BLASTX nr result
ID: Catharanthus22_contig00034739
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus22_contig00034739
(242 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAB87099.1| putative retroelement pol polyprotein [Arabidopsi... 103 3e-20
gb|AAM98191.1| unknown protein [Arabidopsis thaliana] gi|3860380... 103 3e-20
emb|CAN64502.1| hypothetical protein VITISV_020342 [Vitis vinifera] 100 2e-19
emb|CAN60374.1| hypothetical protein VITISV_001215 [Vitis vinifera] 100 3e-19
emb|CAN75292.1| hypothetical protein VITISV_014745 [Vitis vinifera] 99 6e-19
ref|XP_006599979.1| PREDICTED: uncharacterized protein LOC102661... 99 8e-19
ref|XP_006365584.1| PREDICTED: uncharacterized protein LOC102598... 98 1e-18
gb|AAD19784.1| putative retroelement pol polyprotein [Arabidopsi... 97 2e-18
emb|CAN67762.1| hypothetical protein VITISV_040650 [Vitis vinifera] 97 3e-18
emb|CAN71595.1| hypothetical protein VITISV_010143 [Vitis vinifera] 97 3e-18
ref|XP_004228806.1| PREDICTED: uncharacterized protein LOC101252... 96 4e-18
dbj|BAB10743.1| retroelement pol polyprotein-like [Arabidopsis t... 96 4e-18
emb|CAA18107.1| LTR retrotransposon like protein [Arabidopsis th... 96 4e-18
gb|AAG50751.1|AC079733_19 polyprotein, putative [Arabidopsis tha... 96 4e-18
gb|ABD32333.1| polyprotein-like, putative [Medicago truncatula] 96 5e-18
ref|XP_004233852.1| PREDICTED: uncharacterized protein LOC101253... 96 6e-18
gb|AAG51258.1|AC025782_3 Ty1/copia-element polyprotein [Arabidop... 96 6e-18
emb|CAN81026.1| hypothetical protein VITISV_023317 [Vitis vinifera] 96 6e-18
emb|CAN81001.1| hypothetical protein VITISV_006992 [Vitis vinifera] 96 6e-18
emb|CAN62906.1| hypothetical protein VITISV_043610 [Vitis vinifera] 96 6e-18
>gb|AAB87099.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1496
Score = 103 bits (256), Expect = 3e-20
Identities = 49/75 (65%), Positives = 58/75 (77%), Gaps = 1/75 (1%)
Frame = -2
Query: 238 VHQLDINNAFLHGDLEEEVYMSPPPGYNCQ-PGQVCRLNRSLYGLKQASRQWNAKLTKTL 62
VHQ+D++NAFLHGDLEEEVYM PPG+ C P +VCRL +SLYGLKQA R W +KL+ L
Sbjct: 1091 VHQMDVHNAFLHGDLEEEVYMRLPPGFKCSDPSKVCRLRKSLYGLKQAPRCWFSKLSTAL 1150
Query: 61 LLIDFNQSWHDYSLF 17
I F QS+ DYSLF
Sbjct: 1151 RNIGFTQSYEDYSLF 1165
>gb|AAM98191.1| unknown protein [Arabidopsis thaliana] gi|38603804|gb|AAR24647.1|
At2g23330 [Arabidopsis thaliana]
gi|110742535|dbj|BAE99183.1| putative retroelement pol
