BLASTX nr result
ID: Catharanthus22_contig00034371
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus22_contig00034371
(392 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI38093.3| unnamed protein product [Vitis vinifera] 68 4e-12
ref|XP_003541530.1| PREDICTED: pre-mRNA-splicing factor CWC22 ho... 75 1e-11
ref|XP_003530707.1| PREDICTED: pre-mRNA-splicing factor CWC22 ho... 75 1e-11
gb|ESW18300.1| hypothetical protein PHAVU_006G029300g [Phaseolus... 74 2e-11
ref|XP_006423264.1| hypothetical protein CICLE_v10027820mg [Citr... 74 3e-11
ref|XP_006423263.1| hypothetical protein CICLE_v10027820mg [Citr... 74 3e-11
ref|XP_002530492.1| cell cycle control protein cwf22, putative [... 73 4e-11
ref|XP_004513404.1| PREDICTED: pre-mRNA-splicing factor CWC22 ho... 72 8e-11
ref|XP_004244401.1| PREDICTED: pre-mRNA-splicing factor CWC22 ho... 72 8e-11
ref|XP_004960688.1| PREDICTED: pre-mRNA-splicing factor CWC22 ho... 71 1e-10
ref|XP_002456069.1| hypothetical protein SORBIDRAFT_03g029810 [S... 71 1e-10
ref|XP_006367294.1| PREDICTED: pre-mRNA-splicing factor CWC22 ho... 70 3e-10
ref|XP_004238595.1| PREDICTED: pre-mRNA-splicing factor CWC22 ho... 70 3e-10
gb|EXC36384.1| Pre-mRNA-splicing factor CWC22-like protein [Moru... 70 4e-10
ref|XP_004162101.1| PREDICTED: LOW QUALITY PROTEIN: pre-mRNA-spl... 70 4e-10
ref|XP_004142129.1| PREDICTED: pre-mRNA-splicing factor CWC22 ho... 70 4e-10
gb|ESW20227.1| hypothetical protein PHAVU_006G191000g [Phaseolus... 69 5e-10
ref|XP_006664468.1| PREDICTED: pre-mRNA-splicing factor CWC22 ho... 69 6e-10
ref|NP_001066507.1| Os12g0256300 [Oryza sativa Japonica Group] g... 69 6e-10
gb|EEE53027.1| hypothetical protein OsJ_35744 [Oryza sativa Japo... 69 6e-10
>emb|CBI38093.3| unnamed protein product [Vitis vinifera]
Length = 2607
Score = 67.8 bits (164), Expect(2) = 4e-12
Identities = 32/67 (47%), Positives = 45/67 (67%)
Frame = -1
Query: 377 LIKCLLDIRKSDFLNFPSILPEFDIVELDDQVTHEISYSNDIDPEMSLDIFHPNSNLLTD 198
LI+ L IRK+ F P++ PE D+VE +DQ+THEIS IDPE++LDIF P+ L
Sbjct: 134 LIEGLFAIRKAKFQGHPAVRPELDLVEQEDQLTHEISLEEKIDPEITLDIFKPDPQFLES 193
Query: 197 DEQYNFL 177
+++Y L
Sbjct: 194 EKRYEEL 200
Score = 28.5 bits (62), Expect(2) = 4e-12
Identities = 12/15 (80%), Positives = 14/15 (93%)
Frame = -2
Query: 58 MSSVYFEEAGHKLLR 14
MSS+ FEEAGHKLL+
Sbjct: 232 MSSIDFEEAGHKLLK 246
>ref|XP_003541530.1| PREDICTED: pre-mRNA-splicing factor CWC22 homolog [Glycine max]
