BLASTX nr result

ID: Catharanthus22_contig00034562 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus22_contig00034562
         (312 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EOX97528.1| SAUR-like auxin-responsive protein family, putati...    42   2e-07
ref|XP_002312927.2| auxin-responsive family protein [Populus tri...    42   3e-06

>gb|EOX97528.1| SAUR-like auxin-responsive protein family, putative [Theobroma
           cacao]
          Length = 148

 Score = 41.6 bits (96), Expect(2) = 2e-07
 Identities = 17/27 (62%), Positives = 22/27 (81%)
 Frame = -2

Query: 311 DQKRYSFPICYLNNYIFIELLRMAEEE 231
           D++R+ FPI YLNNYI  EL +M+EEE
Sbjct: 58  DERRFVFPIAYLNNYIIQELFKMSEEE 84



 Score = 38.9 bits (89), Expect(2) = 2e-07
 Identities = 17/28 (60%), Positives = 21/28 (75%)
 Frame = -3

Query: 223 SDGPITFLCEAIFLDYFFSLIQRACNRD 140
           SDGPIT  C+A F++Y  SLIQR  +RD
Sbjct: 89  SDGPITLPCDAAFMEYAVSLIQRRIDRD 116


>ref|XP_002312927.2| auxin-responsive family protein [Populus trichocarpa]
           gi|550331705|gb|EEE86882.2| auxin-responsive family
           protein [Populus trichocarpa]
          Length = 148

 Score = 42.4 bits (98), Expect(2) = 3e-06
 Identities = 19/27 (70%), Positives = 22/27 (81%)
 Frame = -2

Query: 311 DQKRYSFPICYLNNYIFIELLRMAEEE 231
           DQ+R+ FPI YLNN IF ELL M+EEE
Sbjct: 56  DQRRFEFPISYLNNNIFRELLAMSEEE 82



 Score = 34.3 bits (77), Expect(2) = 3e-06
 Identities = 14/26 (53%), Positives = 20/26 (76%)
 Frame = -3

Query: 217 GPITFLCEAIFLDYFFSLIQRACNRD 140
           GPIT LC+A+F+ Y  SL+QR  ++D
Sbjct: 89  GPITLLCDAMFMKYAASLMQRNVDKD 114


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