111 (37%), Positives = 69/111 (62%)
 Frame = -3

Query: 480 FHQKNCAIVGESVTRFVKMAFARGKFEASINSSLISLIPKEKNPTGMTQFHPIALCNVLA 301
           F Q+  ++VG+ V+         G     IN +LI+LIPK +NP  +  F PI+LCNV+ 
Sbjct: 84  FFQEYWSVVGDDVSDLCLRVLNEGAELTGINHTLIALIPKVENPQQVPDFRPISLCNVIY 143

Query: 300 KTVTKVITN*LTGVMATLKSENQRSFIPSKQVADNIISAQELMHTIRCKKS 148
           K ++K I N L GV+  + S+ Q +F P + + DN+I+A EL+H+I+ +++
Sbjct: 144 KLISKAIVNRLKGVLPDVISQFQSAFGPGRCIHDNVITAFELIHSIKTRQT 194



 Score = 35.4 bits (80), Expect(2) = 1e-18
 Identities = 18/45 (40%), Positives = 25/45 (55%)
 Frame = -2

Query: 136 LEKAYDRTYCKFLERVLRVEGIEEHFIKLIAFGITSATLLVLWNG 2
           + KAYD     FL+ VL   G +E  ++LI   + S +  VLWNG
Sbjct: 206 ISKAYDWVEWVFLQGVLTKFGFDEKLVELIMRCVRSVSFSVLWNG 250


>gb|AAG51783.1|AC079679_3 reverse transcriptase, putative; 16838-20266 [Arabidopsis thaliana]
          Length = 1142

 Score = 85.5 bits (210), Expect(2) = 1e-18
 Identities = 43/113 (38%), Positives = 66/113 (58%)
 Frame = -3

Query: 480 FHQKNCAIVGESVTRFVKMAFARGKFEASINSSLISLIPKEKNPTGMTQFHPIALCNVLA 301
           F QK+ AI+   +   V      G F+  +N++ I LIPK + PT MT+  PI+LCNV  
Sbjct: 239 FFQKSWAIIKSDLLSLVNSFLQEGVFDKRLNTTNICLIPKTERPTRMTELRPISLCNVGY 298

Query: 300 KTVTKVITN*LTGVMATLKSENQRSFIPSKQVADNIISAQELMHTIRCKKSRK 142
           K ++K++   L  V+  L SE Q +F+  + ++DNI+ AQE+ H +R   S K
Sbjct: 299 KVISKILCQRLKTVLPNLISETQSAFVDGRLISDNILIAQEMFHGLRTNSSCK 351



 Score = 32.7 bits (73), Expect(2) = 1e-18
 Identities = 19/48 (39%), Positives = 26/48 (54%)
 Frame = -2

Query: 145 KRYLEKAYDRTYCKFLERVLRVEGIEEHFIKLIAFGITSATLLVLWNG 2
           K  + KAYD+    F+E +LR  G  E +I  I + IT+    VL NG
Sbjct: 358 KTDMSKAYDQVEWNFIEALLRKMGFCEKWISWIMWCITTVQYKVLING 405


>gb|EMJ28511.1| hypothetical protein PRUPE_ppa016553mg [Prunus persica]
          Length = 992

 Score = 85.1 bits (209), Expect(2) = 3e-18
 Identities = 46/115 (40%), Positives = 67/115 (58%)
 Frame = -3

Query: 486 PAFHQKNCAIVGESVTRFVKMAFARGKFEASINSSLISLIPKEKNPTGMTQFHPIALCNV 307
           P F QK   IVG  VTR +K     G+    IN + + LIPK K+P  M+Q  PI+LCNV
Sbjct: 98  PIFFQKYWHIVGSDVTRAIKDFLTSGRLLQKINFTHVVLIPKVKHPKDMSQLRPISLCNV 157

Query: 306 LAKTVTKVITN*LTGVMATLKSENQRSFIPSKQVADNIISAQELMHTIRCKKSRK 142
           L K  TKV+ N L  ++  + S +Q + I  + ++DN I A E++H +R ++  K
Sbjct: 158 LFKIATKVLANRLKLILDKIISPSQSALISGRLISDNTILAAEIIHYLRRRRRGK 212



 Score = 32.3 bits (72), Expect(2) = 3e-18
 Identities = 17/48 (35%), Positives = 27/48 (56%)
 Frame = -2

Query: 145 KRYLEKAYDRTYCKFLERVLRVEGIEEHFIKLIAFGITSATLLVLWNG 2
           K  + KAYDR    FLE ++R  G  E +I+L+   I++ +   + NG
Sbjct: 219 KMDMSKAYDRIEWSFLEAIMRKLGFAEQWIQLMLTCISTVSYSFVING 266


>emb|CAB75484.1| putative protein [Arabidopsis thaliana]
          Length = 851

 Score = 86.7 bits (213), Expect(2) = 4e-18
 Identities = 41/116 (35%), Positives = 73/116 (62%)
 Frame = -3

Query: 480 FHQKNCAIVGESVTRFVKMAFARGKFEASINSSLISLIPKEKNPTGMTQFHPIALCNVLA 301
           F+++   IVG  V + VK+ F     + S+N + I +IPK +NP  ++ + PIALCNVL 
Sbjct: 76  FYKQCWDIVGNDVIKEVKLFFESSHMKTSVNHTNICMIPKIQNPQTLSDYRPIALCNVLY 135

