BLASTX nr result
ID: Catharanthus22_contig00034815
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus22_contig00034815
(860 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EOY19200.1| Retrotransposon, unclassified-like protein [Theob... 49 1e-08
ref|XP_006487889.1| PREDICTED: uncharacterized protein LOC102617... 53 8e-08
gb|EOY02239.1| Uncharacterized protein TCM_016763 [Theobroma cacao] 45 3e-07
emb|CAA18234.1| putative protein [Arabidopsis thaliana] gi|72694... 53 3e-07
gb|EOY25454.1| Uncharacterized protein TCM_026877 [Theobroma cacao] 47 4e-07
gb|EOY14356.1| Uncharacterized protein TCM_033752 [Theobroma cacao] 45 1e-06
gb|EOY02242.1| Uncharacterized protein TCM_016767 [Theobroma cacao] 45 1e-06
gb|AAG50806.1|AC079281_8 unknown protein [Arabidopsis thaliana] 50 2e-06
ref|XP_006493121.1| PREDICTED: putative ribonuclease H protein A... 50 2e-06
gb|ABE87589.2| RNA-directed DNA polymerase (Reverse transcriptas... 48 4e-06
ref|XP_006364939.1| PREDICTED: uncharacterized protein LOC102581... 47 5e-06
gb|AAD21699.1| Contains reverse transcriptase domain (rvt) PF|00... 51 5e-06
emb|CAN62411.1| hypothetical protein VITISV_029284 [Vitis vinifera] 51 7e-06
emb|CAN70593.1| hypothetical protein VITISV_026737 [Vitis vinifera] 50 7e-06
ref|XP_006491472.1| PREDICTED: uncharacterized protein LOC102626... 57 9e-06
ref|XP_004233579.1| PREDICTED: uncharacterized protein LOC101260... 57 9e-06
ref|XP_004296004.1| PREDICTED: putative ribonuclease H protein A... 43 9e-06
gb|ABD28670.2| RNA-directed DNA polymerase (Reverse transcriptas... 42 9e-06
emb|CAN77417.1| hypothetical protein VITISV_000477 [Vitis vinifera] 42 9e-06
>gb|EOY19200.1| Retrotransposon, unclassified-like protein [Theobroma cacao]
Length = 1368
Score = 48.5 bits (114), Expect(2) = 1e-08
Identities = 24/48 (50%), Positives = 34/48 (70%), Gaps = 2/48 (4%)
Frame = +2
Query: 575 CLT-CFF-ILVNG*GVGSFPSGLGVKQSDPLSPLLFILVAKVFSRGLN 712
C+T C+F +L+NG G F S G++Q D +SP+LFIL A+ SRG+N
Sbjct: 577 CITNCWFSVLINGHSAGYFKSERGLRQGDSISPMLFILAAEYLSRGIN 624
Score = 38.1 bits (87), Expect(2) = 1e-08
Identities = 14/43 (32%), Positives = 28/43 (65%)
Frame = +1
Query: 463 VKV*EVEPFDQVSWQFLLAVLSAFDFRSHFCELIRNCLLNMFF 591
+K+ ++ +D+++W FL+ VL F F + ++IR C+ N +F
Sbjct: 541 LKLDMMKAYDRLNWDFLILVLERFGFNDMWIDMIRRCITNCWF 583
