BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus22_contig00034632
         (429 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EXB32333.1| hypothetical protein L484_005539 [Morus notabilis]      84   2e-14
gb|EMJ25261.1| hypothetical protein PRUPE_ppa015300mg, partial [...    82   1e-13
gb|EOY01105.1| Pentatricopeptide repeat-containing protein, puta...    79   6e-13
gb|EOY01104.1| Tetratricopeptide repeat (TPR)-like superfamily p...    79   6e-13
ref|XP_002525999.1| pentatricopeptide repeat-containing protein,...    78   1e-12
ref|XP_006828472.1| hypothetical protein AMTR_s00060p00144370 [A...    77   3e-12
ref|XP_006293026.1| hypothetical protein CARUB_v10019306mg [Caps...    72   8e-11
ref|XP_006395856.1| hypothetical protein EUTSA_v10003932mg [Eutr...    71   1e-10
ref|NP_178283.1| pentatricopeptide repeat-containing protein [Ar...    71   1e-10
ref|XP_002876773.1| pentatricopeptide repeat-containing protein ...    69   7e-10
ref|XP_004142302.1| PREDICTED: pentatricopeptide repeat-containi...    67   2e-09
ref|XP_004164884.1| PREDICTED: pentatricopeptide repeat-containi...    57   3e-06
ref|XP_004148467.1| PREDICTED: pentatricopeptide repeat-containi...    57   3e-06
ref|XP_006344758.1| PREDICTED: pentatricopeptide repeat-containi...    55   7e-06
ref|XP_004231292.1| PREDICTED: pentatricopeptide repeat-containi...    55   7e-06

>gb|EXB32333.1| hypothetical protein L484_005539 [Morus notabilis]
          Length = 548

 Score = 84.0 bits (206), Expect = 2e-14
 Identities = 37/60 (61%), Positives = 51/60 (85%)
 Frame = -1

Query: 180 QGMLERAECLLFKMLEDGIQPNSVIYTTMIDGEFKKGNIEGALKFLTRMHHQGIRLDVTA 1
           +G LERAE L  KMLEDG++PNSV+YT++IDG F KGN++ A+K++T+M  QG+RLD+TA
Sbjct: 243 RGALERAESLFSKMLEDGVEPNSVVYTSIIDGHFVKGNVDDAVKYMTKMCDQGLRLDMTA 302



 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 41/121 (33%), Positives = 61/121 (50%), Gaps = 17/121 (14%)
 Frame = -1

Query: 345 MVQEALKFFTCHLQRIKASRRFPDRYDFNKSLHKLNISSCGDLSFKLLVTFILK------ 184
           MV+E L+FF  HL+R   + RFP  + FNK LH L  ++CGDLS K+L  F+ K      
Sbjct: 1   MVRETLQFFA-HLRR---TSRFPTPFTFNKLLHHLTSANCGDLSLKILSHFLTKRYVPHP 56

Query: 183 -----------GQGMLERAECLLFKMLEDGIQPNSVIYTTMIDGEFKKGNIEGALKFLTR 37
                        G L  A  ++  M + G  P+ V Y  ++DG  K  ++E A   +++
Sbjct: 57  SSFNSVLSFLCKSGQLRFARNVVDSMPKFGFSPDVVTYNCLVDGFCKNLDVEEACFVVSK 116

Query: 36  M 34
           M
Sbjct: 117 M 117


>gb|EMJ25261.1| hypothetical protein PRUPE_ppa015300mg, partial [Prunus persica]
          Length = 567

 Score = 81.6 bits (200), Expect = 1e-13
 Identities = 37/67 (55%), Positives = 51/67 (76%), Gaps = 3/67 (4%)
 Frame = -1

Query: 192 ILKG---QGMLERAECLLFKMLEDGIQPNSVIYTTMIDGEFKKGNIEGALKFLTRMHHQG 22
           ++KG   QGM ERA+ L  KM EDG++PNS +YT+MIDG  +KGN++ A+K+++RMH QG
Sbjct: 312 LIKGLCMQGMSERADYLFSKMWEDGVEPNSAVYTSMIDGHLQKGNVDDAMKYMSRMHDQG 371

Query: 21  IRLDVTA 1
             LDV A
Sbjct: 372 FNLDVAA 378



 Score = 79.7 bits (195), Expect = 4e-13
 Identities = 46/110 (41%), Positives = 67/110 (60%), Gaps = 17/110 (15%)
 Frame = -1

Query: 279 PDRYDFNKSLHKLNISSCGDLSFKLL------------VTF--ILKG---QGMLERAECL 151
           PD   FN  L+    +   +++F+LL            VT+  ++KG   +GML RA+ L
Sbjct: 43  PDLVTFNVLLNGFCNAGNWEVAFELLEKMRHSSLLPNVVTYNALIKGICIKGMLGRADYL 102

