BLASTX nr result
ID: Catharanthus22_contig00034364
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus22_contig00034364
(475 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAB87099.1| putative retroelement pol polyprotein [Arabidopsi... 130 2e-39
gb|AAM98191.1| unknown protein [Arabidopsis thaliana] gi|3860380... 130 2e-39
gb|AAG51258.1|AC025782_3 Ty1/copia-element polyprotein [Arabidop... 127 6e-39
emb|CAN73272.1| hypothetical protein VITISV_013115 [Vitis vinifera] 126 1e-38
emb|CAN80919.1| hypothetical protein VITISV_002640 [Vitis vinifera] 126 1e-38
emb|CAN83015.1| hypothetical protein VITISV_041694 [Vitis vinifera] 127 3e-38
emb|CAN69804.1| hypothetical protein VITISV_017631 [Vitis vinifera] 126 4e-38
emb|CAN82171.1| hypothetical protein VITISV_040546 [Vitis vinifera] 125 4e-38
emb|CAN61658.1| hypothetical protein VITISV_040310 [Vitis vinifera] 124 6e-38
gb|AAG09097.1|AC009323_8 Putative retroelement polyprotein [Arab... 126 3e-37
gb|AAG50751.1|AC079733_19 polyprotein, putative [Arabidopsis tha... 123 3e-37
dbj|BAB10743.1| retroelement pol polyprotein-like [Arabidopsis t... 123 3e-37
emb|CAA18107.1| LTR retrotransposon like protein [Arabidopsis th... 123 3e-37
emb|CAN76645.1| hypothetical protein VITISV_004685 [Vitis vinifera] 121 7e-37
dbj|BAB10837.1| retroelement pol polyprotein-like [Arabidopsis t... 119 4e-36
emb|CAN82073.1| hypothetical protein VITISV_036538 [Vitis vinifera] 120 4e-36
gb|AAD24600.1| putative retroelement pol polyprotein [Arabidopsi... 124 1e-34
gb|ACB45081.1| putative polyprotein [Solanum habrochaites] 102 6e-33
emb|CAN65820.1| hypothetical protein VITISV_042324 [Vitis vinifera] 105 7e-33
emb|CAN64613.1| hypothetical protein VITISV_030850 [Vitis vinifera] 104 7e-33
>gb|AAB87099.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1496
Score = 130 bits (328), Expect(2) = 2e-39
Identities = 61/105 (58%), Positives = 78/105 (74%)
Frame = +1
Query: 157 LMVLGNN*IKGIDFTDTFVLVAKMVIFRALLFVSSTRNWPVHQMDVYNVFR*GDLMEEVY 336
L+V+GN+ +G+DF +TF VAK+ R +L V++ ++W VHQMDV+N F GDL EEVY
Sbjct: 1051 LVVMGNHQKEGVDFKETFAPVAKLTTVRTILAVAAAKDWEVHQMDVHNAFLHGDLEEEVY 1110
Query: 337 MRPPPGFSTISPGQVCRLQKSLYGLRQAPYCWLSKLTEALRKCGF 471
MR PPGF P +VCRL+KSLYGL+QAP CW SKL+ ALR GF
Sbjct: 1111 MRLPPGFKCSDPSKVCRLRKSLYGLKQAPRCWFSKLSTALRNIGF 1155
Score = 57.8 bits (138), Expect(2) = 2e-39
Identities = 26/51 (50%), Positives = 37/51 (72%)
