BLASTX nr result
ID: Catharanthus22_contig00034447
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus22_contig00034447
(458 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004243819.1| PREDICTED: pentatricopeptide repeat-containi... 99 4e-19
ref|XP_006446755.1| hypothetical protein CICLE_v10014349mg [Citr... 96 4e-18
ref|XP_006469041.1| PREDICTED: pentatricopeptide repeat-containi... 94 1e-17
ref|XP_002276142.2| PREDICTED: pentatricopeptide repeat-containi... 89 5e-16
ref|XP_002525134.1| pentatricopeptide repeat-containing protein,... 89 8e-16
ref|XP_002326026.2| hypothetical protein POPTR_0019s12080g [Popu... 87 2e-15
gb|EMJ11805.1| hypothetical protein PRUPE_ppa017274mg [Prunus pe... 86 7e-15
gb|EOY17126.1| Pentatricopeptide repeat (PPR) superfamily protei... 84 3e-14
ref|XP_002876469.1| pentatricopeptide repeat-containing protein ... 80 2e-13
ref|NP_191418.2| pentatricopeptide repeat-containing protein [Ar... 80 3e-13
emb|CAB68197.1| putative protein [Arabidopsis thaliana] 80 3e-13
ref|XP_006402770.1| hypothetical protein EUTSA_v10006485mg, part... 79 5e-13
ref|XP_006290415.1| hypothetical protein CARUB_v10019142mg [Caps... 79 6e-13
gb|EXB36924.1| hypothetical protein L484_016529 [Morus notabilis] 79 8e-13
dbj|BAF01499.1| hypothetical protein [Arabidopsis thaliana] 77 2e-12
ref|XP_004507282.1| PREDICTED: pentatricopeptide repeat-containi... 77 3e-12
ref|XP_004303162.1| PREDICTED: pentatricopeptide repeat-containi... 76 5e-12
ref|XP_003526239.1| PREDICTED: pentatricopeptide repeat-containi... 75 9e-12
gb|EAZ13579.1| hypothetical protein OsJ_03496 [Oryza sativa Japo... 74 2e-11
ref|NP_001172571.1| Os01g0754701 [Oryza sativa Japonica Group] g... 74 2e-11
>ref|XP_004243819.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g58590-like [Solanum lycopersicum]
Length = 753
Score = 99.4 bits (246), Expect = 4e-19
Identities = 43/60 (71%), Positives = 53/60 (88%)
Frame = -1
Query: 458 YKIEPEMDHYHLAVDLLARYGHVKEAEELINQMPFPPNALVWRSFLEGCRRKRTIDSTTA 279
Y +EPEMDHY +AVDLLARYG++ EAE+LI MPFPPNAL+WR FLEGC++KR+ID+T A
Sbjct: 691 YGVEPEMDHYLIAVDLLARYGYLTEAEQLITGMPFPPNALIWRIFLEGCKKKRSIDNTVA 750
>ref|XP_006446755.1| hypothetical protein CICLE_v10014349mg [Citrus clementina]
gi|557549366|gb|ESR59995.1| hypothetical protein
CICLE_v10014349mg [Citrus clementina]
Length = 775
Score = 96.3 bits (238), Expect = 4e-18
Identities = 42/63 (66%), Positives = 52/63 (82%), Gaps = 5/63 (7%)
Frame = -1
Query: 458 YKIEPEMDHYHLAVDLLARYGHVKEAEELINQMPFPPNALVWRSFLEGCRRKR-----TI 294
Y +EPEMDHYH VDLL RYGH+KEAE++I MPFPPNAL+WR+FLEGC+R+R T+
Sbjct: 711 YGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQRRRIAKYDTL 770
Query: 293 DST 285
+ST
Sbjct: 771 NST 773
>ref|XP_006469041.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g58590-like isoform X1 [Citrus sinensis]
