BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus22_contig00033890
         (271 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004236339.1| PREDICTED: putative pentatricopeptide repeat...   137   1e-30
ref|XP_006447959.1| hypothetical protein CICLE_v10014595mg [Citr...   121   8e-26
ref|XP_006469338.1| PREDICTED: putative pentatricopeptide repeat...   121   1e-25
gb|EXB61171.1| hypothetical protein L484_007437 [Morus notabilis]     119   4e-25
ref|XP_002303023.2| pentatricopeptide repeat-containing family p...   119   5e-25
ref|XP_003635033.1| PREDICTED: putative pentatricopeptide repeat...   115   8e-24
emb|CBI38389.3| unnamed protein product [Vitis vinifera]              115   8e-24
ref|XP_003635064.1| PREDICTED: putative pentatricopeptide repeat...   114   1e-23
emb|CBI18728.3| unnamed protein product [Vitis vinifera]              114   1e-23
gb|EOX93714.1| Tetratricopeptide repeat-like superfamily protein...   112   7e-23
ref|XP_002527276.1| pentatricopeptide repeat-containing protein,...   108   6e-22
ref|XP_003540936.1| PREDICTED: putative pentatricopeptide repeat...   105   5e-21
ref|XP_004292328.1| PREDICTED: putative pentatricopeptide repeat...   103   2e-20
gb|ESW23889.1| hypothetical protein PHAVU_004G084900g [Phaseolus...   103   3e-20
ref|XP_006401000.1| hypothetical protein EUTSA_v10015737mg [Eutr...    99   8e-19
ref|XP_002864611.1| hypothetical protein ARALYDRAFT_496037 [Arab...    97   2e-18
ref|NP_200728.2| protein ORGANELLE TRANSCRIPT PROCESSING 80 [Ara...    96   5e-18
ref|XP_002867972.1| pentatricopeptide repeat-containing protein ...    93   4e-17
ref|XP_003550993.1| PREDICTED: pentatricopeptide repeat-containi...    92   7e-17
ref|XP_006282116.1| hypothetical protein CARUB_v10028364mg [Caps...    92   9e-17

>ref|XP_004236339.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g59200, chloroplastic-like [Solanum lycopersicum]
          Length = 630

 Score =  137 bits (346), Expect = 1e-30
 Identities = 62/89 (69%), Positives = 79/89 (88%)
 Frame = -1

Query: 271 SYVNKYDIEINHLVGSALINMYSRCGNIDEAEKIFCSLQQRDVTTYNSLIVGFSLNGKSV 92
           SYV KY+IE+NH+VGSAL+NMYSRCG+IDEA  +F  L+ RDVTTYNS+IVG++LNGKS+
Sbjct: 282 SYVEKYNIEVNHIVGSALVNMYSRCGDIDEAASLFEELKARDVTTYNSMIVGYALNGKSI 341

Query: 91  EAVQIFQRMVSGGIKPTNITFTAVLNACS 5
           EA+++FQRM   G+KPT+ITF+ VLNACS
Sbjct: 342 EAIKVFQRMKREGVKPTSITFSGVLNACS 370


>ref|XP_006447959.1| hypothetical protein CICLE_v10014595mg [Citrus clementina]
           gi|557550570|gb|ESR61199.1| hypothetical protein
           CICLE_v10014595mg [Citrus clementina]
          Length = 631

 Score =  121 bits (304), Expect = 8e-26
 Identities = 52/89 (58%), Positives = 76/89 (85%)
 Frame = -1

Query: 271 SYVNKYDIEINHLVGSALINMYSRCGNIDEAEKIFCSLQQRDVTTYNSLIVGFSLNGKSV 92
           SY+ K+ I++NH+VG ALINMYSRCG+ID+A ++F  +++RDVTTYNSLI G +++G+S+
Sbjct: 283 SYMGKHRIDLNHIVGGALINMYSRCGDIDKALRVFEEMKERDVTTYNSLIAGLAMHGRSI 342

Query: 91  EAVQIFQRMVSGGIKPTNITFTAVLNACS 5
           EAV++F+ M++ GI+PT +TF  VLNACS
Sbjct: 343 EAVEMFREMINQGIRPTKVTFVGVLNACS 371


>ref|XP_006469338.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g59200, chloroplastic-like [Citrus sinensis]
          Length = 631

 Score =  121 bits (303), Expect = 1e-25
 Identities = 52/89 (58%), Positives = 76/89 (85%)
 Frame = -1

