BLASTX nr result

ID: Catharanthus22_contig00034322 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus22_contig00034322
         (274 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002529456.1| conserved hypothetical protein [Ricinus comm...    69   6e-10
ref|XP_002529116.1| conserved hypothetical protein [Ricinus comm...    59   7e-07
ref|XP_006374421.1| hypothetical protein POPTR_0015s07025g [Popu...    57   3e-06

>ref|XP_002529456.1| conserved hypothetical protein [Ricinus communis]
           gi|223531072|gb|EEF32922.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 67

 Score = 68.9 bits (167), Expect = 6e-10
 Identities = 34/47 (72%), Positives = 35/47 (74%)
 Frame = +3

Query: 3   DNYPLWGEQVLALAESQDLISHLTGETTDQAKDSTTPIPTYSTNNKT 143
           DNYPLW EQVLALAESQDLI HLT E  + A DSTT   T S NNKT
Sbjct: 19  DNYPLWREQVLALAESQDLIDHLTSEINNSATDSTTQTETTSMNNKT 65


>ref|XP_002529116.1| conserved hypothetical protein [Ricinus communis]
           gi|223531395|gb|EEF33229.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 92

 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 31/48 (64%), Positives = 35/48 (72%)
 Frame = +3

Query: 30  VLALAESQDLISHLTGETTDQAKDSTTPIPTYSTNNKTPE*RKSDRLL 173
           VLA  ESQDLI++LTGE  + A DSTT   T  TNNKT + RKSDRLL
Sbjct: 8   VLAFTESQDLINYLTGEINNSATDSTTQTETTLTNNKTADWRKSDRLL 55


>ref|XP_006374421.1| hypothetical protein POPTR_0015s07025g [Populus trichocarpa]
           gi|550322183|gb|ERP52218.1| hypothetical protein
           POPTR_0015s07025g [Populus trichocarpa]
          Length = 204

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 33/63 (52%), Positives = 37/63 (58%), Gaps = 7/63 (11%)
 Frame = +3

Query: 6   NYPLWGEQVLALAESQDLISHLTGETTDQAKDSTTPIPTYSTNNKTPE-------*RKSD 164
           NYP W EQVL LAESQDL+ HLT ET  Q K +     T  T N TP+        +KSD
Sbjct: 20  NYPPWREQVLGLAESQDLVDHLTRETPIQTKYTIPDSNTTKTRNTTPQVTREFIAWQKSD 79

Query: 165 RLL 173
           RLL
Sbjct: 80  RLL 82


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