polyprotein [Arabidopsis thaliana]
Length = 776
Score = 103 bits (256), Expect = 3e-20
Identities = 49/75 (65%), Positives = 58/75 (77%), Gaps = 1/75 (1%)
Frame = -2
Query: 238 VHQLDINNAFLHGDLEEEVYMSPPPGYNCQ-PGQVCRLNRSLYGLKQASRQWNAKLTKTL 62
VHQ+D++NAFLHGDLEEEVYM PPG+ C P +VCRL +SLYGLKQA R W +KL+ L
Sbjct: 371 VHQMDVHNAFLHGDLEEEVYMRLPPGFKCSDPSKVCRLRKSLYGLKQAPRCWFSKLSTAL 430
Query: 61 LLIDFNQSWHDYSLF 17
I F QS+ DYSLF
Sbjct: 431 RNIGFTQSYEDYSLF 445
>emb|CAN64502.1| hypothetical protein VITISV_020342 [Vitis vinifera]
Length = 660
Score = 100 bits (250), Expect = 2e-19
Identities = 47/77 (61%), Positives = 61/77 (79%), Gaps = 1/77 (1%)
Frame = -2
Query: 238 VHQLDINNAFLHGDLEEEVYMSPPPGYNC-QPGQVCRLNRSLYGLKQASRQWNAKLTKTL 62
+HQL++NNAFLHGDL EEVYM PPG++ QVC+L +SLYGL+QASRQWN+KL+ +L
Sbjct: 402 LHQLNVNNAFLHGDLNEEVYMQLPPGFSTPNDPQVCKLKKSLYGLRQASRQWNSKLSSSL 461
Query: 61 LLIDFNQSWHDYSLFVK 11
L FNQ+ D SLF++
Sbjct: 462 LKFGFNQAKSDSSLFIR 478
>emb|CAN60374.1| hypothetical protein VITISV_001215 [Vitis vinifera]
Length = 1535
Score = 99.8 bits (247), Expect = 3e-19
Identities = 48/78 (61%), Positives = 59/78 (75%), Gaps = 2/78 (2%)
Frame = -2
Query: 238 VHQLDINNAFLHGDLEEEVYMSPPPGYNCQPGQ--VCRLNRSLYGLKQASRQWNAKLTKT 65
+HQLD+NNAFLHGDL EE+YMSPPPG Q + VCRL++SLYGLKQASRQW +K +K
Sbjct: 1114 LHQLDVNNAFLHGDLHEEIYMSPPPGLRRQGEENLVCRLHKSLYGLKQASRQWFSKFSKA 1173
Query: 64 LLLIDFNQSWHDYSLFVK 11
+ + QS DYSLF +
Sbjct: 1174 IQAAGYVQSRADYSLFTR 1191
>emb|CAN75292.1| hypothetical protein VITISV_014745 [Vitis vinifera]
Length = 1472
Score = 99.0 bits (245), Expect = 6e-19
Identities = 47/78 (60%), Positives = 59/78 (75%), Gaps = 2/78 (2%)
Frame = -2
Query: 238 VHQLDINNAFLHGDLEEEVYMSPPPGYNCQPGQ--VCRLNRSLYGLKQASRQWNAKLTKT 65
+HQ+D+NNAFLHGDL EE+YMS PPG Q + VCRL++SLYGLKQASRQW AK ++
Sbjct: 1078 LHQMDVNNAFLHGDLHEEIYMSSPPGLRRQGEENLVCRLHKSLYGLKQASRQWFAKFSEA 1137
Query: 64 LLLIDFNQSWHDYSLFVK 11
+ D+ QS DYSLF +
Sbjct: 1138 IQFADYAQSRADYSLFTR 1155
>ref|XP_006599979.1| PREDICTED: uncharacterized protein LOC102661893 [Glycine max]
Length = 328
Score = 98.6 bits (244), Expect = 8e-19
Identities = 50/79 (63%), Positives = 57/79 (72%), Gaps = 1/79 (1%)
Frame = -2
Query: 238 VHQLDINNAFLHGDLEEEVYMSPPPGYNC-QPGQVCRLNRSLYGLKQASRQWNAKLTKTL 62
+ QLD+NNAFLHGDL EEVYM PPPG +P VCRL RSLYGLKQASRQW +L+ L
Sbjct: 13 LRQLDVNNAFLHGDLNEEVYMKPPPGLVMDKPNLVCRLQRSLYGLKQASRQWFTRLSSFL 72