Query: 271 SYVNKYDIEINHLVGSALINMYSRCGNIDEAEKIFCSLQQRDVTTYNSLIVGFSLNGKSV 92
           SY+ K+ I++NH+VG ALINMYSRCG+ID+A ++F  +++RDVTTYNSLI G +++G+S+
Sbjct: 283 SYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSI 342

Query: 91  EAVQIFQRMVSGGIKPTNITFTAVLNACS 5
           EAV++F+ M++ GI+PT +TF  VLNACS
Sbjct: 343 EAVEMFREMINQGIRPTKVTFVGVLNACS 371


>gb|EXB61171.1| hypothetical protein L484_007437 [Morus notabilis]
          Length = 631

 Score =  119 bits (298), Expect = 4e-25
 Identities = 48/89 (53%), Positives = 74/89 (83%)
 Frame = -1

Query: 271 SYVNKYDIEINHLVGSALINMYSRCGNIDEAEKIFCSLQQRDVTTYNSLIVGFSLNGKSV 92
           SY+ KY+I++NH+VG ALINMY+RCG+ID+ +K+F  + +RD++TYNS+I G  ++GKS+
Sbjct: 282 SYMGKYEIKLNHIVGGALINMYARCGDIDKVKKVFDEMNERDISTYNSIIAGLGMHGKSI 341

Query: 91  EAVQIFQRMVSGGIKPTNITFTAVLNACS 5
           EA+++F+ M++ G +P +ITF  VLNACS
Sbjct: 342 EAIEMFRAMLNNGFRPNSITFVGVLNACS 370


>ref|XP_002303023.2| pentatricopeptide repeat-containing family protein [Populus
           trichocarpa] gi|550345712|gb|EEE82296.2|
           pentatricopeptide repeat-containing family protein
           [Populus trichocarpa]
          Length = 621

 Score =  119 bits (297), Expect = 5e-25
 Identities = 51/89 (57%), Positives = 76/89 (85%)
 Frame = -1

Query: 271 SYVNKYDIEINHLVGSALINMYSRCGNIDEAEKIFCSLQQRDVTTYNSLIVGFSLNGKSV 92
           SY++K+ IE+NH VG ALINMYSRCG+IDEA+++F  +++++V TYNS+I+GF+L+GKSV
Sbjct: 273 SYMDKHRIELNHFVGGALINMYSRCGDIDEAQRVFEQMKEKNVITYNSMIMGFALHGKSV 332

Query: 91  EAVQIFQRMVSGGIKPTNITFTAVLNACS 5
           EAV++F+ ++  G  P+++TF  VLNACS
Sbjct: 333 EAVELFRGLIKQGFTPSSVTFVGVLNACS 361


>ref|XP_003635033.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g59200, chloroplastic-like [Vitis vinifera]
          Length = 650

 Score =  115 bits (287), Expect = 8e-24
 Identities = 51/89 (57%), Positives = 72/89 (80%)
 Frame = -1

Query: 271 SYVNKYDIEINHLVGSALINMYSRCGNIDEAEKIFCSLQQRDVTTYNSLIVGFSLNGKSV 92
           SY+ K++IE+N  VG+ALINMYSRCG+IDEA+ +F  ++ RDV TYN++I G S+NGKS 
Sbjct: 302 SYMRKFEIELNLFVGNALINMYSRCGSIDEAQTVFDEMKDRDVITYNTMISGLSMNGKSR 361

Query: 91  EAVQIFQRMVSGGIKPTNITFTAVLNACS 5
           +A+++F+ MV   ++PTN+TF  VLNACS
Sbjct: 362 QAIELFRVMVGRRLRPTNVTFVGVLNACS 390


>emb|CBI38389.3| unnamed protein product [Vitis vinifera]
          Length = 614

 Score =  115 bits (287), Expect = 8e-24
 Identities = 51/89 (57%), Positives = 72/89 (80%)
 Frame = -1

Query: 271 SYVNKYDIEINHLVGSALINMYSRCGNIDEAEKIFCSLQQRDVTTYNSLIVGFSLNGKSV 92
           SY+ K++IE+N  VG+ALINMYSRCG+IDEA+ +F  ++ RDV TYN++I G S+NGKS 
Sbjct: 266 SYMRKFEIELNLFVGNALINMYSRCGSIDEAQTVFDEMKDRDVITYNTMISGLSMNGKSR 325

Query: 91  EAVQIFQRMVSGGIKPTNITFTAVLNACS 5
           +A+++F+ MV   ++PTN+TF  VLNACS
Sbjct: 326 QAIELFRVMVGRRLRPTNVTFVGVLNACS 354