gi|568829463|ref|XP_006469042.1| PREDICTED:
pentatricopeptide repeat-containing protein
At3g58590-like isoform X2 [Citrus sinensis]
gi|568829465|ref|XP_006469043.1| PREDICTED:
pentatricopeptide repeat-containing protein
At3g58590-like isoform X3 [Citrus sinensis]
gi|568829467|ref|XP_006469044.1| PREDICTED:
pentatricopeptide repeat-containing protein
At3g58590-like isoform X4 [Citrus sinensis]
gi|568829469|ref|XP_006469045.1| PREDICTED:
pentatricopeptide repeat-containing protein
At3g58590-like isoform X5 [Citrus sinensis]
Length = 740
Score = 94.4 bits (233), Expect = 1e-17
Identities = 42/63 (66%), Positives = 51/63 (80%), Gaps = 5/63 (7%)
Frame = -1
Query: 458 YKIEPEMDHYHLAVDLLARYGHVKEAEELINQMPFPPNALVWRSFLEGCRRKR-----TI 294
Y +EPEMDHYH VDLL RYGH+KEAE++I MPFPPNAL+WR+FLEGC+R R T+
Sbjct: 676 YGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQRCRIAKYDTL 735
Query: 293 DST 285
+ST
Sbjct: 736 NST 738
>ref|XP_002276142.2| PREDICTED: pentatricopeptide repeat-containing protein
At3g58590-like [Vitis vinifera]
Length = 921
Score = 89.4 bits (220), Expect = 5e-16
Identities = 37/55 (67%), Positives = 48/55 (87%)
Frame = -1
Query: 452 IEPEMDHYHLAVDLLARYGHVKEAEELINQMPFPPNALVWRSFLEGCRRKRTIDS 288
IEP +DHYH VDLLAR GH++EAE++I+ MPFPPNAL+WRSFLEGC+R +T ++
Sbjct: 717 IEPNIDHYHCVVDLLARCGHLQEAEQVISNMPFPPNALIWRSFLEGCKRWKTAEN 771
>ref|XP_002525134.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223535593|gb|EEF37261.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 792
Score = 88.6 bits (218), Expect = 8e-16
Identities = 36/54 (66%), Positives = 47/54 (87%)
Frame = -1
Query: 458 YKIEPEMDHYHLAVDLLARYGHVKEAEELINQMPFPPNALVWRSFLEGCRRKRT 297
Y +EPEMDHYH VDL +R+GHVKEAE++I+ MP PPNAL+WR+FLEGC++ R+
Sbjct: 676 YGLEPEMDHYHCLVDLFSRHGHVKEAEKVISSMPCPPNALIWRTFLEGCKKYRS 729
>ref|XP_002326026.2| hypothetical protein POPTR_0019s12080g [Populus trichocarpa]
gi|550317335|gb|EEF00408.2| hypothetical protein
POPTR_0019s12080g [Populus trichocarpa]
Length = 738
Score = 87.4 bits (215), Expect = 2e-15
Identities = 36/56 (64%), Positives = 48/56 (85%)
Frame = -1
Query: 458 YKIEPEMDHYHLAVDLLARYGHVKEAEELINQMPFPPNALVWRSFLEGCRRKRTID 291
Y IEP+MDHYH VDLLAR GH++EAE++I+ MPFPP+A +WRSFLEGC+++R +
Sbjct: 676 YHIEPDMDHYHCLVDLLARNGHLEEAEKVISCMPFPPDAQIWRSFLEGCKKRRNTE 731
>gb|EMJ11805.1| hypothetical protein PRUPE_ppa017274mg [Prunus persica]
Length = 665
Score = 85.5 bits (210), Expect = 7e-15
Identities = 35/50 (70%), Positives = 42/50 (84%)
Frame = -1
Query: 458 YKIEPEMDHYHLAVDLLARYGHVKEAEELINQMPFPPNALVWRSFLEGCR 309
Y +EPEMDHYH VDLLA+ GHV EAE +I+ MPFPPN ++WRSFLEGC+
Sbjct: 603 YGVEPEMDHYHCMVDLLAKCGHVTEAETVISNMPFPPNVIIWRSFLEGCK 652
>gb|EOY17126.1| Pentatricopeptide repeat (PPR) superfamily protein, putative
[Theobroma cacao]
Length = 744