>ref|XP_006487889.1| PREDICTED: uncharacterized protein LOC102617714 [Citrus sinensis]
Length = 1238
Score = 52.8 bits (125), Expect(2) = 8e-08
Identities = 31/69 (44%), Positives = 40/69 (57%), Gaps = 2/69 (2%)
Frame = +2
Query: 575 CLTC--FFILVNG*GVGSFPSGLGVKQSDPLSPLLFILVAKVFSRGLNSQLQNDTINGFP 748
C+T F +L+NG G G++Q PLSP LF+L A+VFS L QN I+G
Sbjct: 535 CITTPSFSVLINGVPKGQIQPQRGLRQGCPLSPYLFLLCAEVFSNMLIQADQNQIIHGLR 594
Query: 749 FSSSLPQSH 775
F+SSL SH
Sbjct: 595 FNSSLSISH 603
Score = 30.8 bits (68), Expect(2) = 8e-08
Identities = 12/35 (34%), Positives = 18/35 (51%)
Frame = +1
Query: 487 FDQVSWQFLLAVLSAFDFRSHFCELIRNCLLNMFF 591
+D+V W FL + F S++ EL NC+ F
Sbjct: 507 YDRVEWNFLRCAMQKLGFSSNWIELTMNCITTPSF 541
>gb|EOY02239.1| Uncharacterized protein TCM_016763 [Theobroma cacao]
Length = 2127
Score = 45.1 bits (105), Expect(2) = 3e-07
Identities = 22/42 (52%), Positives = 28/42 (66%)
Frame = +2
Query: 587 FFILVNG*GVGSFPSGLGVKQSDPLSPLLFILVAKVFSRGLN 712
F +L+NG G F S G++Q D +SP+LFIL A SRGLN
Sbjct: 1376 FSLLINGSLAGYFKSERGLRQGDSISPMLFILAADYLSRGLN 1417
Score = 36.6 bits (83), Expect(2) = 3e-07
Identities = 12/43 (27%), Positives = 28/43 (65%)
Frame = +1
Query: 463 VKV*EVEPFDQVSWQFLLAVLSAFDFRSHFCELIRNCLLNMFF 591
+K+ + +D+++W FL ++ F F +H+ +I++C+ N +F
Sbjct: 1334 LKLDMAKAYDRLNWDFLYLMMEHFGFNAHWINMIKSCISNCWF 1376
>emb|CAA18234.1| putative protein [Arabidopsis thaliana] gi|7269488|emb|CAB79491.1|
putative protein [Arabidopsis thaliana]
Length = 1141
Score = 53.1 bits (126), Expect(2) = 3e-07
Identities = 29/63 (46%), Positives = 38/63 (60%)
Frame = +2
Query: 587 FFILVNG*GVGSFPSGLGVKQSDPLSPLLFILVAKVFSRGLNSQLQNDTINGFPFSSSLP 766
F + VNG G F S G++Q DPLSP LF+L +VFS+ LNS+ + I P +S L
Sbjct: 610 FTVSVNGCCGGFFKSAKGLRQGDPLSPYLFVLAMEVFSKLLNSRFDSGYIRYHPKASDLS 669
Query: 767 QSH 775
SH
Sbjct: 670 ISH 672
Score = 28.5 bits (62), Expect(2) = 3e-07
Identities = 11/30 (36%), Positives = 16/30 (53%)
Frame = +1
Query: 487 FDQVSWQFLLAVLSAFDFRSHFCELIRNCL 576
FD V W+F++A L A + F I C+
Sbjct: 576 FDSVRWEFIIAALLALGVPTKFINWIHQCI 605
>gb|EOY25454.1| Uncharacterized protein TCM_026877 [Theobroma cacao]
Length = 2367
Score = 46.6 bits (109), Expect(2) = 4e-07
Identities = 24/63 (38%), Positives = 36/63 (57%)
Frame = +2
Query: 587 FFILVNG*GVGSFPSGLGVKQSDPLSPLLFILVAKVFSRGLNSQLQNDTINGFPFSSSLP 766