>ref|XP_003635064.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g59200, chloroplastic-like [Vitis vinifera]
          Length = 650

 Score =  114 bits (286), Expect = 1e-23
 Identities = 50/89 (56%), Positives = 72/89 (80%)
 Frame = -1

Query: 271 SYVNKYDIEINHLVGSALINMYSRCGNIDEAEKIFCSLQQRDVTTYNSLIVGFSLNGKSV 92
           SY+ K++IE+N  VG+ALINMYSRCG+IDEA+ +F  ++ RDV TYN++I G S+NGKS 
Sbjct: 302 SYMRKFEIELNLFVGNALINMYSRCGSIDEAQTVFDEMKDRDVITYNTMISGLSMNGKSR 361

Query: 91  EAVQIFQRMVSGGIKPTNITFTAVLNACS 5
           +A+++F+ M+   ++PTN+TF  VLNACS
Sbjct: 362 QAIELFRVMIGRRLRPTNVTFVGVLNACS 390


>emb|CBI18728.3| unnamed protein product [Vitis vinifera]
          Length = 607

 Score =  114 bits (286), Expect = 1e-23
 Identities = 50/89 (56%), Positives = 72/89 (80%)
 Frame = -1

Query: 271 SYVNKYDIEINHLVGSALINMYSRCGNIDEAEKIFCSLQQRDVTTYNSLIVGFSLNGKSV 92
           SY+ K++IE+N  VG+ALINMYSRCG+IDEA+ +F  ++ RDV TYN++I G S+NGKS 
Sbjct: 259 SYMRKFEIELNLFVGNALINMYSRCGSIDEAQTVFDEMKDRDVITYNTMISGLSMNGKSR 318

Query: 91  EAVQIFQRMVSGGIKPTNITFTAVLNACS 5
           +A+++F+ M+   ++PTN+TF  VLNACS
Sbjct: 319 QAIELFRVMIGRRLRPTNVTFVGVLNACS 347


>gb|EOX93714.1| Tetratricopeptide repeat-like superfamily protein [Theobroma cacao]
          Length = 632

 Score =  112 bits (279), Expect = 7e-23
 Identities = 51/90 (56%), Positives = 72/90 (80%), Gaps = 1/90 (1%)
 Frame = -1

Query: 271 SYVNK-YDIEINHLVGSALINMYSRCGNIDEAEKIFCSLQQRDVTTYNSLIVGFSLNGKS 95
           SY+ K + I ++H VG ALINMYSRCG+IDEAE++F  +++R+V TYN +I G +++GKS
Sbjct: 283 SYMGKEHGIVLSHFVGGALINMYSRCGDIDEAERVFAMMKERNVITYNLMISGLAMHGKS 342

Query: 94  VEAVQIFQRMVSGGIKPTNITFTAVLNACS 5
           +EA++IFQ M+  G+ PT +TF AVLNACS
Sbjct: 343 IEAIEIFQVMIKKGLLPTGVTFVAVLNACS 372


>ref|XP_002527276.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223533369|gb|EEF35120.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 507

 Score =  108 bits (271), Expect = 6e-22
 Identities = 49/81 (60%), Positives = 67/81 (82%)
 Frame = -1

Query: 271 SYVNKYDIEINHLVGSALINMYSRCGNIDEAEKIFCSLQQRDVTTYNSLIVGFSLNGKSV 92
           SY+ KY I INH VG ALINMYSRCG+IDEA ++F  +++R+V TYNS+IVGFSL+GKS 
Sbjct: 391 SYMGKYGIGINHFVGGALINMYSRCGDIDEAWRVFEEMKERNVITYNSMIVGFSLHGKSS 450

Query: 91  EAVQIFQRMVSGGIKPTNITF 29
           EA+++F+ M   G++PT++TF
Sbjct: 451 EAIELFRGMTKQGLEPTSVTF 471


>ref|XP_003540936.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g59200, chloroplastic-like [Glycine max]
          Length = 629

 Score =  105 bits (263), Expect = 5e-21
 Identities = 47/89 (52%), Positives = 67/89 (75%)
 Frame = -1

Query: 271 SYVNKYDIEINHLVGSALINMYSRCGNIDEAEKIFCSLQQRDVTTYNSLIVGFSLNGKSV 92
           +Y+ K  +E+N  V  ALINMYSRCG+IDEA+ +F  ++ +DV+TYNS+I G +L+GKS+
Sbjct: 281 AYMRKCGVEVNRFVAGALINMYSRCGDIDEAQALFDGVRVKDVSTYNSMIGGLALHGKSI 340