Score = 83.6 bits (205), Expect = 3e-14
Identities = 36/56 (64%), Positives = 46/56 (82%)
Frame = -1
Query: 458 YKIEPEMDHYHLAVDLLARYGHVKEAEELINQMPFPPNALVWRSFLEGCRRKRTID 291
Y +EP+MDHYH VDLLAR+G +KEAE++I M FPP+AL+WRSFLEGC+R T +
Sbjct: 677 YGLEPKMDHYHCMVDLLARHGKLKEAEQIIAGMAFPPDALIWRSFLEGCKRHITTE 732
>ref|XP_002876469.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297322307|gb|EFH52728.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 741
Score = 80.5 bits (197), Expect = 2e-13
Identities = 36/51 (70%), Positives = 43/51 (84%)
Frame = -1
Query: 458 YKIEPEMDHYHLAVDLLARYGHVKEAEELINQMPFPPNALVWRSFLEGCRR 306
Y IEPEMDHY AVDLLAR G++KEAE LI++MPFP +A VWR+FL+GC R
Sbjct: 676 YGIEPEMDHYRCAVDLLARNGYLKEAEHLIHRMPFPADAPVWRTFLDGCNR 726
>ref|NP_191418.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218525906|sp|Q0WN01.2|PP286_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At3g58590 gi|332646281|gb|AEE79802.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 741
Score = 80.1 bits (196), Expect = 3e-13
Identities = 35/51 (68%), Positives = 42/51 (82%)
Frame = -1
Query: 458 YKIEPEMDHYHLAVDLLARYGHVKEAEELINQMPFPPNALVWRSFLEGCRR 306
Y +EPEMDHY AVDLLAR G++KEAE LI +MPFP +A VWR+FL+GC R
Sbjct: 676 YGVEPEMDHYRCAVDLLARNGYLKEAEHLIREMPFPADAPVWRTFLDGCNR 726
>emb|CAB68197.1| putative protein [Arabidopsis thaliana]
Length = 810
Score = 80.1 bits (196), Expect = 3e-13
Identities = 35/51 (68%), Positives = 42/51 (82%)
Frame = -1
Query: 458 YKIEPEMDHYHLAVDLLARYGHVKEAEELINQMPFPPNALVWRSFLEGCRR 306
Y +EPEMDHY AVDLLAR G++KEAE LI +MPFP +A VWR+FL+GC R
Sbjct: 745 YGVEPEMDHYRCAVDLLARNGYLKEAEHLIREMPFPADAPVWRTFLDGCNR 795
>ref|XP_006402770.1| hypothetical protein EUTSA_v10006485mg, partial [Eutrema
salsugineum] gi|557103869|gb|ESQ44223.1| hypothetical
protein EUTSA_v10006485mg, partial [Eutrema salsugineum]
Length = 691
Score = 79.3 bits (194), Expect = 5e-13
Identities = 37/59 (62%), Positives = 45/59 (76%)
Frame = -1
Query: 458 YKIEPEMDHYHLAVDLLARYGHVKEAEELINQMPFPPNALVWRSFLEGCRRKRTIDSTT 282
Y +EPEMDHY AVDLLAR G++KEAE+LI MPFP +A VWR+FL+GC R S+T
Sbjct: 629 YGVEPEMDHYRCAVDLLARNGYLKEAEQLICGMPFPADAPVWRTFLDGCNRFAAEQSST 687
>ref|XP_006290415.1| hypothetical protein CARUB_v10019142mg [Capsella rubella]
gi|482559122|gb|EOA23313.1| hypothetical protein
CARUB_v10019142mg [Capsella rubella]
Length = 741
Score = 79.0 bits (193), Expect = 6e-13
Identities = 35/51 (68%), Positives = 42/51 (82%)
Frame = -1
Query: 458 YKIEPEMDHYHLAVDLLARYGHVKEAEELINQMPFPPNALVWRSFLEGCRR 306
Y +EPEMDHY AVDLLAR G++KEAE LI+ MPFP +A VWR+FL+GC R
Sbjct: 676 YGVEPEMDHYRCAVDLLARNGYLKEAEHLIHGMPFPADAPVWRTFLDGCNR 726
>gb|EXB36924.1| hypothetical protein L484_016529 [Morus notabilis]
Length = 675
Score = 78.6 bits (192), Expect = 8e-13
Identities = 33/54 (61%), Positives = 41/54 (75%)
Frame = -1