Query: 300 KTVTKVITN*LTGVMATLKSENQRSFIPSKQVADNIISAQELMHTIRCKKSRKGTW 133
           K ++K + N L   + ++ S++Q +FIP + + DN++ A E+MH+++ +K    T+
Sbjct: 136 KVISKCMVNRLKAHLNSIVSDSQAAFIPGRIINDNVMIAHEIMHSLKVRKRVSKTY 191



 Score = 30.0 bits (66), Expect(2) = 4e-18
 Identities = 18/48 (37%), Positives = 24/48 (50%)
 Frame = -2

Query: 145 KRYLEKAYDRTYCKFLERVLRVEGIEEHFIKLIAFGITSATLLVLWNG 2
           K  + KAYDR    FLE  +R+ G  + +I  I   + S    VL NG
Sbjct: 195 KTDVSKAYDRVEWDFLETTMRLFGFCDKWIGWIMAAVKSVHYSVLING 242


>gb|AAB82639.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 1374

 Score = 79.0 bits (193), Expect(2) = 6e-18
 Identities = 38/105 (36%), Positives = 62/105 (59%)
 Frame = -3

Query: 477 HQKNCAIVGESVTRFVKMAFARGKFEASINSSLISLIPKEKNPTGMTQFHPIALCNVLAK 298
           +Q+    +G+ +T  V+  F  G  E  +N + I LIPK      MT F PI+LCNV+ K
Sbjct: 456 YQQFWETMGDQITEMVQAFFRSGSIEEGMNKTNICLIPKILKAEKMTDFRPISLCNVIYK 515

Query: 297 TVTKVITN*LTGVMATLKSENQRSFIPSKQVADNIISAQELMHTI 163
            + K++ N L  ++ +L SE Q +F+  + ++DNI+ A EL+H +
Sbjct: 516 VIGKLMANRLKKILPSLISETQAAFVKGRLISDNILIAHELLHAL 560



 Score = 37.4 bits (85), Expect(2) = 6e-18
 Identities = 20/48 (41%), Positives = 27/48 (56%)
 Frame = -2

Query: 145 KRYLEKAYDRTYCKFLERVLRVEGIEEHFIKLIAFGITSATLLVLWNG 2
           K  + KAYDR    FLE+ +R  G  +H+I+LI   + S    VL NG
Sbjct: 574 KTDISKAYDRVEWPFLEKAMRGLGFADHWIRLIMECVKSVRYQVLING 621


>ref|XP_004298219.1| PREDICTED: uncharacterized protein LOC101304768 [Fragaria vesca
           subsp. vesca]
          Length = 1687

 Score = 80.1 bits (196), Expect(2) = 7e-18
 Identities = 39/111 (35%), Positives = 68/111 (61%)
 Frame = -3

Query: 480 FHQKNCAIVGESVTRFVKMAFARGKFEASINSSLISLIPKEKNPTGMTQFHPIALCNVLA 301
           F+Q    IVG+ V+         G     +N +L++LIPK +NP G+  F PI+LCNVL 
Sbjct: 459 FYQAYWEIVGDEVSNRCLQVLNEGASVKDLNHTLLALIPKIENPQGVADFRPISLCNVLY 518

Query: 300 KTVTKVITN*LTGVMATLKSENQRSFIPSKQVADNIISAQELMHTIRCKKS 148
           K ++K + N +  ++  + S  Q +F+P + + DN+++A E++H+IR K++
Sbjct: 519 KLISKAMVNRMKVLLPEVISCYQSAFVPGRCIHDNVVTAFEVIHSIRNKQT 569



 Score = 35.8 bits (81), Expect(2) = 7e-18
 Identities = 15/45 (33%), Positives = 25/45 (55%)
 Frame = -2

Query: 136 LEKAYDRTYCKFLERVLRVEGIEEHFIKLIAFGITSATLLVLWNG 2
           + KAYDR    FL  ++   G  E +++L+   + S +  +LWNG
Sbjct: 581 ISKAYDRVEWIFLRNIMLKLGFSERWVELVMKCVESVSFSILWNG 625


>ref|XP_006491472.1| PREDICTED: uncharacterized protein LOC102626455 [Citrus sinensis]
          Length = 1452

 Score = 84.0 bits (206), Expect(2) = 7e-18
 Identities = 44/114 (38%), Positives = 66/114 (57%)
 Frame = -3

Query: 483 AFHQKNCAIVGESVTRFVKMAFARGKFEASINSSLISLIPKEKNPTGMTQFHPIALCNVL 304
           AF QK+  IVGE +T+             S+N + I+LIPK + P  + +F PI+LCNV+
Sbjct: 549 AFFQKHWQIVGEGLTKTCLHILNEQGTLDSLNHTFIALIPKVEKPRKVMEFRPISLCNVV 608

Query: 303 AKTVTKVITN*LTGVMATLKSENQRSFIPSKQVADNIISAQELMHTIRCKKSRK 142
            + V K I N L  ++  + S NQ +FIP++ + DN+I   E +H IR  K R+
Sbjct: 609 YRIVAKAIANRLKPILNHIISPNQSAFIPNRLITDNVIIGYECLHKIRLSKGRR 662



 Score = 32.0 bits (71), Expect(2) = 7e-18
 Identities = 18/45 (40%), Positives = 23/45 (51%)
 Frame = -2

Query: 136 LEKAYDRTYCKFLERVLRVEGIEEHFIKLIAFGITSATLLVLWNG 2
           + KAYDR    FLE+ +   G    +I LI   IT+    VL NG
Sbjct: 672 ISKAYDRVEWNFLEQTMSNLGFSAKWISLIMSCITTTCFSVLING 716