Query: 91  EAVQIFQRMVSGGIKPTNITFTAVLNACS 5
           EAV++F  M+   ++P  ITF  VLNACS
Sbjct: 341 EAVELFSEMLKERVRPNGITFVGVLNACS 369


>ref|XP_004292328.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g59200, chloroplastic-like [Fragaria vesca subsp.
           vesca]
          Length = 625

 Score =  103 bits (258), Expect = 2e-20
 Identities = 47/88 (53%), Positives = 67/88 (76%)
 Frame = -1

Query: 268 YVNKYDIEINHLVGSALINMYSRCGNIDEAEKIFCSLQQRDVTTYNSLIVGFSLNGKSVE 89
           Y+ K  IE N++VG ALINMYSRCG+ID A ++F  +++RDV+TYNS+I G  ++GKS  
Sbjct: 278 YMEKNKIECNYIVGGALINMYSRCGDIDGAVEVFSWMKERDVSTYNSMIEGLGMHGKSTM 337

Query: 88  AVQIFQRMVSGGIKPTNITFTAVLNACS 5
           A+++F+ M   G++P +ITF  VLNACS
Sbjct: 338 AIEMFREMRERGLRPNSITFVKVLNACS 365


>gb|ESW23889.1| hypothetical protein PHAVU_004G084900g [Phaseolus vulgaris]
          Length = 632

 Score =  103 bits (256), Expect = 3e-20
 Identities = 46/89 (51%), Positives = 68/89 (76%)
 Frame = -1

Query: 271 SYVNKYDIEINHLVGSALINMYSRCGNIDEAEKIFCSLQQRDVTTYNSLIVGFSLNGKSV 92
           +Y+ K D+E+N  V  ALINMYSRCG+IDEA+ +F  ++ +DV+TYNS+I G +++GKS+
Sbjct: 284 AYLCKCDVEVNWFVAGALINMYSRCGDIDEAQVLFDEVKVKDVSTYNSMIRGLAMHGKSM 343

Query: 91  EAVQIFQRMVSGGIKPTNITFTAVLNACS 5
           EAV++F+ M+   ++P  ITF  VLN CS
Sbjct: 344 EAVELFREMLMQRVRPNGITFVGVLNGCS 372


>ref|XP_006401000.1| hypothetical protein EUTSA_v10015737mg [Eutrema salsugineum]
           gi|557102090|gb|ESQ42453.1| hypothetical protein
           EUTSA_v10015737mg [Eutrema salsugineum]
          Length = 533

 Score = 98.6 bits (244), Expect = 8e-19
 Identities = 43/89 (48%), Positives = 68/89 (76%)
 Frame = -1

Query: 271 SYVNKYDIEINHLVGSALINMYSRCGNIDEAEKIFCSLQQRDVTTYNSLIVGFSLNGKSV 92
           SYV    +E++  VG+ALINMYSRCG+I+EA+++F  +Q +DV +YN++I G +++G+S 
Sbjct: 278 SYVENEKMELSSFVGNALINMYSRCGDINEAKRVFRGMQDKDVISYNTMISGLAMHGESF 337

Query: 91  EAVQIFQRMVSGGIKPTNITFTAVLNACS 5
           EA++ F+ MV+ G +P  +T  A+LNACS
Sbjct: 338 EAIKEFRDMVNRGFRPNQVTLVALLNACS 366


>ref|XP_002864611.1| hypothetical protein ARALYDRAFT_496037 [Arabidopsis lyrata subsp.
           lyrata] gi|297310446|gb|EFH40870.1| hypothetical protein
           ARALYDRAFT_496037 [Arabidopsis lyrata subsp. lyrata]
          Length = 534

 Score = 97.1 bits (240), Expect = 2e-18
 Identities = 41/89 (46%), Positives = 68/89 (76%)
 Frame = -1

Query: 271 SYVNKYDIEINHLVGSALINMYSRCGNIDEAEKIFCSLQQRDVTTYNSLIVGFSLNGKSV 92
           S+V    +E+++ VG+ALINMYSRCG+I+ A+++F  ++ +DV +YN++I G +++G SV
Sbjct: 269 SFVENQKMELSNFVGNALINMYSRCGDINVAKRVFKGMRDKDVISYNTMISGLAMHGASV 328