Query: 150 LFKMLEDGIQPNSVIYTTMIDGEFKKGNIEGALKFLTRMHHQGIRLDVTA 1
             KM EDG +PNS +YT+MIDG  KKGN++ A+K++++MH QG  LDV A
Sbjct: 103 FSKMWEDGFEPNSAVYTSMIDGHLKKGNLDDAVKYMSKMHDQGFSLDVAA 152


>gb|EOY01105.1| Pentatricopeptide repeat-containing protein, putative isoform 2
           [Theobroma cacao] gi|508709209|gb|EOY01106.1|
           Pentatricopeptide repeat-containing protein, putative
           isoform 2 [Theobroma cacao]
          Length = 468

 Score = 79.0 bits (193), Expect = 6e-13
 Identities = 35/58 (60%), Positives = 47/58 (81%)
 Frame = -1

Query: 180 QGMLERAECLLFKMLEDGIQPNSVIYTTMIDGEFKKGNIEGALKFLTRMHHQGIRLDV 7
           +GMLERAECL  +ML+D +QPNSV+YT++IDG FKK N+  ALK+L +M  QGI+ D+
Sbjct: 162 KGMLERAECLFLRMLKDKVQPNSVVYTSIIDGHFKKRNVSDALKYLAKMCVQGIKFDM 219


>gb|EOY01104.1| Tetratricopeptide repeat (TPR)-like superfamily protein, putative
           isoform 1 [Theobroma cacao]
          Length = 597

 Score = 79.0 bits (193), Expect = 6e-13
 Identities = 35/58 (60%), Positives = 47/58 (81%)
 Frame = -1

Query: 180 QGMLERAECLLFKMLEDGIQPNSVIYTTMIDGEFKKGNIEGALKFLTRMHHQGIRLDV 7
           +GMLERAECL  +ML+D +QPNSV+YT++IDG FKK N+  ALK+L +M  QGI+ D+
Sbjct: 280 KGMLERAECLFLRMLKDKVQPNSVVYTSIIDGHFKKRNVSDALKYLAKMCVQGIKFDM 337



 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 33/97 (34%), Positives = 51/97 (52%), Gaps = 17/97 (17%)
 Frame = -1

Query: 303 RIKASRRFPDRYDFNKSLHKLNISSCGDLSFKLLVTFILKGQ-----------------G 175
           ++K + ++PD + FNK LH+L  S+CG LS KLL  F+ KG                  G
Sbjct: 48  QLKKTSKYPDPFFFNKLLHRLTASNCGTLSLKLLSFFLSKGYTPHPSSFNSSISFLCKLG 107

Query: 174 MLERAECLLFKMLEDGIQPNSVIYTTMIDGEFKKGNI 64
             + A+ L+  M   G +P+   Y ++IDG FK G++
Sbjct: 108 RSDYAQKLVNSMPFYGCEPDIATYNSLIDGYFKCGDV 144


>ref|XP_002525999.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223534731|gb|EEF36423.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 557

 Score = 77.8 bits (190), Expect = 1e-12
 Identities = 41/89 (46%), Positives = 56/89 (62%)
 Frame = -1

Query: 267 DFNKSLHKLNISSCGDLSFKLLVTFILKGQGMLERAECLLFKMLEDGIQPNSVIYTTMID 88
           D  KS+H  N+      ++  L+    K +GMLERAE    KMLE GI PNS +YT++ID
Sbjct: 136 DMCKSMHLPNV-----YTYAALINGFCK-RGMLERAEWFFLKMLEVGIMPNSTVYTSIID 189

Query: 87  GEFKKGNIEGALKFLTRMHHQGIRLDVTA 1
           G FKKGNI+ A+K+ + M  +  RLD+ A
Sbjct: 190 GHFKKGNIDVAMKYFSEMRKESFRLDIVA 218


>ref|XP_006828472.1| hypothetical protein AMTR_s00060p00144370 [Amborella trichopoda]
           gi|548833220|gb|ERM95888.1| hypothetical protein
           AMTR_s00060p00144370 [Amborella trichopoda]
          Length = 548

 Score = 76.6 bits (187), Expect = 3e-12
 Identities = 35/73 (47%), Positives = 57/73 (78%)
 Frame = -1

Query: 219 LSFKLLVTFILKGQGMLERAECLLFKMLEDGIQPNSVIYTTMIDGEFKKGNIEGALKFLT 40
           +++ +L+  + K QG++ER+E L  +MLE G+ PN+VIYT++IDG FK+GN++ A+ ++ 
Sbjct: 228 VTYNVLLNGLCK-QGLMERSEQLFMQMLERGVIPNAVIYTSLIDGHFKRGNVDEAMGYVK 286

