BLASTX nr result
ID: Catharanthus22_contig00034136
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus22_contig00034136
(356 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAD41912.2| OSJNBa0033G05.13 [Oryza sativa Japonica Group] 92 7e-17
gb|AAM91886.1| putative polyprotein [Oryza sativa Japonica Group] 91 2e-16
gb|AAP54315.2| retrotransposon protein, putative, Ty1-copia subc... 91 2e-16
emb|CAJ86192.1| H0306F03.15 [Oryza sativa Indica Group] 91 2e-16
emb|CAJ86151.1| H0413E07.4 [Oryza sativa Indica Group] 91 2e-16
emb|CAB40039.1| putative retrotransposon [Arabidopsis thaliana] ... 91 2e-16
emb|CAN65222.1| hypothetical protein VITISV_038665 [Vitis vinifera] 90 3e-16
emb|CAN61272.1| hypothetical protein VITISV_039063 [Vitis vinifera] 90 3e-16
emb|CAJ09951.2| putative gag-pol polyprotein [Citrus sinensis] 90 3e-16
gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-... 90 4e-16
ref|NP_001065797.2| Os11g0157000 [Oryza sativa Japonica Group] g... 90 4e-16
ref|NP_001172143.1| Os01g0116166 [Oryza sativa Japonica Group] g... 90 4e-16
gb|AAM08562.1|AC092749_15 Putative retroelement [Oryza sativa Ja... 89 6e-16
ref|XP_006651032.1| PREDICTED: uncharacterized protein LOC102707... 89 8e-16
gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group] 88 1e-15
gb|AAF19226.1|AC007505_2 Highly similar to Ta1-3 polyprotein [Ar... 88 1e-15
gb|ABA98804.1| retrotransposon protein, putative, Ty1-copia subc... 88 1e-15
gb|ABA98656.1| retrotransposon protein, putative, Ty1-copia subc... 88 1e-15
gb|AAX92861.1| retrotransposon protein, putative, Ty1-copia sub-... 88 1e-15
emb|CAN72567.1| hypothetical protein VITISV_044177 [Vitis vinifera] 88 1e-15
>emb|CAD41912.2| OSJNBa0033G05.13 [Oryza sativa Japonica Group]
Length = 1181
Score = 92.0 bits (227), Expect = 7e-17
Identities = 50/96 (52%), Positives = 57/96 (59%)
Frame = +1
Query: 67 WKLFAENQTGNKLKFIRTDNGLEFCNKKFNDLHASHGIMHHTTVRHNPQQNSVSERMNRI 246
WK E QT K+K +RTDNG+EFC+K F S GI+ H TV H PQQN V+ERMNRI
Sbjct: 543 WKTMVERQTERKVKILRTDNGMEFCSKIFKSYCKSEGIVRHYTVPHTPQQNGVAERMNRI 602
Query: 247 IIDKLGVSWYFLAFLNLFSGEAISSTIVYLINRSAS 354
II K F EA+ ST YLINRS S
Sbjct: 603 IISKARCMLSNAGLPKQFWAEAV-STACYLINRSPS 637
>gb|AAM91886.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1280
Score = 90.9 bits (224), Expect = 2e-16
Identities = 49/96 (51%), Positives = 57/96 (59%)
Frame = +1
Query: 67 WKLFAENQTGNKLKFIRTDNGLEFCNKKFNDLHASHGIMHHTTVRHNPQQNSVSERMNRI 246
WK E QT K+K +RTDNG+EFC+K F S GI+HH TV H PQQN V+ERMN