Query: 91  EAVQIFQRMVSGGIKPTNITFTAVLNACS 5
           EA+ +F+ MV+ G +P  +T  A+LNACS
Sbjct: 329 EAINVFRDMVNRGFRPNQVTLVALLNACS 357


>ref|NP_200728.2| protein ORGANELLE TRANSCRIPT PROCESSING 80 [Arabidopsis thaliana]
           gi|75170817|sp|Q9FIF7.1|PP435_ARATH RecName:
           Full=Putative pentatricopeptide repeat-containing
           protein At5g59200, chloroplastic; Flags: Precursor
           gi|9759241|dbj|BAB09765.1| unnamed protein product
           [Arabidopsis thaliana] gi|332009773|gb|AED97156.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           thaliana]
          Length = 544

 Score = 95.9 bits (237), Expect = 5e-18
 Identities = 42/89 (47%), Positives = 67/89 (75%)
 Frame = -1

Query: 271 SYVNKYDIEINHLVGSALINMYSRCGNIDEAEKIFCSLQQRDVTTYNSLIVGFSLNGKSV 92
           S+V    +E+++ VG+ALINMYSRCG+I+EA ++F  ++ +DV +YN++I G +++G SV
Sbjct: 279 SFVENQRMELSNFVGNALINMYSRCGDINEARRVFRVMRDKDVISYNTMISGLAMHGASV 338

Query: 91  EAVQIFQRMVSGGIKPTNITFTAVLNACS 5
           EA+  F+ MV+ G +P  +T  A+LNACS
Sbjct: 339 EAINEFRDMVNRGFRPNQVTLVALLNACS 367


>ref|XP_002867972.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297313808|gb|EFH44231.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 535

 Score = 92.8 bits (229), Expect = 4e-17
 Identities = 42/88 (47%), Positives = 63/88 (71%)
 Frame = -1

Query: 268 YVNKYDIEINHLVGSALINMYSRCGNIDEAEKIFCSLQQRDVTTYNSLIVGFSLNGKSVE 89
           Y++K+ IEI   V +AL++MYS+CG ID+A ++F    +RDV+T+NS+I G S++G   +
Sbjct: 299 YIDKHGIEIEGFVATALVDMYSKCGKIDKALEVFRDTSKRDVSTWNSIITGLSVHGLGKD 358

Query: 88  AVQIFQRMVSGGIKPTNITFTAVLNACS 5
           A++IF  MV  G KP  ITF  VL+AC+
Sbjct: 359 ALEIFSEMVYEGFKPNGITFIGVLSACN 386


>ref|XP_003550993.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
           chloroplastic-like [Glycine max]
          Length = 628

 Score = 92.0 bits (227), Expect = 7e-17
 Identities = 40/89 (44%), Positives = 66/89 (74%)
 Frame = -1

Query: 271 SYVNKYDIEINHLVGSALINMYSRCGNIDEAEKIFCSLQQRDVTTYNSLIVGFSLNGKSV 92
           SYV    I++N  VG+AL++MY +CG++++A K+F  ++ +DV  +NS+I+G+ ++G S 
Sbjct: 280 SYVENNGIKVNVRVGTALVDMYCKCGSLEDARKVFDVMEGKDVVAWNSMIMGYGIHGFSD 339

Query: 91  EAVQIFQRMVSGGIKPTNITFTAVLNACS 5
           EA+Q+F  M   G+KP++ITF AVL AC+
Sbjct: 340 EALQLFHEMCCIGVKPSDITFVAVLTACA 368


>ref|XP_006282116.1| hypothetical protein CARUB_v10028364mg [Capsella rubella]
           gi|482550820|gb|EOA15014.1| hypothetical protein
           CARUB_v10028364mg [Capsella rubella]
          Length = 550

 Score = 91.7 bits (226), Expect = 9e-17
 Identities = 39/89 (43%), Positives = 66/89 (74%)
 Frame = -1

Query: 271 SYVNKYDIEINHLVGSALINMYSRCGNIDEAEKIFCSLQQRDVTTYNSLIVGFSLNGKSV 92
           S+V    +++++ VG+ALINMY RCG+I+EA+++F  ++ +DV +YN++I G +++G S 
Sbjct: 279 SFVENRKMDLSNYVGNALINMYCRCGDINEAKRVFRGMRDKDVISYNTMISGLAMHGASF 338

Query: 91  EAVQIFQRMVSGGIKPTNITFTAVLNACS 5
           EA+  F+ MV+ G +P  +T  A+LNACS
Sbjct: 339 EAINEFRDMVNTGFRPNQVTLVALLNACS 367