Frame = +2
Query: 2 WRLAMKKEIYALKQNGSWTLTLLPTG*RALSIKWVYQIKYKVNGSIERYNA 154
W AM KEI AL+ N +W +T LP G +A+S KWVY++KY +G++ER+ A
Sbjct: 999 WCEAMSKEIDALEANHTWDITDLPHGKKAISSKWVYKLKYNSDGTLERHKA 1049
>gb|AAM98191.1| unknown protein [Arabidopsis thaliana] gi|38603804|gb|AAR24647.1|
At2g23330 [Arabidopsis thaliana]
gi|110742535|dbj|BAE99183.1| putative retroelement pol
polyprotein [Arabidopsis thaliana]
Length = 776
Score = 130 bits (328), Expect(2) = 2e-39
Identities = 61/105 (58%), Positives = 78/105 (74%)
Frame = +1
Query: 157 LMVLGNN*IKGIDFTDTFVLVAKMVIFRALLFVSSTRNWPVHQMDVYNVFR*GDLMEEVY 336
L+V+GN+ +G+DF +TF VAK+ R +L V++ ++W VHQMDV+N F GDL EEVY
Sbjct: 331 LVVMGNHQKEGVDFKETFAPVAKLTTVRTILAVAAAKDWEVHQMDVHNAFLHGDLEEEVY 390
Query: 337 MRPPPGFSTISPGQVCRLQKSLYGLRQAPYCWLSKLTEALRKCGF 471
MR PPGF P +VCRL+KSLYGL+QAP CW SKL+ ALR GF
Sbjct: 391 MRLPPGFKCSDPSKVCRLRKSLYGLKQAPRCWFSKLSTALRNIGF 435
Score = 57.8 bits (138), Expect(2) = 2e-39
Identities = 26/51 (50%), Positives = 37/51 (72%)
Frame = +2
Query: 2 WRLAMKKEIYALKQNGSWTLTLLPTG*RALSIKWVYQIKYKVNGSIERYNA 154
W AM KEI AL+ N +W +T LP G +A+S KWVY++KY +G++ER+ A
Sbjct: 279 WCEAMSKEIDALEANHTWDITDLPHGKKAISSKWVYKLKYNSDGTLERHKA 329
>gb|AAG51258.1|AC025782_3 Ty1/copia-element polyprotein [Arabidopsis thaliana]
Length = 1152
Score = 127 bits (320), Expect(2) = 6e-39
Identities = 60/113 (53%), Positives = 81/113 (71%), Gaps = 3/113 (2%)
Frame = +1
Query: 142 TIQRW---LMVLGNN*IKGIDFTDTFVLVAKMVIFRALLFVSSTRNWPVHQMDVYNVFR* 312
T++R+ L+ LGN+ +GIDFT TF V KM R LL V++ ++W +HQMDV+N F
Sbjct: 991 TVERYKARLVALGNHQKEGIDFTKTFAPVVKMQTVRLLLDVAAAKDWELHQMDVHNAFLH 1050
Query: 313 GDLMEEVYMRPPPGFSTISPGQVCRLQKSLYGLRQAPYCWLSKLTEALRKCGF 471
GDL E++YM+PPPGF T P VC+L+KS+YGL+QAP CW KL+ +L K GF
Sbjct: 1051 GDLKEDIYMKPPPGFKTTDPSLVCKLKKSIYGLKQAPRCWFEKLSTSLLKFGF 1103
Score = 58.9 bits (141), Expect(2) = 6e-39
Identities = 25/51 (49%), Positives = 36/51 (70%)
Frame = +2
Query: 2 WRLAMKKEIYALKQNGSWTLTLLPTG*RALSIKWVYQIKYKVNGSIERYNA 154
WR A+ E+ AL+ G+W +T LP G +A+ KWV++IKY NG++ERY A
Sbjct: 947 WRNAVFFEVDALEDQGTWDITKLPQGVKAIGSKWVFRIKYNSNGTVERYKA 997
>emb|CAN73272.1| hypothetical protein VITISV_013115 [Vitis vinifera]
Length = 1178
Score = 126 bits (317), Expect(2) = 1e-38
Identities = 61/105 (58%), Positives = 76/105 (72%)
Frame = +1
Query: 157 LMVLGNN*IKGIDFTDTFVLVAKMVIFRALLFVSSTRNWPVHQMDVYNVFR*GDLMEEVY 336