Query: 458 YKIEPEMDHYHLAVDLLARYGHVKEAEELINQMPFPPNALVWRSFLEGCRRKRT 297
Y +EPEM HY VDLLA+ GH +E E++I MPFPPNA++WRSFLEG +R T
Sbjct: 619 YGVEPEMQHYQNVVDLLAKSGHAREVEKVIASMPFPPNAMIWRSFLEGSKRHET 672
>dbj|BAF01499.1| hypothetical protein [Arabidopsis thaliana]
Length = 741
Score = 77.4 bits (189), Expect = 2e-12
Identities = 34/51 (66%), Positives = 41/51 (80%)
Frame = -1
Query: 458 YKIEPEMDHYHLAVDLLARYGHVKEAEELINQMPFPPNALVWRSFLEGCRR 306
Y +EP MDHY AVDLLAR G++KEAE LI +MPFP +A VWR+FL+GC R
Sbjct: 676 YGVEPGMDHYRCAVDLLARNGYLKEAEHLIREMPFPADAPVWRTFLDGCNR 726
>ref|XP_004507282.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g58590-like [Cicer arietinum]
Length = 727
Score = 76.6 bits (187), Expect = 3e-12
Identities = 32/52 (61%), Positives = 41/52 (78%)
Frame = -1
Query: 458 YKIEPEMDHYHLAVDLLARYGHVKEAEELINQMPFPPNALVWRSFLEGCRRK 303
Y I+PE DHYH VDLLA+ G +KEAEE++ MPFPPNA +WR F+EG +R+
Sbjct: 672 YGIQPEHDHYHCIVDLLAKNGQIKEAEEVMESMPFPPNASIWRCFVEGFKRQ 723
>ref|XP_004303162.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g58590-like [Fragaria vesca subsp. vesca]
Length = 435
Score = 75.9 bits (185), Expect = 5e-12
Identities = 30/50 (60%), Positives = 38/50 (76%)
Frame = -1
Query: 458 YKIEPEMDHYHLAVDLLARYGHVKEAEELINQMPFPPNALVWRSFLEGCR 309
Y +EP+MDHY VDLL + GHV EA +I+ MPFPPN ++WR FLEGC+
Sbjct: 371 YGVEPKMDHYQCVVDLLVKVGHVTEAGNIISSMPFPPNMIIWRCFLEGCK 420
>ref|XP_003526239.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g58590-like [Glycine max]
Length = 732
Score = 75.1 bits (183), Expect = 9e-12
Identities = 33/52 (63%), Positives = 40/52 (76%)
Frame = -1
Query: 458 YKIEPEMDHYHLAVDLLARYGHVKEAEELINQMPFPPNALVWRSFLEGCRRK 303
Y + PE DHYH VDLLA+ G +KEAE++I MPFPPNA +WRSFLEG R+
Sbjct: 677 YGVPPEHDHYHCVVDLLAKNGQIKEAEKIIACMPFPPNANIWRSFLEGYSRQ 728
>gb|EAZ13579.1| hypothetical protein OsJ_03496 [Oryza sativa Japonica Group]
Length = 626
Score = 74.3 bits (181), Expect = 2e-11
Identities = 32/57 (56%), Positives = 43/57 (75%)
Frame = -1
Query: 458 YKIEPEMDHYHLAVDLLARYGHVKEAEELINQMPFPPNALVWRSFLEGCRRKRTIDS 288
Y IEPEM+HY VD+L + GH+KEAE +I MPF P+A+VWR+FL+GC+ ID+
Sbjct: 566 YSIEPEMEHYICVVDMLCKCGHLKEAEVVIRGMPFQPSAVVWRTFLQGCQTYGMIDT 622
>ref|NP_001172571.1| Os01g0754701 [Oryza sativa Japonica Group]
gi|57900338|dbj|BAD87291.1| pentatricopeptide (PPR)
repeat-containing protein-like [Oryza sativa Japonica
Group] gi|125527747|gb|EAY75861.1| hypothetical protein
OsI_03779 [Oryza sativa Indica Group]
gi|255673696|dbj|BAH91301.1| Os01g0754701 [Oryza sativa
Japonica Group]
Length = 663
Score = 74.3 bits (181), Expect = 2e-11
Identities = 32/57 (56%), Positives = 43/57 (75%)
Frame = -1
Query: 458 YKIEPEMDHYHLAVDLLARYGHVKEAEELINQMPFPPNALVWRSFLEGCRRKRTIDS 288
Y IEPEM+HY VD+L + GH+KEAE +I MPF P+A+VWR+FL+GC+ ID+
Sbjct: 603 YSIEPEMEHYICVVDMLCKCGHLKEAEVVIRGMPFQPSAVVWRTFLQGCQTYGMIDT 659