Sbjct: 578 WKTMVERQTEKKVKILRTDNGMEFCSKIFKSYCKSEGIVHHYTVPHTPQQNGVAERMNMA 637
Query: 247 IIDKLGVSWYFLAFLNLFSGEAISSTIVYLINRSAS 354
II K F EA+S+T YLINRS S
Sbjct: 638 IISKARCMLSNADLPKQFWAEAVSTT-CYLINRSPS 672
>gb|AAP54315.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1312
Score = 90.9 bits (224), Expect = 2e-16
Identities = 49/96 (51%), Positives = 57/96 (59%)
Frame = +1
Query: 67 WKLFAENQTGNKLKFIRTDNGLEFCNKKFNDLHASHGIMHHTTVRHNPQQNSVSERMNRI 246
WK E QT K+K +RTDNG+EFC+K F S GI+HH TV H PQQN V+ERMN
Sbjct: 578 WKTMVERQTEKKVKILRTDNGMEFCSKIFKSYCKSEGIVHHYTVPHTPQQNGVAERMNMA 637
Query: 247 IIDKLGVSWYFLAFLNLFSGEAISSTIVYLINRSAS 354
II K F EA+S+T YLINRS S
Sbjct: 638 IISKARCMLSNADLPKQFWAEAVSTT-CYLINRSPS 672
>emb|CAJ86192.1| H0306F03.15 [Oryza sativa Indica Group]
Length = 1037
Score = 90.5 bits (223), Expect = 2e-16
Identities = 49/94 (52%), Positives = 55/94 (58%)
Frame = +1
Query: 67 WKLFAENQTGNKLKFIRTDNGLEFCNKKFNDLHASHGIMHHTTVRHNPQQNSVSERMNRI 246
WK E QT K+K +RTDNG+EFC+K F S GIM H TV H PQQN V+ERMNR
Sbjct: 360 WKTMVERQTERKVKILRTDNGMEFCSKIFKSYCKSEGIMRHYTVPHTPQQNGVAERMNRT 419
Query: 247 IIDKLGVSWYFLAFLNLFSGEAISSTIVYLINRS 348
II K F EA+ ST YLINRS
Sbjct: 420 IISKARCMLSNAGLPKQFWAEAV-STACYLINRS 452
>emb|CAJ86151.1| H0413E07.4 [Oryza sativa Indica Group]
Length = 1205
Score = 90.5 bits (223), Expect = 2e-16
Identities = 49/94 (52%), Positives = 55/94 (58%)
Frame = +1
Query: 67 WKLFAENQTGNKLKFIRTDNGLEFCNKKFNDLHASHGIMHHTTVRHNPQQNSVSERMNRI 246
WK E QT K+K +RTDNG+EFC+K F S GIM H TV H PQQN V+ERMNR
Sbjct: 528 WKTMVERQTERKVKILRTDNGMEFCSKIFKSYCKSEGIMRHYTVPHTPQQNGVAERMNRT 587
Query: 247 IIDKLGVSWYFLAFLNLFSGEAISSTIVYLINRS 348
II K F EA+ ST YLINRS
Sbjct: 588 IISKARCMLSNAGLPKQFWAEAV-STACYLINRS 620
>emb|CAB40039.1| putative retrotransposon [Arabidopsis thaliana]
gi|7267743|emb|CAB78169.1| putative retrotransposon
[Arabidopsis thaliana]
Length = 1230
Score = 90.5 bits (223), Expect = 2e-16
Identities = 44/96 (45%), Positives = 61/96 (63%)
Frame = +1
Query: 67 WKLFAENQTGNKLKFIRTDNGLEFCNKKFNDLHASHGIMHHTTVRHNPQQNSVSERMNRI 246
W + ENQTG K+K +R DNGLEFCN++FND GI+ H T + PQQN V+ERMN
Sbjct: 533 WSVMVENQTGRKIKILRIDNGLEFCNQQFNDFCKEKGIVRHQTCAYTPQQNGVAERMNHT 592
Query: 247 IIDKLGVSWYFLAFLNLFSGEAISSTIVYLINRSAS 354
I++K+ + F EA ++T+V LIN++ S
Sbjct: 593 IMEKVRRMLSYSGLPKTFWAEA-TNTVVTLINKTPS 627
>emb|CAN65222.1| hypothetical protein VITISV_038665 [Vitis vinifera]
Length = 1562
Score = 90.1 bits (222), Expect = 3e-16
Identities = 44/96 (45%), Positives = 58/96 (60%)
Frame = +1