L+VLGN+ GID+ +TF VAKM RA L +++++NW +HQMDV+N F GDL EEVY
Sbjct: 733 LVVLGNHQEAGIDYHETFSPVAKMTTVRAFLAIAASKNWELHQMDVHNAFLHGDLEEEVY 792
Query: 337 MRPPPGFSTISPGQVCRLQKSLYGLRQAPYCWLSKLTEALRKCGF 471
M+ PPGF P VCRL+KSLYGL+QAP CW SKL AL+ GF
Sbjct: 793 MKLPPGFERSDPNLVCRLRKSLYGLKQAPRCWFSKLVTALKGYGF 837
Score = 59.3 bits (142), Expect(2) = 1e-38
Identities = 27/48 (56%), Positives = 35/48 (72%)
Frame = +2
Query: 2 WRLAMKKEIYALKQNGSWTLTLLPTG*RALSIKWVYQIKYKVNGSIER 145
W+ +M +EI AL++NG+WTL LP G RAL +WVY+ KY NG IER
Sbjct: 681 WQKSMHEEIRALEENGTWTLEPLPKGKRALGSQWVYRTKYFSNGDIER 728
>emb|CAN80919.1| hypothetical protein VITISV_002640 [Vitis vinifera]
Length = 1450
Score = 126 bits (316), Expect(2) = 1e-38
Identities = 60/105 (57%), Positives = 77/105 (73%)
Frame = +1
Query: 157 LMVLGNN*IKGIDFTDTFVLVAKMVIFRALLFVSSTRNWPVHQMDVYNVFR*GDLMEEVY 336
L+VLGN+ GID+ +TF VAKM RA L +++++NW +HQMDV+N F GDL EEVY
Sbjct: 1016 LVVLGNHQEAGIDYHETFSPVAKMTTVRAFLAIAASKNWELHQMDVHNAFLHGDLEEEVY 1075
Query: 337 MRPPPGFSTISPGQVCRLQKSLYGLRQAPYCWLSKLTEALRKCGF 471
M+ PPGF + P VCRL+KSLYGL+QAP CW +KL AL+ GF
Sbjct: 1076 MKLPPGFESSDPNLVCRLRKSLYGLKQAPRCWFAKLVTALKGYGF 1120
Score = 59.3 bits (142), Expect(2) = 1e-38
Identities = 27/48 (56%), Positives = 35/48 (72%)
Frame = +2
Query: 2 WRLAMKKEIYALKQNGSWTLTLLPTG*RALSIKWVYQIKYKVNGSIER 145
W+ +M +EI AL++NG+WTL LP G RAL +WVY+ KY NG IER
Sbjct: 964 WQKSMHEEIRALEENGTWTLEPLPKGKRALGSQWVYRTKYFSNGDIER 1011
>emb|CAN83015.1| hypothetical protein VITISV_041694 [Vitis vinifera]
Length = 1099
Score = 127 bits (319), Expect(2) = 3e-38
Identities = 61/105 (58%), Positives = 77/105 (73%)
Frame = +1
Query: 157 LMVLGNN*IKGIDFTDTFVLVAKMVIFRALLFVSSTRNWPVHQMDVYNVFR*GDLMEEVY 336
L+VLGN+ GID+ +TF VAKM + RA L +++++NW +HQMDV+N F GDL EEVY
Sbjct: 654 LVVLGNHQEAGIDYHETFSPVAKMTMVRAFLAIAASKNWELHQMDVHNAFLHGDLEEEVY 713
Query: 337 MRPPPGFSTISPGQVCRLQKSLYGLRQAPYCWLSKLTEALRKCGF 471
M+ PPGF P VCRL+KSLYGL+QAP CW SKL AL+ GF
Sbjct: 714 MKLPPGFERSDPNLVCRLRKSLYGLKQAPRCWFSKLVTALKGYGF 758
Score = 57.0 bits (136), Expect(2) = 3e-38
Identities = 26/48 (54%), Positives = 34/48 (70%)
Frame = +2
Query: 2 WRLAMKKEIYALKQNGSWTLTLLPTG*RALSIKWVYQIKYKVNGSIER 145
W+ +M +EI AL++NG+W L LP G RAL +WVY+ KY NG IER
Sbjct: 602 WQKSMHEEIRALEENGTWXLEPLPKGKRALGSQWVYRTKYFSNGDIER 649
>emb|CAN69804.1| hypothetical protein VITISV_017631 [Vitis vinifera]
Length = 1191
