BLASTX nr result

ID: Catharanthus22_contig00034417 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus22_contig00034417
         (401 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003634444.1| PREDICTED: pollen-specific leucine-rich repe...    61   2e-07
ref|XP_006384469.1| hypothetical protein POPTR_0004s153601g, par...    56   6e-06
gb|EOX98154.1| Leucine-rich repeat family protein [Theobroma cacao]    55   1e-05

>ref|XP_003634444.1| PREDICTED: pollen-specific leucine-rich repeat extensin-like
           protein 1-like [Vitis vinifera]
          Length = 534

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 27/63 (42%), Positives = 37/63 (58%), Gaps = 3/63 (4%)
 Frame = -2

Query: 400 CEPPIEDGIVMYDEMNCLLSRPQQRTKAACSPILENPVNCGKDSCRGAPARKSP---SVP 230
           CEPP    I + D  NCL  RP+Q++ A C+P++  PV+C K  C G  +  SP   S P
Sbjct: 348 CEPPSRTDITLDDTSNCLPDRPKQKSAATCNPVVSRPVDCSKAKCGGGASTPSPSPSSPP 407

Query: 229 GDE 221
           GD+
Sbjct: 408 GDK 410


>ref|XP_006384469.1| hypothetical protein POPTR_0004s153601g, partial [Populus
           trichocarpa] gi|550341087|gb|ERP62266.1| hypothetical
           protein POPTR_0004s153601g, partial [Populus
           trichocarpa]
          Length = 552

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 22/54 (40%), Positives = 30/54 (55%)
 Frame = -2

Query: 400 CEPPIEDGIVMYDEMNCLLSRPQQRTKAACSPILENPVNCGKDSCRGAPARKSP 239
           C PP    IV+ D  NCL  RP+Q++   C P++  PV+C KD C G     +P
Sbjct: 350 CVPPSRKDIVLDDTSNCLSDRPKQKSARTCYPVVSRPVDCSKDKCAGGGGSSNP 403


>gb|EOX98154.1| Leucine-rich repeat family protein [Theobroma cacao]
          Length = 726

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 23/57 (40%), Positives = 31/57 (54%)
 Frame = -2

Query: 400 CEPPIEDGIVMYDEMNCLLSRPQQRTKAACSPILENPVNCGKDSCRGAPARKSPSVP 230
           C PP    IV+ D  NCL  RP+Q++   C P++  PV+C KD C G  +   P  P
Sbjct: 352 CIPPSRKDIVIDDTSNCLGGRPKQKSAKECYPVVSRPVDCSKDKCGGGSSPSKPHPP 408


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