Query: 67 WKLFAENQTGNKLKFIRTDNGLEFCNKKFNDLHASHGIMHHTTVRHNPQQNSVSERMNRI 246
WK E +TG +K +RTDNGLEFCNK F++ GI+ H TVRH PQQN V+ERMN+
Sbjct: 642 WKTMVEKRTGKVVKTLRTDNGLEFCNKDFDEFCRKEGIVRHRTVRHTPQQNGVAERMNQT 701
Query: 247 IIDKLGVSWYFLAFLNLFSGEAISSTIVYLINRSAS 354
++ + F EA+ +T YL+NRS S
Sbjct: 702 LVQRARCMRIDAGLSKKFWAEAV-NTAAYLVNRSPS 736
>emb|CAN61272.1| hypothetical protein VITISV_039063 [Vitis vinifera]
Length = 1643
Score = 90.1 bits (222), Expect = 3e-16
Identities = 44/96 (45%), Positives = 58/96 (60%)
Frame = +1
Query: 67 WKLFAENQTGNKLKFIRTDNGLEFCNKKFNDLHASHGIMHHTTVRHNPQQNSVSERMNRI 246
WK E +TG +K +RTDNGLEFCNK F++ GI+ H TVRH PQQN V+ERMN+
Sbjct: 855 WKTMVEKRTGKVVKTLRTDNGLEFCNKDFDEFCRKEGIVRHRTVRHTPQQNGVAERMNQT 914
Query: 247 IIDKLGVSWYFLAFLNLFSGEAISSTIVYLINRSAS 354
++ + F EA+ +T YL+NRS S
Sbjct: 915 LVQRARCMRIDAGLSKKFWAEAV-NTAAYLVNRSPS 949
>emb|CAJ09951.2| putative gag-pol polyprotein [Citrus sinensis]
Length = 1334
Score = 90.1 bits (222), Expect = 3e-16
Identities = 47/96 (48%), Positives = 58/96 (60%)
Frame = +1
Query: 67 WKLFAENQTGNKLKFIRTDNGLEFCNKKFNDLHASHGIMHHTTVRHNPQQNSVSERMNRI 246
WK ENQ+ KLK +RTDNGLEFC+K F + HGI H TVR PQQN ++ERMNR
Sbjct: 533 WKSLVENQSDFKLKCLRTDNGLEFCSKVFEEYCQKHGIKRHKTVRFTPQQNGLAERMNRT 592
Query: 247 IIDKLGVSWYFLAFLNLFSGEAISSTIVYLINRSAS 354
++DK F EA+ +T YL+NRS S
Sbjct: 593 LVDKTRCMLINSKLPRSFWAEAV-NTASYLVNRSPS 627
>gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
Japonica Group] gi|77548751|gb|ABA91548.1|
retrotransposon protein, putative, Ty1-copia subclass
[Oryza sativa Japonica Group]
Length = 2340
Score = 89.7 bits (221), Expect = 4e-16
Identities = 49/96 (51%), Positives = 56/96 (58%)
Frame = +1
Query: 67 WKLFAENQTGNKLKFIRTDNGLEFCNKKFNDLHASHGIMHHTTVRHNPQQNSVSERMNRI 246
WK E QT K+K +RTDNG+EFC+K F S GI+ H TV H PQQN V+ERMNR
Sbjct: 750 WKTMVERQTERKVKILRTDNGMEFCSKIFKSYCKSEGIVRHYTVPHTPQQNGVAERMNRT 809
Query: 247 IIDKLGVSWYFLAFLNLFSGEAISSTIVYLINRSAS 354
II K F EA+ ST YLINRS S
Sbjct: 810 IISKARCLLSNAGLPKQFWAEAV-STACYLINRSPS 844
>ref|NP_001065797.2| Os11g0157000 [Oryza sativa Japonica Group]
gi|255679807|dbj|BAF27642.2| Os11g0157000 [Oryza sativa
Japonica Group]
Length = 1601
Score = 89.7 bits (221), Expect = 4e-16
Identities = 49/96 (51%), Positives = 56/96 (58%)
Frame = +1
Query: 67 WKLFAENQTGNKLKFIRTDNGLEFCNKKFNDLHASHGIMHHTTVRHNPQQNSVSERMNRI 246
WK E QT K+K +RTDNG+EFC+K F S GI+ H TV H PQQN V+ERMNR
Sbjct: 543 WKTMVERQTERKVKILRTDNGMEFCSKIFKSYCKSEGIVRHYTVPHTPQQNGVAERMNRT 602
Query: 247 IIDKLGVSWYFLAFLNLFSGEAISSTIVYLINRSAS 354
II K F EA+ ST YLINRS S