Length = 860
Score = 74.7 bits (182), Expect = 1e-11
Identities = 33/67 (49%), Positives = 49/67 (73%)
Frame = -1
Query: 377 LIKCLLDIRKSDFLNFPSILPEFDIVELDDQVTHEISYSNDIDPEMSLDIFHPNSNLLTD 198
LI+ L IRK+ F +P++ PE D+VE +DQ+THE+S +IDPE+SLDIF P+ N L +
Sbjct: 490 LIEGLFAIRKAKFQGYPAVRPELDLVEQEDQITHEVSLDEEIDPEISLDIFKPDPNFLEN 549
Query: 197 DEQYNFL 177
+++Y L
Sbjct: 550 EKRYEEL 556
>ref|XP_003530707.1| PREDICTED: pre-mRNA-splicing factor CWC22 homolog isoform X1
[Glycine max] gi|571473788|ref|XP_006586031.1|
PREDICTED: pre-mRNA-splicing factor CWC22 homolog
isoform X2 [Glycine max]
Length = 871
Score = 74.7 bits (182), Expect = 1e-11
Identities = 33/67 (49%), Positives = 49/67 (73%)
Frame = -1
Query: 377 LIKCLLDIRKSDFLNFPSILPEFDIVELDDQVTHEISYSNDIDPEMSLDIFHPNSNLLTD 198
LI+ L IRK+ F +P++ PE D+VE +DQ+THE+S +IDPE+SLDIF P+ N L +
Sbjct: 506 LIEGLFAIRKAKFQGYPAVRPELDLVEQEDQITHEVSLDEEIDPEISLDIFKPDPNFLEN 565
Query: 197 DEQYNFL 177
+++Y L
Sbjct: 566 EKRYEEL 572
>gb|ESW18300.1| hypothetical protein PHAVU_006G029300g [Phaseolus vulgaris]
Length = 866
Score = 73.9 bits (180), Expect = 2e-11
Identities = 33/67 (49%), Positives = 49/67 (73%)
Frame = -1
Query: 377 LIKCLLDIRKSDFLNFPSILPEFDIVELDDQVTHEISYSNDIDPEMSLDIFHPNSNLLTD 198
LI+ L IRK+ F +P++ PE D+VE +DQ+THE+S +IDPE+SLDIF P+ N L +
Sbjct: 498 LIEGLFAIRKAKFQGYPAVRPELDLVEQEDQLTHEVSLDEEIDPEISLDIFKPDPNFLEN 557
Query: 197 DEQYNFL 177
+++Y L
Sbjct: 558 EKRYEEL 564
>ref|XP_006423264.1| hypothetical protein CICLE_v10027820mg [Citrus clementina]
gi|568867638|ref|XP_006487141.1| PREDICTED:
pre-mRNA-splicing factor CWC22 homolog [Citrus sinensis]
gi|557525198|gb|ESR36504.1| hypothetical protein
CICLE_v10027820mg [Citrus clementina]
Length = 832
Score = 73.6 bits (179), Expect = 3e-11
Identities = 31/64 (48%), Positives = 50/64 (78%)
Frame = -1
Query: 377 LIKCLLDIRKSDFLNFPSILPEFDIVELDDQVTHEISYSNDIDPEMSLDIFHPNSNLLTD 198
LI+ L IRK+ F +P++ PE D+V+++DQ+THEIS ++IDPE++LDIF P+ N L +
Sbjct: 458 LIEGLFAIRKAKFQGYPAVRPELDLVDIEDQLTHEISLQDEIDPEITLDIFKPDPNFLDN 517
Query: 197 DEQY 186
+++Y
Sbjct: 518 EKRY 521
>ref|XP_006423263.1| hypothetical protein CICLE_v10027820mg [Citrus clementina]
gi|557525197|gb|ESR36503.1| hypothetical protein
CICLE_v10027820mg [Citrus clementina]
Length = 709
Score = 73.6 bits (179), Expect = 3e-11
Identities = 31/64 (48%), Positives = 50/64 (78%)
Frame = -1
Query: 377 LIKCLLDIRKSDFLNFPSILPEFDIVELDDQVTHEISYSNDIDPEMSLDIFHPNSNLLTD 198