F +L+NG G F G++Q DP+SP LF++ A+ SRGLN+ + + S+P
Sbjct: 1669 FSLLLNGRTEGYFKFERGLRQGDPISPQLFLIAAEYLSRGLNALYEQYPSLHYSTGVSIP 1728
Query: 767 QSH 775
SH
Sbjct: 1729 VSH 1731
Score = 34.7 bits (78), Expect(2) = 4e-07
Identities = 13/43 (30%), Positives = 26/43 (60%)
Frame = +1
Query: 463 VKV*EVEPFDQVSWQFLLAVLSAFDFRSHFCELIRNCLLNMFF 591
+K+ ++ +D++ W FL+ VL F F + +I+ C+ N +F
Sbjct: 1627 LKLDMMKAYDRLDWSFLIKVLQHFGFNDQWIGMIQKCISNCWF 1669
>gb|EOY14356.1| Uncharacterized protein TCM_033752 [Theobroma cacao]
Length = 2251
Score = 45.1 bits (105), Expect(2) = 1e-06
Identities = 27/62 (43%), Positives = 36/62 (58%)
Frame = +2
Query: 587 FFILVNG*GVGSFPSGLGVKQSDPLSPLLFILVAKVFSRGLNSQLQNDTINGFPFSSSLP 766
F +L+NG G F S G++Q D +SP LFIL A+ SRGLN+ D +SS +P
Sbjct: 1499 FSLLLNGRIEGYFKSERGLRQGDSISPQLFILAAEYLSRGLNALY--DQYPSLHYSSGVP 1556
Query: 767 QS 772
S
Sbjct: 1557 LS 1558
Score = 34.7 bits (78), Expect(2) = 1e-06
Identities = 13/43 (30%), Positives = 26/43 (60%)
Frame = +1
Query: 463 VKV*EVEPFDQVSWQFLLAVLSAFDFRSHFCELIRNCLLNMFF 591
+K+ ++ +D++ W FL+ VL F F + +I+ C+ N +F
Sbjct: 1457 LKLDMMKAYDRLDWSFLIKVLQHFGFNEQWIGMIQKCISNCWF 1499
>gb|EOY02242.1| Uncharacterized protein TCM_016767 [Theobroma cacao]
Length = 1707
Score = 45.1 bits (105), Expect(2) = 1e-06
Identities = 22/40 (55%), Positives = 28/40 (70%)
Frame = +2
Query: 593 ILVNG*GVGSFPSGLGVKQSDPLSPLLFILVAKVFSRGLN 712
+L+NG VG F S G++Q D +SP+LFIL A SRGLN
Sbjct: 1335 LLINGSLVGYFKSERGLRQGDSISPMLFILAADYLSRGLN 1374
Score = 34.3 bits (77), Expect(2) = 1e-06
Identities = 11/40 (27%), Positives = 26/40 (65%)
Frame = +1
Query: 463 VKV*EVEPFDQVSWQFLLAVLSAFDFRSHFCELIRNCLLN 582
+K+ + +D+++W FL ++ F F +H+ +I++C+ N
Sbjct: 1291 LKLDMAKAYDRLNWDFLYLMMEHFGFNAHWINMIKSCISN 1330
>gb|AAG50806.1|AC079281_8 unknown protein [Arabidopsis thaliana]
Length = 1213
Score = 50.4 bits (119), Expect(2) = 2e-06
Identities = 26/63 (41%), Positives = 39/63 (61%)
Frame = +2
Query: 587 FFILVNG*GVGSFPSGLGVKQSDPLSPLLFILVAKVFSRGLNSQLQNDTINGFPFSSSLP 766
F + +NG G F S G++Q DPLSP LF+L + FS L+S+ ++ I+ P +S+L
Sbjct: 632 FTVSINGGNGGFFKSTKGLRQGDPLSPYLFVLAMEAFSNLLHSRYESGLIHYHPKASNLS 691
Query: 767 QSH 775
SH
Sbjct: 692 ISH 694
Score = 28.1 bits (61), Expect(2) = 2e-06
Identities = 13/38 (34%), Positives = 19/38 (50%)
Frame = +1
Query: 463 VKV*EVEPFDQVSWQFLLAVLSAFDFRSHFCELIRNCL 576