Sbjct: 603 IISKARCLLSNAGLPKQFWAEAV-STACYLINRSPS 637
>ref|NP_001172143.1| Os01g0116166 [Oryza sativa Japonica Group]
gi|255672802|dbj|BAH90873.1| Os01g0116166 [Oryza sativa
Japonica Group]
Length = 778
Score = 89.7 bits (221), Expect = 4e-16
Identities = 48/96 (50%), Positives = 56/96 (58%)
Frame = +1
Query: 67 WKLFAENQTGNKLKFIRTDNGLEFCNKKFNDLHASHGIMHHTTVRHNPQQNSVSERMNRI 246
WK E QT K+K +RTDNG+EFC+K F S GI+ H T+ H PQQN V+ERMNR
Sbjct: 509 WKTMVERQTERKVKILRTDNGMEFCSKIFKSYCKSEGIVRHYTIPHTPQQNGVAERMNRT 568
Query: 247 IIDKLGVSWYFLAFLNLFSGEAISSTIVYLINRSAS 354
II K F EA+ ST YLINRS S
Sbjct: 569 IISKARCMLSNAGLPKQFWAEAV-STACYLINRSPS 603
>gb|AAM08562.1|AC092749_15 Putative retroelement [Oryza sativa Japonica Group]
gi|20087076|gb|AAM10749.1|AC112514_2 Putative
retroelement [Oryza sativa Japonica Group]
Length = 1225
Score = 89.0 bits (219), Expect = 6e-16
Identities = 48/96 (50%), Positives = 56/96 (58%)
Frame = +1
Query: 67 WKLFAENQTGNKLKFIRTDNGLEFCNKKFNDLHASHGIMHHTTVRHNPQQNSVSERMNRI 246
WK E QT K+K +RTDNG++FC+K F S GI+ H TV H PQQN V+ERMNR
Sbjct: 504 WKTMVERQTERKVKILRTDNGMDFCSKIFKSYCKSEGIVRHYTVPHTPQQNGVAERMNRT 563
Query: 247 IIDKLGVSWYFLAFLNLFSGEAISSTIVYLINRSAS 354
II K F EA+ ST YLINRS S
Sbjct: 564 IISKARCMLSNAGLPKQFWAEAV-STACYLINRSPS 598
>ref|XP_006651032.1| PREDICTED: uncharacterized protein LOC102707106 [Oryza brachyantha]
Length = 1773
Score = 88.6 bits (218), Expect = 8e-16
Identities = 48/96 (50%), Positives = 56/96 (58%)
Frame = +1
Query: 67 WKLFAENQTGNKLKFIRTDNGLEFCNKKFNDLHASHGIMHHTTVRHNPQQNSVSERMNRI 246
WK E QT K+K +RTDNG+EFC+++F S GI+ H TV H PQQN V ERMNR
Sbjct: 482 WKTMVERQTERKVKVLRTDNGMEFCSRQFKSYCRSEGIVRHYTVSHTPQQNGVVERMNRT 541
Query: 247 IIDKLGVSWYFLAFLNLFSGEAISSTIVYLINRSAS 354
II K F EA +ST YLINRS S
Sbjct: 542 IISKARCMLSNAGLPRRFWAEA-ASTACYLINRSPS 576
>gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1241
Score = 88.2 bits (217), Expect = 1e-15
Identities = 48/96 (50%), Positives = 56/96 (58%)
Frame = +1
Query: 67 WKLFAENQTGNKLKFIRTDNGLEFCNKKFNDLHASHGIMHHTTVRHNPQQNSVSERMNRI 246
WK E QT K+K +RTDNG+E C+K F S GI+ H TV H PQQN V+ERMNR
Sbjct: 452 WKTMVERQTERKVKILRTDNGMELCSKIFKSYCKSEGIVRHYTVPHTPQQNGVAERMNRT 511
Query: 247 IIDKLGVSWYFLAFLNLFSGEAISSTIVYLINRSAS 354
II K + F EA+ ST YLINRS S
Sbjct: 512 IISKARCMLSNASLPKQFWAEAV-STACYLINRSPS 546
>gb|AAF19226.1|AC007505_2 Highly similar to Ta1-3 polyprotein [Arabidopsis thaliana]
Length = 1356
Score = 87.8 bits (216), Expect = 1e-15
Identities = 45/94 (47%), Positives = 57/94 (60%)
Frame = +1