Query: 61 LLIDFNQSWHDYSLFVKGH 5
L F QS D+SLF+ H
Sbjct: 73 LSQGFRQSSVDHSLFLYSH 91
>ref|XP_006365584.1| PREDICTED: uncharacterized protein LOC102598606 [Solanum tuberosum]
Length = 1453
Score = 97.8 bits (242), Expect = 1e-18
Identities = 50/81 (61%), Positives = 57/81 (70%), Gaps = 3/81 (3%)
Frame = -2
Query: 238 VHQLDINNAFLHGDLEEEVYMSPPPGYNC-QPGQVCRLNRSLYGLKQASRQWNAKLTKTL 62
++QLD+NNAFLHGDL EEVYM PPG + G VC+LN+SLYGLKQASRQW KLT L
Sbjct: 799 IYQLDVNNAFLHGDLNEEVYMDVPPGLDVPHTGLVCKLNKSLYGLKQASRQWYEKLTAAL 858
Query: 61 LLIDFNQSWHDYSLFV--KGH 5
+ S HDYSL KGH
Sbjct: 859 NSRGYTHSLHDYSLLFRKKGH 879
>gb|AAD19784.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1501
Score = 97.1 bits (240), Expect = 2e-18
Identities = 47/75 (62%), Positives = 58/75 (77%), Gaps = 1/75 (1%)
Frame = -2
Query: 238 VHQLDINNAFLHGDLEEEVYMSPPPGY-NCQPGQVCRLNRSLYGLKQASRQWNAKLTKTL 62
V+Q+D++NAFLHGDLEEEVYM PPG+ + P +VCRL +SLYGLKQA R W KL+ +L
Sbjct: 1096 VYQMDVHNAFLHGDLEEEVYMKLPPGFRHSHPDKVCRLRKSLYGLKQAPRCWFKKLSDSL 1155
Query: 61 LLIDFNQSWHDYSLF 17
L F QS+ DYSLF
Sbjct: 1156 LRFGFVQSYEDYSLF 1170
>emb|CAN67762.1| hypothetical protein VITISV_040650 [Vitis vinifera]
Length = 1316
Score = 96.7 bits (239), Expect = 3e-18
Identities = 48/75 (64%), Positives = 55/75 (73%), Gaps = 1/75 (1%)
Frame = -2
Query: 238 VHQLDINNAFLHGDLEEEVYMSPPPGYNCQ-PGQVCRLNRSLYGLKQASRQWNAKLTKTL 62
+HQ+D+NNAFLHGDLEEEVYM P G+ +VC+L +SLYGLKQASRQW AKLT L
Sbjct: 911 LHQMDVNNAFLHGDLEEEVYMKLPEGFKATGKNKVCKLQKSLYGLKQASRQWFAKLTTAL 970
Query: 61 LLIDFNQSWHDYSLF 17
F QS DYSLF
Sbjct: 971 KEYGFQQSLADYSLF 985
>emb|CAN71595.1| hypothetical protein VITISV_010143 [Vitis vinifera]
Length = 1523
Score = 96.7 bits (239), Expect = 3e-18
Identities = 46/77 (59%), Positives = 58/77 (75%), Gaps = 1/77 (1%)
Frame = -2
Query: 238 VHQLDINNAFLHGDLEEEVYMSPPPGYNCQ-PGQVCRLNRSLYGLKQASRQWNAKLTKTL 62
+HQLD+NNAFL+GDL E+VYM PPG+ + +VC+L++SLYGLKQASRQW KL+ L
Sbjct: 1073 LHQLDVNNAFLNGDLYEDVYMQLPPGFGRKGEHRVCKLHKSLYGLKQASRQWFLKLSSAL 1132
Query: 61 LLIDFNQSWHDYSLFVK 11
F QSW DYSLF +
Sbjct: 1133 KAAGFKQSWSDYSLFXR 1149
>ref|XP_004228806.1| PREDICTED: uncharacterized protein LOC101252423 [Solanum
lycopersicum]
Length = 753
Score = 96.3 bits (238), Expect = 4e-18
Identities = 48/75 (64%), Positives = 54/75 (72%), Gaps = 1/75 (1%)
Frame = -2
Query: 232 QLDINNAFLHGDLEEEVYMSPPPGYNCQP-GQVCRLNRSLYGLKQASRQWNAKLTKTLLL 56