+KV + FD V W+F++A L A F I C+
Sbjct: 590 LKVDLKKAFDSVRWEFVIAALRALAIPEKFINWISQCI 627
>ref|XP_006493121.1| PREDICTED: putative ribonuclease H protein At1g65750-like isoform
X1 [Citrus sinensis]
Length = 968
Score = 50.1 bits (118), Expect(2) = 2e-06
Identities = 26/68 (38%), Positives = 38/68 (55%)
Frame = +2
Query: 572 VCLTCFFILVNG*GVGSFPSGLGVKQSDPLSPLLFILVAKVFSRGLNSQLQNDTINGFPF 751
+ T F +L+NG G G++Q PLSP LFI+ A+VF+ L+ N I+G F
Sbjct: 225 ISTTSFSVLINGVAKGLIQPQRGLRQGCPLSPYLFIICAEVFTNLLHQAESNQLIHGLKF 284
Query: 752 SSSLPQSH 775
S +L +H
Sbjct: 285 SGNLSITH 292
Score = 28.5 bits (62), Expect(2) = 2e-06
Identities = 12/43 (27%), Positives = 21/43 (48%)
Frame = +1
Query: 463 VKV*EVEPFDQVSWQFLLAVLSAFDFRSHFCELIRNCLLNMFF 591
+K+ + +D+V W+FL L F + EL+ C+ F
Sbjct: 188 LKLDNSKAYDRVEWEFLRCTLVRLGFSHKWVELVMRCISTTSF 230
>gb|ABE87589.2| RNA-directed DNA polymerase (Reverse transcriptase); Ribonuclease
H; Endonuclease/exonuclease/phosphatase [Medicago
truncatula]
Length = 1246
Score = 47.8 bits (112), Expect(2) = 4e-06
Identities = 24/40 (60%), Positives = 28/40 (70%)
Frame = +2
Query: 593 ILVNG*GVGSFPSGLGVKQSDPLSPLLFILVAKVFSRGLN 712
+LVNG VG F GV+Q DPLSPLLF LV +V SR L+
Sbjct: 629 VLVNGKAVGFFTCSHGVRQGDPLSPLLFCLVEEVLSRALS 668
Score = 30.0 bits (66), Expect(2) = 4e-06
Identities = 15/34 (44%), Positives = 18/34 (52%)
Frame = +1
Query: 463 VKV*EVEPFDQVSWQFLLAVLSAFDFRSHFCELI 564
+KV + FD + W FLLAVL F F F I
Sbjct: 585 LKVDIAKAFDTLDWNFLLAVLQRFGFDEKFVHWI 618
>ref|XP_006364939.1| PREDICTED: uncharacterized protein LOC102581051 [Solanum tuberosum]
Length = 1946
Score = 46.6 bits (109), Expect(2) = 5e-06
Identities = 27/61 (44%), Positives = 33/61 (54%)
Frame = +2
Query: 587 FFILVNG*GVGSFPSGLGVKQSDPLSPLLFILVAKVFSRGLNSQLQNDTINGFPFSSSLP 766
+ ++VNG G F S G+KQ DPLSP LFIL +V SR LN + GF P
Sbjct: 392 YSVIVNGTRHGFFHSTRGLKQGDPLSPALFILRVEVLSRMLNLLHHDPNYKGFQMEIRGP 451
Query: 767 Q 769
Q
Sbjct: 452 Q 452
Score = 30.8 bits (68), Expect(2) = 5e-06
Identities = 14/43 (32%), Positives = 23/43 (53%)
Frame = +1
Query: 463 VKV*EVEPFDQVSWQFLLAVLSAFDFRSHFCELIRNCLLNMFF 591
+K+ + +D VSW F VLSA F F +L+ + N ++
Sbjct: 350 IKLDMAKAYDSVSWSFTCLVLSAMGFGEVFIDLVWRTMSNNWY 392
>gb|AAD21699.1| Contains reverse transcriptase domain (rvt) PF|00078 [Arabidopsis
thaliana]
Length = 1253