Score = 126 bits (317), Expect(2) = 4e-38
Identities = 60/105 (57%), Positives = 77/105 (73%)
Frame = +1
Query: 157 LMVLGNN*IKGIDFTDTFVLVAKMVIFRALLFVSSTRNWPVHQMDVYNVFR*GDLMEEVY 336
L+VLGN+ GID+ +TF VAKM RA L +++++NW +HQMDV+N F GDL EEVY
Sbjct: 728 LVVLGNHQEAGIDYHETFSPVAKMTTVRAFLAIAASKNWELHQMDVHNAFSHGDLEEEVY 787
Query: 337 MRPPPGFSTISPGQVCRLQKSLYGLRQAPYCWLSKLTEALRKCGF 471
M+ PPGF + P VCRL+KSLYGL+QAP CW +KL AL+ GF
Sbjct: 788 MKLPPGFESSDPNLVCRLRKSLYGLKQAPRCWFAKLVTALKGYGF 832
Score = 57.4 bits (137), Expect(2) = 4e-38
Identities = 26/48 (54%), Positives = 34/48 (70%)
Frame = +2
Query: 2 WRLAMKKEIYALKQNGSWTLTLLPTG*RALSIKWVYQIKYKVNGSIER 145
W+ +M +EI AL++NG+WTL LP G RAL +WVY+ KY N IER
Sbjct: 676 WQKSMHEEIRALEENGTWTLEXLPKGKRALGSQWVYRTKYFSNDDIER 723
>emb|CAN82171.1| hypothetical protein VITISV_040546 [Vitis vinifera]
Length = 1129
Score = 125 bits (313), Expect(2) = 4e-38
Identities = 60/105 (57%), Positives = 76/105 (72%)
Frame = +1
Query: 157 LMVLGNN*IKGIDFTDTFVLVAKMVIFRALLFVSSTRNWPVHQMDVYNVFR*GDLMEEVY 336
L+VLGN+ GID+ +TF VAKM RA L +++++NW +HQMDV+N F GDL EEVY
Sbjct: 684 LVVLGNHQEAGIDYHETFSPVAKMTTVRAFLAIAASKNWELHQMDVHNAFLHGDLEEEVY 743
Query: 337 MRPPPGFSTISPGQVCRLQKSLYGLRQAPYCWLSKLTEALRKCGF 471
M+ PPGF + P VCRL KSLYGL+QAP CW +KL AL+ GF
Sbjct: 744 MKLPPGFESSDPNLVCRLWKSLYGLKQAPRCWFAKLVTALKGYGF 788
Score = 58.9 bits (141), Expect(2) = 4e-38
Identities = 27/48 (56%), Positives = 34/48 (70%)
Frame = +2
Query: 2 WRLAMKKEIYALKQNGSWTLTLLPTG*RALSIKWVYQIKYKVNGSIER 145
W+ +M +EI AL++NG WTL LP G RAL +WVY+ KY NG IER
Sbjct: 632 WQKSMHEEIQALEENGMWTLEPLPKGKRALGSQWVYRTKYFSNGDIER 679
>emb|CAN61658.1| hypothetical protein VITISV_040310 [Vitis vinifera]
Length = 1461
Score = 124 bits (310), Expect(2) = 6e-38
Identities = 59/105 (56%), Positives = 75/105 (71%)
Frame = +1
Query: 157 LMVLGNN*IKGIDFTDTFVLVAKMVIFRALLFVSSTRNWPVHQMDVYNVFR*GDLMEEVY 336
L+VLGN+ GID+ +TF VAKM R L +++++NW +HQMDV+N F GDL EEVY
Sbjct: 1016 LVVLGNHQEAGIDYHETFSPVAKMTTVRTFLAIAASKNWELHQMDVHNAFLHGDLEEEVY 1075
Query: 337 MRPPPGFSTISPGQVCRLQKSLYGLRQAPYCWLSKLTEALRKCGF 471
M+ PPGF P VCRL+KSLYGL+QAP CW +KL AL+ GF
Sbjct: 1076 MKLPPGFERSDPNLVCRLRKSLYGLKQAPRCWFAKLVTALKGYGF 1120
Score = 59.3 bits (142), Expect(2) = 6e-38
Identities = 27/48 (56%), Positives = 35/48 (72%)
Frame = +2
Query: 2 WRLAMKKEIYALKQNGSWTLTLLPTG*RALSIKWVYQIKYKVNGSIER 145
W+ +M +EI AL++NG+WTL LP G RAL +WVY+ KY NG IER