QLD+NNAFLHGDL EEVYM PP G VC+LN+SLYGLKQASR W AKLT+ L L
Sbjct: 436 QLDVNNAFLHGDLHEEVYMKPPQGLTVDDLSLVCKLNKSLYGLKQASRPWYAKLTEALSL 495
Query: 55 IDFNQSWHDYSLFVK 11
+ S HDYSLF +
Sbjct: 496 RGYVHSHHDYSLFYR 510
>dbj|BAB10743.1| retroelement pol polyprotein-like [Arabidopsis thaliana]
Length = 1109
Score = 96.3 bits (238), Expect = 4e-18
Identities = 46/75 (61%), Positives = 56/75 (74%), Gaps = 1/75 (1%)
Frame = -2
Query: 238 VHQLDINNAFLHGDLEEEVYMSPPPGYNCQ-PGQVCRLNRSLYGLKQASRQWNAKLTKTL 62
VHQ+D++NAFLHGDL+EEVYM P G+ C P +VCRL++SLYGLKQA R W +KL+ L
Sbjct: 704 VHQMDVHNAFLHGDLKEEVYMKLPQGFQCDDPSKVCRLHKSLYGLKQAPRCWFSKLSSAL 763
Query: 61 LLIDFNQSWHDYSLF 17
F QS DYSLF
Sbjct: 764 KQYGFTQSLSDYSLF 778
>emb|CAA18107.1| LTR retrotransposon like protein [Arabidopsis thaliana]
gi|7269049|emb|CAB79159.1| LTR retrotransposon like
protein [Arabidopsis thaliana]
Length = 1109
Score = 96.3 bits (238), Expect = 4e-18
Identities = 46/75 (61%), Positives = 56/75 (74%), Gaps = 1/75 (1%)
Frame = -2
Query: 238 VHQLDINNAFLHGDLEEEVYMSPPPGYNCQ-PGQVCRLNRSLYGLKQASRQWNAKLTKTL 62
VHQ+D++NAFLHGDL+EEVYM P G+ C P +VCRL++SLYGLKQA R W +KL+ L
Sbjct: 704 VHQMDVHNAFLHGDLKEEVYMKLPQGFQCDDPSKVCRLHKSLYGLKQAPRCWFSKLSSAL 763
Query: 61 LLIDFNQSWHDYSLF 17
F QS DYSLF
Sbjct: 764 KQYGFTQSLSDYSLF 778
>gb|AAG50751.1|AC079733_19 polyprotein, putative [Arabidopsis thaliana]
Length = 1468
Score = 96.3 bits (238), Expect = 4e-18
Identities = 46/75 (61%), Positives = 56/75 (74%), Gaps = 1/75 (1%)
Frame = -2
Query: 238 VHQLDINNAFLHGDLEEEVYMSPPPGYNCQ-PGQVCRLNRSLYGLKQASRQWNAKLTKTL 62
VHQ+D++NAFLHGDL+EEVYM P G+ C P +VCRL++SLYGLKQA R W +KL+ L
Sbjct: 1063 VHQMDVHNAFLHGDLKEEVYMKLPQGFQCDDPSKVCRLHKSLYGLKQAPRCWFSKLSSAL 1122
Query: 61 LLIDFNQSWHDYSLF 17
F QS DYSLF
Sbjct: 1123 KQYGFTQSLSDYSLF 1137
>gb|ABD32333.1| polyprotein-like, putative [Medicago truncatula]
Length = 635
Score = 95.9 bits (237), Expect = 5e-18
Identities = 46/77 (59%), Positives = 58/77 (75%), Gaps = 1/77 (1%)
Frame = -2
Query: 238 VHQLDINNAFLHGDLEEEVYMSPPPGYNC-QPGQVCRLNRSLYGLKQASRQWNAKLTKTL 62
+HQLD+NNAFLHGDL+E VY PPG + +P QVC+L++SLYGLKQASR+W KLT L
Sbjct: 204 LHQLDVNNAFLHGDLQENVYKKIPPGLSTFKPNQVCKLSKSLYGLKQASRKWYEKLTTLL 263
Query: 61 LLIDFNQSWHDYSLFVK 11
+ D+ Q+ D SLF K
Sbjct: 264 ISNDYKQAASDASLFTK 280
>ref|XP_004233852.1| PREDICTED: uncharacterized protein LOC101253557 [Solanum
lycopersicum]
Length = 13995
Score = 95.5 bits (236), Expect = 6e-18