Score = 51.2 bits (121), Expect(2) = 5e-06
Identities = 29/63 (46%), Positives = 38/63 (60%)
Frame = +2
Query: 587 FFILVNG*GVGSFPSGLGVKQSDPLSPLLFILVAKVFSRGLNSQLQNDTINGFPFSSSLP 766
F + VNG G F S G++Q +PLSP LF+L +VFS LNS+ Q I+ P +S L
Sbjct: 585 FSVCVNGNTGGFFKSTRGLRQGNPLSPFLFVLAMEVFSSLLNSRFQAGYIHYHPKTSPLS 644
Query: 767 QSH 775
SH
Sbjct: 645 ISH 647
Score = 26.2 bits (56), Expect(2) = 5e-06
Identities = 9/30 (30%), Positives = 14/30 (46%)
Frame = +1
Query: 487 FDQVSWQFLLAVLSAFDFRSHFCELIRNCL 576
FD + W F+++ L A F I C+
Sbjct: 551 FDSIRWDFIISALKAIGIPDRFVYWITQCI 580
>emb|CAN62411.1| hypothetical protein VITISV_029284 [Vitis vinifera]
Length = 817
Score = 51.2 bits (121), Expect(2) = 7e-06
Identities = 27/60 (45%), Positives = 35/60 (58%)
Frame = +2
Query: 566 GIVCLTCFFILVNG*GVGSFPSGLGVKQSDPLSPLLFILVAKVFSRGLNSQLQNDTINGF 745
G + F +LVNG G G F + G++Q DPLSP LF LVA V SR L + + + GF
Sbjct: 192 GCLSSVSFAVLVNGNGKGWFKASRGLRQGDPLSPFLFTLVADVLSRMLLRAEERNALEGF 251
Score = 25.8 bits (55), Expect(2) = 7e-06
Identities = 12/35 (34%), Positives = 19/35 (54%)
Frame = +1
Query: 487 FDQVSWQFLLAVLSAFDFRSHFCELIRNCLLNMFF 591
+D V+W FL VL F + + +R CL ++ F
Sbjct: 165 YDXVTWDFLDHVLEKKGFSPRWRKWMRGCLSSVSF 199
>emb|CAN70593.1| hypothetical protein VITISV_026737 [Vitis vinifera]
Length = 383
Score = 50.4 bits (119), Expect(2) = 7e-06
Identities = 26/53 (49%), Positives = 32/53 (60%)
Frame = +2
Query: 587 FFILVNG*GVGSFPSGLGVKQSDPLSPLLFILVAKVFSRGLNSQLQNDTINGF 745
F IL+N +G F S G++Q DPLSP LFIL +VFS L L+ I GF
Sbjct: 298 FLILINETPIGFFVSSRGLRQMDPLSPFLFILAIEVFSNILKKALEGGFIQGF 350
Score = 26.6 bits (57), Expect(2) = 7e-06
Identities = 9/30 (30%), Positives = 18/30 (60%)
Frame = +1
Query: 487 FDQVSWQFLLAVLSAFDFRSHFCELIRNCL 576
+D V+W+FLLA++ + + +R C+
Sbjct: 264 YDHVNWEFLLAIMEKMGLGAKWVRQMRWCI 293
>ref|XP_006491472.1| PREDICTED: uncharacterized protein LOC102626455 [Citrus sinensis]
Length = 1452
Score = 57.0 bits (136), Expect = 9e-06
Identities = 34/91 (37%), Positives = 46/91 (50%), Gaps = 1/91 (1%)
Frame = +2
Query: 506 NFCLQFCLPLTFVVTFVSLF-GIVCLTCFFILVNG*GVGSFPSGLGVKQSDPLSPLLFIL 682
NF Q L F ++SL + TCF +L+NG VG G++Q PLSP LFIL
Sbjct: 682 NFLEQTMSNLGFSAKWISLIMSCITTTCFSVLINGNPVGLIKPERGLRQGCPLSPYLFIL 741
Query: 683 VAKVFSRGLNSQLQNDTINGFPFSSSLPQSH 775
A+ FS LN + I G F+ + +H