Sbjct: 964 WQKSMHEEIRALEENGTWTLEPLPKGKRALGSQWVYRTKYFSNGDIER 1011
>gb|AAG09097.1|AC009323_8 Putative retroelement polyprotein [Arabidopsis thaliana]
Length = 1486
Score = 126 bits (317), Expect(2) = 3e-37
Identities = 63/105 (60%), Positives = 77/105 (73%)
Frame = +1
Query: 157 LMVLGNN*IKGIDFTDTFVLVAKMVIFRALLFVSSTRNWPVHQMDVYNVFR*GDLMEEVY 336
L+VLGNN +G+D+T+TF VAKMV RA L + +W VHQMDV+N F GDL EEVY
Sbjct: 1041 LVVLGNNQTEGLDYTETFAPVAKMVTVRAFLQQVVSLDWEVHQMDVHNAFLHGDLDEEVY 1100
Query: 337 MRPPPGFSTISPGQVCRLQKSLYGLRQAPYCWLSKLTEALRKCGF 471
M+ PPGF T +VCRL+KSLYGL+QAP CW +KLT AL+ GF
Sbjct: 1101 MQFPPGFRTGDKTKVCRLRKSLYGLKQAPRCWFAKLTSALKNYGF 1145
Score = 54.3 bits (129), Expect(2) = 3e-37
Identities = 23/51 (45%), Positives = 37/51 (72%)
Frame = +2
Query: 2 WRLAMKKEIYALKQNGSWTLTLLPTG*RALSIKWVYQIKYKVNGSIERYNA 154
W+ A+ EI +L+ G+WT+ LP G +AL KWV+++KYK +G++ER+ A
Sbjct: 989 WKGAVSHEIGSLENLGTWTVEDLPPGKKALGCKWVFRLKYKSDGTLERHKA 1039
>gb|AAG50751.1|AC079733_19 polyprotein, putative [Arabidopsis thaliana]
Length = 1468
Score = 123 bits (308), Expect(2) = 3e-37
Identities = 60/105 (57%), Positives = 75/105 (71%)
Frame = +1
Query: 157 LMVLGNN*IKGIDFTDTFVLVAKMVIFRALLFVSSTRNWPVHQMDVYNVFR*GDLMEEVY 336
L+VLGN +G+D+ +TF VAKM R L V++ R+W VHQMDV+N F GDL EEVY
Sbjct: 1023 LVVLGNCQKEGVDYDETFAPVAKMSTVRLFLGVAAARDWHVHQMDVHNAFLHGDLKEEVY 1082
Query: 337 MRPPPGFSTISPGQVCRLQKSLYGLRQAPYCWLSKLTEALRKCGF 471
M+ P GF P +VCRL KSLYGL+QAP CW SKL+ AL++ GF
Sbjct: 1083 MKLPQGFQCDDPSKVCRLHKSLYGLKQAPRCWFSKLSSALKQYGF 1127
Score = 57.8 bits (138), Expect(2) = 3e-37
Identities = 27/51 (52%), Positives = 37/51 (72%)
Frame = +2
Query: 2 WRLAMKKEIYALKQNGSWTLTLLPTG*RALSIKWVYQIKYKVNGSIERYNA 154
WR AM EI +L+ N ++++ LP G RAL KWVY+IKY+ +G+IERY A
Sbjct: 971 WREAMSAEIESLRVNQTFSIVNLPPGKRALGNKWVYKIKYRSDGAIERYKA 1021
>dbj|BAB10743.1| retroelement pol polyprotein-like [Arabidopsis thaliana]
Length = 1109
Score = 123 bits (308), Expect(2) = 3e-37
Identities = 60/105 (57%), Positives = 75/105 (71%)
Frame = +1
Query: 157 LMVLGNN*IKGIDFTDTFVLVAKMVIFRALLFVSSTRNWPVHQMDVYNVFR*GDLMEEVY 336
L+VLGN +G+D+ +TF VAKM R L V++ R+W VHQMDV+N F GDL EEVY
Sbjct: 664 LVVLGNCQKEGVDYDETFAPVAKMSTVRLFLGVAAARDWHVHQMDVHNAFLHGDLKEEVY 723
Query: 337 MRPPPGFSTISPGQVCRLQKSLYGLRQAPYCWLSKLTEALRKCGF 471
M+ P GF P +VCRL KSLYGL+QAP CW SKL+ AL++ GF
Sbjct: 724 MKLPQGFQCDDPSKVCRLHKSLYGLKQAPRCWFSKLSSALKQYGF 768