LI+ L IRK+ F +P++ PE D+V+++DQ+THEIS ++IDPE++LDIF P+ N L +
Sbjct: 458 LIEGLFAIRKAKFQGYPAVRPELDLVDIEDQLTHEISLQDEIDPEITLDIFKPDPNFLDN 517
Query: 197 DEQY 186
+++Y
Sbjct: 518 EKRY 521
>ref|XP_002530492.1| cell cycle control protein cwf22, putative [Ricinus communis]
gi|223529949|gb|EEF31876.1| cell cycle control protein
cwf22, putative [Ricinus communis]
Length = 810
Score = 72.8 bits (177), Expect = 4e-11
Identities = 33/67 (49%), Positives = 49/67 (73%)
Frame = -1
Query: 377 LIKCLLDIRKSDFLNFPSILPEFDIVELDDQVTHEISYSNDIDPEMSLDIFHPNSNLLTD 198
LI+ L IRK+ F +P++ PE D+VE +DQ+THEIS DIDPE++LDIF P+ + L +
Sbjct: 407 LIEGLFAIRKAKFQGYPAVRPELDLVEQEDQLTHEISLQEDIDPEITLDIFKPDPDFLEN 466
Query: 197 DEQYNFL 177
+++Y L
Sbjct: 467 EKRYEEL 473
>ref|XP_004513404.1| PREDICTED: pre-mRNA-splicing factor CWC22 homolog [Cicer arietinum]
Length = 803
Score = 72.0 bits (175), Expect = 8e-11
Identities = 33/67 (49%), Positives = 48/67 (71%)
Frame = -1
Query: 377 LIKCLLDIRKSDFLNFPSILPEFDIVELDDQVTHEISYSNDIDPEMSLDIFHPNSNLLTD 198
LI+ L IRK+ F FP++ PE D+VE +DQ+THE+S IDPE+SLDIF P+ N + +
Sbjct: 439 LIEGLFAIRKAKFQGFPAVRPELDLVEQEDQLTHEVSLDEVIDPEISLDIFKPDPNYMEN 498
Query: 197 DEQYNFL 177
+++Y L
Sbjct: 499 EKRYEEL 505
>ref|XP_004244401.1| PREDICTED: pre-mRNA-splicing factor CWC22 homolog [Solanum
lycopersicum]
Length = 920
Score = 72.0 bits (175), Expect = 8e-11
Identities = 32/67 (47%), Positives = 48/67 (71%)
Frame = -1
Query: 377 LIKCLLDIRKSDFLNFPSILPEFDIVELDDQVTHEISYSNDIDPEMSLDIFHPNSNLLTD 198
LI+ L +RK+ F + ++ PE D+VE +DQ+THE+S S+ IDPE++LDIF PN N L +
Sbjct: 555 LIESLFALRKAKFQGYQAVRPELDLVEQEDQLTHEVSLSDTIDPEITLDIFKPNPNFLEN 614
Query: 197 DEQYNFL 177
+ +Y L
Sbjct: 615 ERKYEEL 621
>ref|XP_004960688.1| PREDICTED: pre-mRNA-splicing factor CWC22 homolog [Setaria italica]
Length = 793
Score = 71.2 bits (173), Expect = 1e-10
Identities = 33/67 (49%), Positives = 46/67 (68%)
Frame = -1
Query: 377 LIKCLLDIRKSDFLNFPSILPEFDIVELDDQVTHEISYSNDIDPEMSLDIFHPNSNLLTD 198
LI+ L IRK+ F FP+I PE D+VE +DQ THEIS +D+DPE +L++F N N + D
Sbjct: 426 LIEGLFAIRKAKFQGFPAIRPELDLVEQEDQFTHEISLEDDLDPETNLNVFRANPNFVED 485
Query: 197 DEQYNFL 177
++ Y L
Sbjct: 486 EKAYENL 492
>ref|XP_002456069.1| hypothetical protein SORBIDRAFT_03g029810 [Sorghum bicolor]
gi|241928044|gb|EES01189.1| hypothetical protein
SORBIDRAFT_03g029810 [Sorghum bicolor]
Length = 792
Score = 71.2 bits (173), Expect = 1e-10
Identities = 33/67 (49%), Positives = 46/67 (68%)