Sbjct: 742 CAEAFSNLLNQAEREQKIRGLKFAQDITITH 772
>ref|XP_004233579.1| PREDICTED: uncharacterized protein LOC101260201 [Solanum
lycopersicum]
Length = 1531
Score = 57.0 bits (136), Expect = 9e-06
Identities = 29/63 (46%), Positives = 39/63 (61%)
Frame = +2
Query: 587 FFILVNG*GVGSFPSGLGVKQSDPLSPLLFILVAKVFSRGLNSQLQNDTINGFPFSSSLP 766
+ +++NG G F S G+KQ DPLSP LFI+ A+VFSR LN QN GF + P
Sbjct: 909 YSVVINGKRHGFFHSTRGLKQGDPLSPALFIIGAEVFSRNLNLLYQNQLYRGFSMEKNGP 968
Query: 767 QSH 775
Q++
Sbjct: 969 QTN 971
>ref|XP_004296004.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
vesca subsp. vesca]
Length = 751
Score = 42.7 bits (99), Expect(2) = 9e-06
Identities = 24/59 (40%), Positives = 33/59 (55%)
Frame = +2
Query: 593 ILVNG*GVGSFPSGLGVKQSDPLSPLLFILVAKVFSRGLNSQLQNDTINGFPFSSSLPQ 769
IL+NG G F GV+Q DPLSP+LF + + SRGL + + + S SLP+
Sbjct: 64 ILINGSPHGFFSCTKGVRQGDPLSPILFCIAEEALSRGLTALFSSKKVR----SISLPR 118
Score = 33.9 bits (76), Expect(2) = 9e-06
Identities = 15/34 (44%), Positives = 22/34 (64%)
Frame = +1
Query: 463 VKV*EVEPFDQVSWQFLLAVLSAFDFRSHFCELI 564
+KV + FD ++WQFL+ VL F F S F +L+
Sbjct: 20 IKVDIAKAFDTLNWQFLIEVLHRFGFGSRFTDLM 53
>gb|ABD28670.2| RNA-directed DNA polymerase (Reverse transcriptase) [Medicago
truncatula]
Length = 642
Score = 42.0 bits (97), Expect(2) = 9e-06
Identities = 21/41 (51%), Positives = 27/41 (65%)
Frame = +2
Query: 590 FILVNG*GVGSFPSGLGVKQSDPLSPLLFILVAKVFSRGLN 712
FI +NG G F GV+Q DPLSPLLF +V +V SR ++
Sbjct: 363 FISMNGAQHGFFNCNRGVRQGDPLSPLLFCIVEEVLSRSIS 403
Score = 34.7 bits (78), Expect(2) = 9e-06
Identities = 15/38 (39%), Positives = 21/38 (55%)
Frame = +1
Query: 463 VKV*EVEPFDQVSWQFLLAVLSAFDFRSHFCELIRNCL 576
+K+ + FD ++W FLL VL F F FC I+ L
Sbjct: 320 LKIDVTKAFDTLNWDFLLLVLKTFGFNELFCNWIKTIL 357
>emb|CAN77417.1| hypothetical protein VITISV_000477 [Vitis vinifera]
Length = 421
Score = 42.0 bits (97), Expect(2) = 9e-06
Identities = 19/38 (50%), Positives = 25/38 (65%)
Frame = +2
Query: 587 FFILVNG*GVGSFPSGLGVKQSDPLSPLLFILVAKVFS 700
F +LVNG G F G++Q DPLSP LF++V + FS
Sbjct: 306 FSVLVNGSPTGFFQGSRGLRQRDPLSPYLFVIVMEAFS 343
Score = 34.7 bits (78), Expect(2) = 9e-06
Identities = 15/35 (42%), Positives = 19/35 (54%)
Frame = +1
Query: 487 FDQVSWQFLLAVLSAFDFRSHFCELIRNCLLNMFF 591
+D V W FLLAVL F +C I+ CL + F
Sbjct: 272 YDHVDWSFLLAVLGKMGFGGRWCSWIKWCLSTVSF 306