Query: 67 WKLFAENQTGNKLKFIRTDNGLEFCNKKFNDLHASHGIMHHTTVRHNPQQNSVSERMNRI 246
WK ENQ K+K +RTDNGLEFCN +F+ HGI H T + PQQN V+ERMNR
Sbjct: 548 WKSLVENQVNKKVKCLRTDNGLEFCNSRFDSYCKEHGIERHRTCTYTPQQNGVAERMNRT 607
Query: 247 IIDKLGVSWYFLAFLNLFSGEAISSTIVYLINRS 348
I++K+ +F EA ++T YLINRS
Sbjct: 608 IMEKVRCLLNKSGVEEVFWAEA-AATAAYLINRS 640
>gb|ABA98804.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1333
Score = 87.8 bits (216), Expect = 1e-15
Identities = 47/96 (48%), Positives = 56/96 (58%)
Frame = +1
Query: 67 WKLFAENQTGNKLKFIRTDNGLEFCNKKFNDLHASHGIMHHTTVRHNPQQNSVSERMNRI 246
WK+ E QT K+K +RTDNG EFC+ FND GI+ H T+ H PQQN V+ERMNR
Sbjct: 535 WKVMIERQTERKVKLLRTDNGGEFCSHAFNDYCRQEGIVRHHTIPHTPQQNGVAERMNRT 594
Query: 247 IIDKLGVSWYFLAFLNLFSGEAISSTIVYLINRSAS 354
II + F EA +ST YLINRS S
Sbjct: 595 IISRARCMLSHARMNKRFWAEA-ASTACYLINRSPS 629
>gb|ABA98656.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1333
Score = 87.8 bits (216), Expect = 1e-15
Identities = 47/96 (48%), Positives = 56/96 (58%)
Frame = +1
Query: 67 WKLFAENQTGNKLKFIRTDNGLEFCNKKFNDLHASHGIMHHTTVRHNPQQNSVSERMNRI 246
WK+ E QT K+K +RTDNG EFC+ FND GI+ H T+ H PQQN V+ERMNR
Sbjct: 535 WKVMIERQTERKVKLLRTDNGGEFCSHAFNDYCRQEGIVRHHTIPHTPQQNGVAERMNRT 594
Query: 247 IIDKLGVSWYFLAFLNLFSGEAISSTIVYLINRSAS 354
II + F EA +ST YLINRS S
Sbjct: 595 IISRARCMLSHARMNKRFWAEA-ASTACYLINRSPS 629
>gb|AAX92861.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza
sativa Japonica Group] gi|77549942|gb|ABA92739.1|
retrotransposon protein, putative, Ty1-copia subclass
[Oryza sativa Japonica Group]
Length = 1373
Score = 87.8 bits (216), Expect = 1e-15
Identities = 47/96 (48%), Positives = 56/96 (58%)
Frame = +1
Query: 67 WKLFAENQTGNKLKFIRTDNGLEFCNKKFNDLHASHGIMHHTTVRHNPQQNSVSERMNRI 246
WK+ E QT K+K +RTDNG EFC+ FND GI+ H T+ H PQQN V+ERMNR
Sbjct: 535 WKVMIERQTERKVKLLRTDNGGEFCSHAFNDYCRQEGIVRHHTIPHTPQQNGVAERMNRT 594
Query: 247 IIDKLGVSWYFLAFLNLFSGEAISSTIVYLINRSAS 354
II + F EA +ST YLINRS S
Sbjct: 595 IISRARCMLSHARMNKRFWAEA-ASTACYLINRSPS 629
>emb|CAN72567.1| hypothetical protein VITISV_044177 [Vitis vinifera]
Length = 950
Score = 87.8 bits (216), Expect = 1e-15
Identities = 43/96 (44%), Positives = 57/96 (59%)
Frame = +1
Query: 67 WKLFAENQTGNKLKFIRTDNGLEFCNKKFNDLHASHGIMHHTTVRHNPQQNSVSERMNRI 246
WK E +TG +K +RTDNGLEFCNK F++ GI+ H TVRH PQQN V+ERMN+
Sbjct: 497 WKTMVEKRTGKVVKTLRTDNGLEFCNKDFDEFCRKEGIVRHRTVRHTPQQNGVAERMNQT 556
Query: 247 IIDKLGVSWYFLAFLNLFSGEAISSTIVYLINRSAS 354
++ + F EA+ +T YL+N S S
Sbjct: 557 LVQRARCMRIDAGLSKKFWAEAV-NTAAYLVNXSPS 591