Query: 39  RMHHQGIRLDVTA 1
           +M HQGI+LDV A
Sbjct: 287 KMLHQGIKLDVQA 299


>ref|XP_006293026.1| hypothetical protein CARUB_v10019306mg [Capsella rubella]
           gi|482561733|gb|EOA25924.1| hypothetical protein
           CARUB_v10019306mg [Capsella rubella]
          Length = 645

 Score = 72.0 bits (175), Expect = 8e-11
 Identities = 31/60 (51%), Positives = 49/60 (81%)
 Frame = -1

Query: 180 QGMLERAECLLFKMLEDGIQPNSVIYTTMIDGEFKKGNIEGALKFLTRMHHQGIRLDVTA 1
           QG ++RAE +  +ML+D ++PNS++YTT+IDG F+KG+ + A+KFL +M +QG+RLD+ A
Sbjct: 218 QGKMQRAEEMYSQMLKDRVEPNSLVYTTIIDGYFQKGDSDNAMKFLAKMLNQGMRLDIAA 277


>ref|XP_006395856.1| hypothetical protein EUTSA_v10003932mg [Eutrema salsugineum]
           gi|557092495|gb|ESQ33142.1| hypothetical protein
           EUTSA_v10003932mg [Eutrema salsugineum]
          Length = 559

 Score = 71.2 bits (173), Expect = 1e-10
 Identities = 32/60 (53%), Positives = 47/60 (78%)
 Frame = -1

Query: 180 QGMLERAECLLFKMLEDGIQPNSVIYTTMIDGEFKKGNIEGALKFLTRMHHQGIRLDVTA 1
           +G +ERAE L  +M ED ++PNS++YTT+IDG F KG+ + A+KFL +M +QG+RLD+ A
Sbjct: 246 RGEMERAEGLYSRMHEDKVEPNSLVYTTIIDGYFHKGDADNAMKFLAKMLNQGMRLDIAA 305



 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 38/121 (31%), Positives = 57/121 (47%), Gaps = 17/121 (14%)
 Frame = -1

Query: 345 MVQEALKFFTCHLQRIKASRRFPDRYDFNKSLHKLNISSCGDLSFKLLVTFILKGQ---- 178
           MV+EAL+F    + R++ S   PD    NK +H+L  S+CG LS K L   + +G     
Sbjct: 1   MVREALQF----ISRLRKSSNLPDPITCNKYIHQLINSNCGVLSLKFLAYLLSRGYTPHR 56

Query: 177 -------------GMLERAECLLFKMLEDGIQPNSVIYTTMIDGEFKKGNIEGALKFLTR 37
                        G ++ AE ++  M   G  P+ V Y ++IDG  + G I  A   L R
Sbjct: 57  SSFNSVASFVCKLGQVKFAEYIVHSMPRFGCLPDVVSYNSLIDGHCRNGEIRSASLVLKR 116

Query: 36  M 34
           +
Sbjct: 117 L 117


>ref|NP_178283.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75216739|sp|Q9ZUA2.1|PP141_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At2g01740 gi|4220475|gb|AAD12698.1| hypothetical protein
           [Arabidopsis thaliana] gi|330250397|gb|AEC05491.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           thaliana]
          Length = 559

 Score = 71.2 bits (173), Expect = 1e-10
 Identities = 30/60 (50%), Positives = 50/60 (83%)
 Frame = -1

Query: 180 QGMLERAECLLFKMLEDGIQPNSVIYTTMIDGEFKKGNIEGALKFLTRMHHQGIRLDVTA 1
           +G ++RAE +  +M+ED ++PNS++YTT+IDG F++G+ + A+KFL +M +QG+RLD+TA
Sbjct: 246 KGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGMRLDITA 305



 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 36/114 (31%), Positives = 57/114 (50%), Gaps = 17/114 (14%)
 Frame = -1

Query: 345 MVQEALKFFTCHLQRIKASRRFPDRYDFNKSLHKLNISSCGDLSFKLLVTFILKGQ---- 178
           MV+EAL+F    L R++ S   PD +  NK +H+L  S+CG LS K L   + +G     
Sbjct: 1   MVREALQF----LSRLRKSSNLPDPFTCNKHIHQLINSNCGILSLKFLAYLVSRGYTPHR 56

Query: 177 -------------GMLERAECLLFKMLEDGIQPNSVIYTTMIDGEFKKGNIEGA 55
                        G ++ AE ++  M   G +P+ + Y ++IDG  + G+I  A
Sbjct: 57  SSFNSVVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSA 110