Score = 57.8 bits (138), Expect(2) = 3e-37
Identities = 27/51 (52%), Positives = 37/51 (72%)
Frame = +2
Query: 2 WRLAMKKEIYALKQNGSWTLTLLPTG*RALSIKWVYQIKYKVNGSIERYNA 154
WR AM EI +L+ N ++++ LP G RAL KWVY+IKY+ +G+IERY A
Sbjct: 612 WREAMSAEIESLRVNQTFSIVNLPPGKRALGNKWVYKIKYRSDGAIERYKA 662
>emb|CAA18107.1| LTR retrotransposon like protein [Arabidopsis thaliana]
gi|7269049|emb|CAB79159.1| LTR retrotransposon like
protein [Arabidopsis thaliana]
Length = 1109
Score = 123 bits (308), Expect(2) = 3e-37
Identities = 60/105 (57%), Positives = 75/105 (71%)
Frame = +1
Query: 157 LMVLGNN*IKGIDFTDTFVLVAKMVIFRALLFVSSTRNWPVHQMDVYNVFR*GDLMEEVY 336
L+VLGN +G+D+ +TF VAKM R L V++ R+W VHQMDV+N F GDL EEVY
Sbjct: 664 LVVLGNCQKEGVDYDETFAPVAKMSTVRLFLGVAAARDWHVHQMDVHNAFLHGDLKEEVY 723
Query: 337 MRPPPGFSTISPGQVCRLQKSLYGLRQAPYCWLSKLTEALRKCGF 471
M+ P GF P +VCRL KSLYGL+QAP CW SKL+ AL++ GF
Sbjct: 724 MKLPQGFQCDDPSKVCRLHKSLYGLKQAPRCWFSKLSSALKQYGF 768
Score = 57.8 bits (138), Expect(2) = 3e-37
Identities = 27/51 (52%), Positives = 37/51 (72%)
Frame = +2
Query: 2 WRLAMKKEIYALKQNGSWTLTLLPTG*RALSIKWVYQIKYKVNGSIERYNA 154
WR AM EI +L+ N ++++ LP G RAL KWVY+IKY+ +G+IERY A
Sbjct: 612 WREAMSAEIESLRVNQTFSIVNLPPGKRALGNKWVYKIKYRSDGAIERYKA 662
>emb|CAN76645.1| hypothetical protein VITISV_004685 [Vitis vinifera]
Length = 1196
Score = 121 bits (304), Expect(2) = 7e-37
Identities = 57/105 (54%), Positives = 75/105 (71%)
Frame = +1
Query: 157 LMVLGNN*IKGIDFTDTFVLVAKMVIFRALLFVSSTRNWPVHQMDVYNVFR*GDLMEEVY 336
L+VLGN+ ID+ +TF +AKM RA L +++++NW +HQMDV+N F GDL EEVY
Sbjct: 860 LVVLGNHQEADIDYHETFSPIAKMTTVRAFLAIAASKNWELHQMDVHNAFLHGDLEEEVY 919
Query: 337 MRPPPGFSTISPGQVCRLQKSLYGLRQAPYCWLSKLTEALRKCGF 471
M+ PPGF + P VCRL+KSLYGL+QAP CW +KL L+ GF
Sbjct: 920 MKLPPGFESXDPNLVCRLRKSLYGLKQAPRCWFAKLVTXLKGYGF 964
Score = 58.2 bits (139), Expect(2) = 7e-37
Identities = 27/48 (56%), Positives = 34/48 (70%)
Frame = +2
Query: 2 WRLAMKKEIYALKQNGSWTLTLLPTG*RALSIKWVYQIKYKVNGSIER 145
W+ +M +EI ALK+NG+WTL LP G AL +WVY+ KY NG IER
Sbjct: 808 WQKSMHEEIRALKENGTWTLEPLPNGKCALGSQWVYRTKYFSNGDIER 855
>dbj|BAB10837.1| retroelement pol polyprotein-like [Arabidopsis thaliana]
Length = 1462
Score = 119 bits (299), Expect(2) = 4e-36
Identities = 59/105 (56%), Positives = 76/105 (72%)
Frame = +1
Query: 157 LMVLGNN*IKGIDFTDTFVLVAKMVIFRALLFVSSTRNWPVHQMDVYNVFR*GDLMEEVY 336
L+VLGN +GID+++TF VAKMV RA L ++ +W VHQMDV+N F GDL EEVY