Identities = 49/78 (62%), Positives = 57/78 (73%), Gaps = 2/78 (2%)
Frame = -2
Query: 238 VHQLDINNAFLHGDLEEEVYMSPPPGYNCQPGQ--VCRLNRSLYGLKQASRQWNAKLTKT 65
+HQLD+NNAFL GDL EEVYM PPG + P + VC+LN+SLYGLKQASRQW KLT+
Sbjct: 460 IHQLDVNNAFLQGDLHEEVYMDIPPG-SATPHKNLVCKLNKSLYGLKQASRQWYEKLTEA 518
Query: 64 LLLIDFNQSWHDYSLFVK 11
L + S HDYSLF K
Sbjct: 519 LHTRGYEHSPHDYSLFYK 536
>gb|AAG51258.1|AC025782_3 Ty1/copia-element polyprotein [Arabidopsis thaliana]
Length = 1152
Score = 95.5 bits (236), Expect = 6e-18
Identities = 45/82 (54%), Positives = 60/82 (73%), Gaps = 3/82 (3%)
Frame = -2
Query: 238 VHQLDINNAFLHGDLEEEVYMSPPPGYNC-QPGQVCRLNRSLYGLKQASRQWNAKLTKTL 62
+HQ+D++NAFLHGDL+E++YM PPPG+ P VC+L +S+YGLKQA R W KL+ +L
Sbjct: 1039 LHQMDVHNAFLHGDLKEDIYMKPPPGFKTTDPSLVCKLKKSIYGLKQAPRCWFEKLSTSL 1098
Query: 61 LLIDFNQSWHDYSLF--VKGHK 2
L F QS DYSLF ++G K
Sbjct: 1099 LKFGFTQSKKDYSLFTSIRGSK 1120
>emb|CAN81026.1| hypothetical protein VITISV_023317 [Vitis vinifera]
Length = 1158
Score = 95.5 bits (236), Expect = 6e-18
Identities = 46/78 (58%), Positives = 58/78 (74%), Gaps = 2/78 (2%)
Frame = -2
Query: 238 VHQLDINNAFLHGDLEEEVYMSPPPGYNCQPGQ--VCRLNRSLYGLKQASRQWNAKLTKT 65
+HQ+D+NNAFLHGDL EE+YMSPP G Q + VCRL++SLYGLKQASRQW AK ++
Sbjct: 753 IHQMDVNNAFLHGDLHEEIYMSPPLGLRRQGEENLVCRLHKSLYGLKQASRQWFAKFSEA 812
Query: 64 LLLIDFNQSWHDYSLFVK 11
+ + QS DYSLF +
Sbjct: 813 IQSAGYAQSRADYSLFTR 830
>emb|CAN81001.1| hypothetical protein VITISV_006992 [Vitis vinifera]
Length = 1131
Score = 95.5 bits (236), Expect = 6e-18
Identities = 48/78 (61%), Positives = 57/78 (73%), Gaps = 3/78 (3%)
Frame = -2
Query: 235 HQLDINNAFLHGDLEEEVYMSPPPGYNCQPGQ---VCRLNRSLYGLKQASRQWNAKLTKT 65
HQ+D+ NAFLHGDL EEVYM PPG+ C+ G+ VCRLN+SLYGLKQASR W K + T
Sbjct: 726 HQMDVQNAFLHGDLLEEVYMQLPPGF-CRQGETLMVCRLNKSLYGLKQASRSWFQKFSAT 784
Query: 64 LLLIDFNQSWHDYSLFVK 11
+ F+QS DYSLF K
Sbjct: 785 IQQNGFHQSMADYSLFTK 802
>emb|CAN62906.1| hypothetical protein VITISV_043610 [Vitis vinifera]
Length = 1498
Score = 95.5 bits (236), Expect = 6e-18
Identities = 46/78 (58%), Positives = 58/78 (74%), Gaps = 2/78 (2%)
Frame = -2
Query: 238 VHQLDINNAFLHGDLEEEVYMSPPPGYNCQPGQ--VCRLNRSLYGLKQASRQWNAKLTKT 65
+HQ+D+NNAFLHGDL EE+YMSPP G Q + VCRL++SLYGLKQASRQW AK ++
Sbjct: 1093 IHQMDVNNAFLHGDLHEEIYMSPPLGLRRQGEENLVCRLHKSLYGLKQASRQWFAKFSEA 1152
Query: 64 LLLIDFNQSWHDYSLFVK 11
+ + QS DYSLF +
Sbjct: 1153 IQSAGYAQSRADYSLFTR 1170