Frame = -1
Query: 377 LIKCLLDIRKSDFLNFPSILPEFDIVELDDQVTHEISYSNDIDPEMSLDIFHPNSNLLTD 198
LI+ L IRK+ F FP+I PE D+VE +DQ THEIS +D+DPE +L++F N N + D
Sbjct: 425 LIEGLFAIRKAKFQGFPAIRPELDLVEQEDQFTHEISLEDDLDPETNLNVFRANPNFVED 484
Query: 197 DEQYNFL 177
++ Y L
Sbjct: 485 EKAYENL 491
>ref|XP_006367294.1| PREDICTED: pre-mRNA-splicing factor CWC22 homolog [Solanum
tuberosum]
Length = 951
Score = 70.1 bits (170), Expect = 3e-10
Identities = 31/67 (46%), Positives = 48/67 (71%)
Frame = -1
Query: 377 LIKCLLDIRKSDFLNFPSILPEFDIVELDDQVTHEISYSNDIDPEMSLDIFHPNSNLLTD 198
LI+ L +RK+ F + ++ PE D+VE +DQ+THE+S S+ IDPE++LDIF P+ N L +
Sbjct: 588 LIESLFALRKAKFQGYQAVRPELDLVEQEDQLTHEVSLSDTIDPEIALDIFKPDPNFLEN 647
Query: 197 DEQYNFL 177
+ +Y L
Sbjct: 648 ERKYEEL 654
>ref|XP_004238595.1| PREDICTED: pre-mRNA-splicing factor CWC22 homolog [Solanum
lycopersicum]
Length = 860
Score = 70.1 bits (170), Expect = 3e-10
Identities = 31/67 (46%), Positives = 48/67 (71%)
Frame = -1
Query: 377 LIKCLLDIRKSDFLNFPSILPEFDIVELDDQVTHEISYSNDIDPEMSLDIFHPNSNLLTD 198
LI+ L +RK+ F + ++ PE D+VE +DQ+THE+S S+ IDPE++LDIF P+ N L +
Sbjct: 497 LIESLFALRKAKFQGYQAVRPELDLVEQEDQLTHEVSLSDTIDPEIALDIFKPDPNFLEN 556
Query: 197 DEQYNFL 177
+ +Y L
Sbjct: 557 ERKYEEL 563
>gb|EXC36384.1| Pre-mRNA-splicing factor CWC22-like protein [Morus notabilis]
Length = 850
Score = 69.7 bits (169), Expect = 4e-10
Identities = 31/67 (46%), Positives = 48/67 (71%)
Frame = -1
Query: 377 LIKCLLDIRKSDFLNFPSILPEFDIVELDDQVTHEISYSNDIDPEMSLDIFHPNSNLLTD 198
LI+ L IRK+ F +P++ PE D+VE +DQ+THEIS +IDPE++LD+F P+ N +
Sbjct: 480 LIEGLFAIRKAKFQGYPAVRPELDLVEQEDQLTHEISLQEEIDPEITLDLFKPDPNYSEN 539
Query: 197 DEQYNFL 177
+++Y L
Sbjct: 540 EKRYEEL 546
>ref|XP_004162101.1| PREDICTED: LOW QUALITY PROTEIN: pre-mRNA-splicing factor CWC22
homolog, partial [Cucumis sativus]
Length = 780
Score = 69.7 bits (169), Expect = 4e-10
Identities = 32/67 (47%), Positives = 48/67 (71%)
Frame = -1
Query: 377 LIKCLLDIRKSDFLNFPSILPEFDIVELDDQVTHEISYSNDIDPEMSLDIFHPNSNLLTD 198
LI+ L IRK+ F +P++ PE D+VE +DQ+THEIS +IDPE++LDIF + N L +
Sbjct: 427 LIEGLFAIRKAKFEGYPAVRPELDLVEQEDQLTHEISLQEEIDPEITLDIFKSDPNFLEN 486
Query: 197 DEQYNFL 177
+++Y L
Sbjct: 487 EKRYEDL 493
>ref|XP_004142129.1| PREDICTED: pre-mRNA-splicing factor CWC22 homolog [Cucumis sativus]
Length = 797
Score = 69.7 bits (169), Expect = 4e-10
Identities = 32/67 (47%), Positives = 48/67 (71%)
Frame = -1
Query: 377 LIKCLLDIRKSDFLNFPSILPEFDIVELDDQVTHEISYSNDIDPEMSLDIFHPNSNLLTD 198