Sbjct: 1003 LVVLGNKQTEGIDYSETFAPVAKMVTVRAFLQQVASLDWEVHQMDVHNAFLHGDLDEEVY 1062
Query: 337 MRPPPGFSTISPGQVCRLQKSLYGLRQAPYCWLSKLTEALRKCGF 471
++ PPGF + +VCRL+K+LYGL+QAP CW +KLT AL GF
Sbjct: 1063 IKFPPGFGSDDNRKVCRLRKALYGLKQAPRCWFAKLTTALNDYGF 1107
Score = 57.4 bits (137), Expect(2) = 4e-36
Identities = 24/51 (47%), Positives = 37/51 (72%)
Frame = +2
Query: 2 WRLAMKKEIYALKQNGSWTLTLLPTG*RALSIKWVYQIKYKVNGSIERYNA 154
WR A+ EI +L+ G+WT+ LP G +AL KWV+++KYK +G++ER+ A
Sbjct: 951 WRCAVSDEIVSLENLGTWTVEDLPPGKKALGCKWVFRLKYKSDGTLERHKA 1001
>emb|CAN82073.1| hypothetical protein VITISV_036538 [Vitis vinifera]
Length = 1157
Score = 120 bits (301), Expect(2) = 4e-36
Identities = 56/106 (52%), Positives = 76/106 (71%)
Frame = +1
Query: 157 LMVLGNN*IKGIDFTDTFVLVAKMVIFRALLFVSSTRNWPVHQMDVYNVFR*GDLMEEVY 336
L++LGN ++GID+ +TF AKMV + L V + + W +HQMDV+N F G+L EEVY
Sbjct: 757 LVILGNKKVEGIDYNETFAPTAKMVTVQTFLAVVAMKGWELHQMDVHNAFLHGELDEEVY 816
Query: 337 MRPPPGFSTISPGQVCRLQKSLYGLRQAPYCWLSKLTEALRKCGFK 474
M+ PGF++ +PG+VC L+KSLYGL+QAP CW +KL AL GFK
Sbjct: 817 MQMSPGFASPTPGKVCGLRKSLYGLQQAPKCWFAKLVAALTSYGFK 862
Score = 56.6 bits (135), Expect(2) = 4e-36
Identities = 26/48 (54%), Positives = 34/48 (70%)
Frame = +2
Query: 2 WRLAMKKEIYALKQNGSWTLTLLPTG*RALSIKWVYQIKYKVNGSIER 145
WR AM+KEI AL+ N +W + LP +A+ KWVY+IKY +GSIER
Sbjct: 705 WREAMRKEIQALEDNETWIVENLPLEKKAIGSKWVYKIKYNSDGSIER 752
>gb|AAD24600.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1333
Score = 124 bits (311), Expect(2) = 1e-34
Identities = 59/106 (55%), Positives = 74/106 (69%)
Frame = +1
Query: 157 LMVLGNN*IKGIDFTDTFVLVAKMVIFRALLFVSSTRNWPVHQMDVYNVFR*GDLMEEVY 336
L+ LGN +G D+ +TF VAKM R L V+ RNW +HQMDV+N F GDL EEVY
Sbjct: 888 LVALGNKQKEGEDYGETFAPVAKMATVRLFLDVAVKRNWEIHQMDVHNAFLHGDLREEVY 947
Query: 337 MRPPPGFSTISPGQVCRLQKSLYGLRQAPYCWLSKLTEALRKCGFK 474
M+ PPGF P +VCRL+K+LYGL+QAP CW KLT AL++ GF+
Sbjct: 948 MKLPPGFEASHPNKVCRLRKALYGLKQAPRCWFEKLTTALKRYGFQ 993
Score = 47.8 bits (112), Expect(2) = 1e-34
Identities = 20/43 (46%), Positives = 31/43 (72%)
Frame = +2
Query: 26 IYALKQNGSWTLTLLPTG*RALSIKWVYQIKYKVNGSIERYNA 154
I A ++N +WT+ LP G RA+ +WVY++K+ +GS+ERY A
Sbjct: 844 IDAQEENHTWTIEDLPPGKRAIGSQWVYKVKHNSDGSVERYKA 886
>gb|ACB45081.1| putative polyprotein [Solanum habrochaites]
Length = 559
Score = 102 bits (253), Expect(2) = 6e-33
Identities = 54/108 (50%), Positives = 72/108 (66%), Gaps = 2/108 (1%)