>ref|XP_002876773.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297322611|gb|EFH53032.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 559

 Score = 68.9 bits (167), Expect = 7e-10
 Identities = 29/60 (48%), Positives = 49/60 (81%)
 Frame = -1

Query: 180 QGMLERAECLLFKMLEDGIQPNSVIYTTMIDGEFKKGNIEGALKFLTRMHHQGIRLDVTA 1
           +G ++RA  +  +MLED ++PNS++YTT+I+G F++G+ + A+KFL +M +QG+RLD+TA
Sbjct: 246 KGEMQRAGGMYLRMLEDRVEPNSLVYTTIINGFFQRGDSDNAMKFLAKMLNQGMRLDITA 305


>ref|XP_004142302.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g01740-like [Cucumis sativus]
           gi|449521427|ref|XP_004167731.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At2g01740-like [Cucumis sativus]
          Length = 585

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 30/59 (50%), Positives = 43/59 (72%)
 Frame = -1

Query: 177 GMLERAECLLFKMLEDGIQPNSVIYTTMIDGEFKKGNIEGALKFLTRMHHQGIRLDVTA 1
           GML RA+ L  KML   I PN  +YT++IDG FKKGN++ A+K++ +M  + I+LD+TA
Sbjct: 245 GMLARADSLFEKMLSASILPNCTVYTSIIDGHFKKGNVDDAIKYINQMFDRDIKLDLTA 303


>ref|XP_004164884.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
           mitochondrial-like [Cucumis sativus]
          Length = 657

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 34/99 (34%), Positives = 57/99 (57%)
 Frame = -1

Query: 297 KASRRFPDRYDFNKSLHKLNISSCGDLSFKLLVTFILKGQGMLERAECLLFKMLEDGIQP 118
           KA R F  R  FNK + +  + +C  + +  ++   +K +G +  A  +  +M E GI P
Sbjct: 366 KAGRSFEGRDLFNKFVSQGFVPTC--MPYNTIIDGFIK-EGNINLASNVYREMCEVGITP 422

Query: 117 NSVIYTTMIDGEFKKGNIEGALKFLTRMHHQGIRLDVTA 1
           ++V YT++IDG  K  NI+ ALK L  M  +G+++D+ A
Sbjct: 423 STVTYTSLIDGFCKGNNIDLALKLLNDMKRKGLKMDIKA 461


>ref|XP_004148467.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
           mitochondrial-like [Cucumis sativus]
          Length = 775

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 34/99 (34%), Positives = 57/99 (57%)
 Frame = -1

Query: 297 KASRRFPDRYDFNKSLHKLNISSCGDLSFKLLVTFILKGQGMLERAECLLFKMLEDGIQP 118
           KA R F  R  FNK + +  + +C  + +  ++   +K +G +  A  +  +M E GI P
Sbjct: 484 KAGRSFEGRDLFNKFVSQGFVPTC--MPYNTIIDGFIK-EGNINLASNVYREMCEVGITP 540

Query: 117 NSVIYTTMIDGEFKKGNIEGALKFLTRMHHQGIRLDVTA 1
           ++V YT++IDG  K  NI+ ALK L  M  +G+++D+ A
Sbjct: 541 STVTYTSLIDGFCKGNNIDLALKLLNDMKRKGLKMDIKA 579


>ref|XP_006344758.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09820-like isoform X1 [Solanum tuberosum]
           gi|565355778|ref|XP_006344759.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At1g09820-like isoform X2 [Solanum tuberosum]
          Length = 605

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 25/59 (42%), Positives = 36/59 (61%)
 Frame = -1

Query: 183 GQGMLERAECLLFKMLEDGIQPNSVIYTTMIDGEFKKGNIEGALKFLTRMHHQGIRLDV 7
           G G + +A+ LL +M+E G+ PN   Y T+IDG  K  N+  A+K    M  QG+RLD+
Sbjct: 272 GDGKMYKADALLREMMEQGVSPNERTYNTLIDGFCKDDNVGAAMKLFKEMQLQGMRLDI 330


>ref|XP_004231292.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09820-like [Solanum lycopersicum]
          Length = 605

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 24/59 (40%), Positives = 36/59 (61%)
 Frame = -1

Query: 183 GQGMLERAECLLFKMLEDGIQPNSVIYTTMIDGEFKKGNIEGALKFLTRMHHQGIRLDV 7
           G G + +A+ LL +++E G+ PN   Y T+IDG  K  N+  A+K    M HQG+R D+
Sbjct: 272 GDGKMYKADALLRELVEQGVSPNERTYNTLIDGFCKDDNVGAAMKLFKEMQHQGMRPDI 330