LI+ L IRK+ F +P++ PE D+VE +DQ+THEIS +IDPE++LDIF + N L +
Sbjct: 427 LIEGLFAIRKAKFEGYPAVRPELDLVEQEDQLTHEISLQEEIDPEITLDIFKSDPNFLEN 486
Query: 197 DEQYNFL 177
+++Y L
Sbjct: 487 EKRYEDL 493
>gb|ESW20227.1| hypothetical protein PHAVU_006G191000g [Phaseolus vulgaris]
Length = 649
Score = 69.3 bits (168), Expect = 5e-10
Identities = 31/67 (46%), Positives = 48/67 (71%)
Frame = -1
Query: 377 LIKCLLDIRKSDFLNFPSILPEFDIVELDDQVTHEISYSNDIDPEMSLDIFHPNSNLLTD 198
LI+ L IRK+ F +P++ PE D+VE +DQ+THE+S +ID E+S+DIF P+ N L +
Sbjct: 285 LIEGLFAIRKAKFQGYPAVRPELDLVEQEDQLTHEVSLDEEIDLEISIDIFKPDPNFLEN 344
Query: 197 DEQYNFL 177
+++Y L
Sbjct: 345 EKRYEEL 351
>ref|XP_006664468.1| PREDICTED: pre-mRNA-splicing factor CWC22 homolog, partial [Oryza
brachyantha]
Length = 747
Score = 68.9 bits (167), Expect = 6e-10
Identities = 32/67 (47%), Positives = 45/67 (67%)
Frame = -1
Query: 377 LIKCLLDIRKSDFLNFPSILPEFDIVELDDQVTHEISYSNDIDPEMSLDIFHPNSNLLTD 198
LI+ L IRK+ F FP+I PE D+VE +DQ THEIS +++DPE +L++F N N D
Sbjct: 389 LIEGLFAIRKAKFQGFPAIRPELDLVEQEDQFTHEISLEDELDPETNLNVFRANPNFAED 448
Query: 197 DEQYNFL 177
++ Y L
Sbjct: 449 EKAYENL 455
>ref|NP_001066507.1| Os12g0256300 [Oryza sativa Japonica Group]
gi|77554176|gb|ABA96972.1| Pre-mRNA splicing factor
cwc22, putative, expressed [Oryza sativa Japonica Group]
gi|113649014|dbj|BAF29526.1| Os12g0256300 [Oryza sativa
Japonica Group] gi|156622336|emb|CAO82941.1| putative
pre-mRNA-splicing factor cwc-22 [Oryza sativa Japonica
Group] gi|215707245|dbj|BAG93705.1| unnamed protein
product [Oryza sativa Japonica Group]
Length = 787
Score = 68.9 bits (167), Expect = 6e-10
Identities = 32/67 (47%), Positives = 45/67 (67%)
Frame = -1
Query: 377 LIKCLLDIRKSDFLNFPSILPEFDIVELDDQVTHEISYSNDIDPEMSLDIFHPNSNLLTD 198
LI+ L IRK+ F FP+I PE D+VE +DQ THEIS +++DPE +L++F N N D
Sbjct: 428 LIEGLFAIRKAKFQGFPAIRPELDLVEQEDQFTHEISLEDELDPETNLNVFRANPNFAED 487
Query: 197 DEQYNFL 177
++ Y L
Sbjct: 488 EKAYENL 494
>gb|EEE53027.1| hypothetical protein OsJ_35744 [Oryza sativa Japonica Group]
Length = 1003
Score = 68.9 bits (167), Expect = 6e-10
Identities = 32/67 (47%), Positives = 45/67 (67%)
Frame = -1
Query: 377 LIKCLLDIRKSDFLNFPSILPEFDIVELDDQVTHEISYSNDIDPEMSLDIFHPNSNLLTD 198
LI+ L IRK+ F FP+I PE D+VE +DQ THEIS +++DPE +L++F N N D
Sbjct: 428 LIEGLFAIRKAKFQGFPAIRPELDLVEQEDQFTHEISLEDELDPETNLNVFRANPNFAED 487
Query: 197 DEQYNFL 177
++ Y L
Sbjct: 488 EKAYENL 494