Frame = +1
Query: 157 LMVLGNN*IKGIDFTDTFVLVAKMVIFRALLFVSSTRNWPVHQMDVYNVFR*GDLMEEVY 336
L+ G + +G+D+ DTF V KMV R +L +++++ W V QMDVYN F GDL+EEVY
Sbjct: 397 LVAKGYSQQEGLDYQDTFSPVVKMVTVRTVLTLAASKGWDVQQMDVYNAFLQGDLVEEVY 456
Query: 337 MRPPPGFSTISPGQ--VCRLQKSLYGLRQAPYCWLSKLTEALRKCGFK 474
M+ P GFS + G VC+L KSLYGL+QA W KLT+AL GF+
Sbjct: 457 MQIPQGFSHVHAGDQPVCKLLKSLYGLKQASRQWNVKLTQALLVAGFQ 504
Score = 64.7 bits (156), Expect(2) = 6e-33
Identities = 27/51 (52%), Positives = 37/51 (72%)
Frame = +2
Query: 2 WRLAMKKEIYALKQNGSWTLTLLPTG*RALSIKWVYQIKYKVNGSIERYNA 154
W AMK+EI AL++N +W + LP G +A+ KWVY+IKYK NG +ER+ A
Sbjct: 345 WIAAMKEEIQALEENKTWEVVTLPIGKKAIGCKWVYKIKYKANGEVERFKA 395
>emb|CAN65820.1| hypothetical protein VITISV_042324 [Vitis vinifera]
Length = 1262
Score = 105 bits (263), Expect(2) = 7e-33
Identities = 52/96 (54%), Positives = 69/96 (71%)
Frame = +1
Query: 184 KGIDFTDTFVLVAKMVIFRALLFVSSTRNWPVHQMDVYNVFR*GDLMEEVYMRPPPGFST 363
+G+DF DT+ VAKM R LL +++T+ W +HQ+DV N F DL E+VYM+ PPGFST
Sbjct: 995 EGLDFFDTYSPVAKMTTVRVLLAIAATKQWYLHQLDVNNAFLHEDLNEDVYMQLPPGFST 1054
Query: 364 ISPGQVCRLQKSLYGLRQAPYCWLSKLTEALRKCGF 471
+ +VC+L+KSLYGLRQA W SKL+ +L K GF
Sbjct: 1055 PNDPRVCKLKKSLYGLRQASRQWYSKLSSSLLKFGF 1090
Score = 60.5 bits (145), Expect(2) = 7e-33
Identities = 25/51 (49%), Positives = 34/51 (66%)
Frame = +2
Query: 2 WRLAMKKEIYALKQNGSWTLTLLPTG*RALSIKWVYQIKYKVNGSIERYNA 154
W+ AM EI AL+ N +W L +LP + KWVYQ+K+K +GS+ERY A
Sbjct: 934 WKTAMTDEIKALEHNKTWDLAILPPNKTTIGCKWVYQVKFKADGSVERYKA 984
>emb|CAN64613.1| hypothetical protein VITISV_030850 [Vitis vinifera]
Length = 598
Score = 104 bits (260), Expect(2) = 7e-33
Identities = 48/97 (49%), Positives = 70/97 (72%), Gaps = 1/97 (1%)
Frame = +1
Query: 187 GIDFTDTFVLVAKMVIFRALLFVSSTRNWPVHQMDVYNVFR*GDLMEEVYMRPPPGFSTI 366
GID+ +TF VAK+ R LL +++ +WP+HQ+DV N F GDL EE+YM PPG++T
Sbjct: 197 GIDYQETFSPVAKLKTVRVLLSLAANLDWPLHQLDVKNAFLHGDLEEEIYMDIPPGYTTT 256
Query: 367 SPGQV-CRLQKSLYGLRQAPYCWLSKLTEALRKCGFK 474
S ++ CRLQ++LYGL+Q+P W +L+ A+RK GF+
Sbjct: 257 SEAKIACRLQRALYGLKQSPRAWFGRLSSAMRKYGFQ 293
Score = 61.6 bits (148), Expect(2) = 7e-33
Identities = 24/51 (47%), Positives = 38/51 (74%)
Frame = +2
Query: 2 WRLAMKKEIYALKQNGSWTLTLLPTG*RALSIKWVYQIKYKVNGSIERYNA 154
W A+K+E+ AL++N +W L++LP G + + KW++ IKYK +GSI+RY A
Sbjct: 135 WAQAIKEELEALQKNNTWVLSVLPEGRKTVGCKWIFSIKYKADGSIDRYKA 185